BLASTX nr result

ID: Coptis24_contig00024186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024186
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]    75   2e-21
emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]    71   6e-21
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    71   6e-21
emb|CAN81818.1| hypothetical protein VITISV_009635 [Vitis vinifera]    71   6e-21
emb|CAN72359.1| hypothetical protein VITISV_000131 [Vitis vinifera]    71   6e-21

>emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]
          Length = 1532

 Score = 75.1 bits (183), Expect(2) = 2e-21
 Identities = 34/61 (55%), Positives = 44/61 (72%)
 Frame = -2

Query: 218  KSSKGIRQGDRFPIFFFILVVEVLGRMISRANSLGVFDGFHVGHDRVRISHLQFADDTLV 39
            K+S+G+RQGD    F F +V +VL RM+ RA    VF+GF VG +R R+SHLQFADDT+ 
Sbjct: 1089 KASRGLRQGDPLSPFLFTIVADVLSRMLLRAEERNVFEGFRVGRNRTRVSHLQFADDTIF 1148

Query: 38   F 36
            F
Sbjct: 1149 F 1149



 Score = 52.0 bits (123), Expect(2) = 2e-21
 Identities = 19/38 (50%), Positives = 30/38 (78%)
 Frame = -3

Query: 316  RMGFGVKWRKWVRKCISTVSFSVLVNGSPAGFLRVLKG 203
            + GF  KWRKW+R C+S+VSF++LVNG+  G+++  +G
Sbjct: 1056 KKGFNPKWRKWIRGCLSSVSFAILVNGNAKGWVKASRG 1093


>emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]
          Length = 1882

 Score = 71.2 bits (173), Expect(2) = 6e-21
 Identities = 32/61 (52%), Positives = 43/61 (70%)
 Frame = -2

Query: 218  KSSKGIRQGDRFPIFFFILVVEVLGRMISRANSLGVFDGFHVGHDRVRISHLQFADDTLV 39
            K+S+G+RQGD    F F +V +VL RM+ +A    V +GF VG +R R+SHLQFADDT+ 
Sbjct: 1296 KASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHLQFADDTIF 1355

Query: 38   F 36
            F
Sbjct: 1356 F 1356



 Score = 54.3 bits (129), Expect(2) = 6e-21
 Identities = 20/36 (55%), Positives = 31/36 (86%)
 Frame = -3

Query: 310  GFGVKWRKWVRKCISTVSFSVLVNGSPAGFLRVLKG 203
            GFG++WRKW+R C+S+VSF+VLVNG+  G+++  +G
Sbjct: 1265 GFGIRWRKWMRGCLSSVSFAVLVNGNAKGWVKASRG 1300


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 71.2 bits (173), Expect(2) = 6e-21
 Identities = 32/61 (52%), Positives = 43/61 (70%)
 Frame = -2

Query: 218  KSSKGIRQGDRFPIFFFILVVEVLGRMISRANSLGVFDGFHVGHDRVRISHLQFADDTLV 39
            K+S+G+RQGD    F F +V +VL RM+ +A    V +GF VG +R R+SHLQFADDT+ 
Sbjct: 1462 KASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHLQFADDTIF 1521

Query: 38   F 36
            F
Sbjct: 1522 F 1522



 Score = 54.3 bits (129), Expect(2) = 6e-21
 Identities = 20/36 (55%), Positives = 31/36 (86%)
 Frame = -3

Query: 310  GFGVKWRKWVRKCISTVSFSVLVNGSPAGFLRVLKG 203
            GFG++WRKW+R C+S+VSF+VLVNG+  G+++  +G
Sbjct: 1431 GFGIRWRKWMRGCLSSVSFAVLVNGNAKGWVKASRG 1466


>emb|CAN81818.1| hypothetical protein VITISV_009635 [Vitis vinifera]
          Length = 1014

 Score = 71.2 bits (173), Expect(2) = 6e-21
 Identities = 32/61 (52%), Positives = 43/61 (70%)
 Frame = -2

Query: 218 KSSKGIRQGDRFPIFFFILVVEVLGRMISRANSLGVFDGFHVGHDRVRISHLQFADDTLV 39
           K+S+G+RQGD    F F +V +VL RM+ +A    V +GF VG +R R+SHLQFADDT+ 
Sbjct: 186 KASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHLQFADDTIF 245

Query: 38  F 36
           F
Sbjct: 246 F 246



 Score = 54.3 bits (129), Expect(2) = 6e-21
 Identities = 20/36 (55%), Positives = 31/36 (86%)
 Frame = -3

Query: 310 GFGVKWRKWVRKCISTVSFSVLVNGSPAGFLRVLKG 203
           GFG++WRKW+R C+S+VSF+VLVNG+  G+++  +G
Sbjct: 155 GFGIRWRKWMRGCLSSVSFAVLVNGNAKGWVKASRG 190


>emb|CAN72359.1| hypothetical protein VITISV_000131 [Vitis vinifera]
          Length = 772

 Score = 71.2 bits (173), Expect(2) = 6e-21
 Identities = 32/61 (52%), Positives = 43/61 (70%)
 Frame = -2

Query: 218 KSSKGIRQGDRFPIFFFILVVEVLGRMISRANSLGVFDGFHVGHDRVRISHLQFADDTLV 39
           K+S+G+RQGD    F F +V +VL RM+ +A    V +GF VG +R R+SHLQFADDT+ 
Sbjct: 186 KASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHLQFADDTIF 245

Query: 38  F 36
           F
Sbjct: 246 F 246



 Score = 54.3 bits (129), Expect(2) = 6e-21
 Identities = 20/36 (55%), Positives = 31/36 (86%)
 Frame = -3

Query: 310 GFGVKWRKWVRKCISTVSFSVLVNGSPAGFLRVLKG 203
           GFG++WRKW+R C+S+VSF+VLVNG+  G+++  +G
Sbjct: 155 GFGIRWRKWMRGCLSSVSFAVLVNGNAKGWVKASRG 190


Top