BLASTX nr result
ID: Coptis24_contig00024175
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024175 (216 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|2... 135 4e-30 ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2... 130 1e-28 ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [V... 127 9e-28 ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [V... 127 9e-28 ref|XP_002285341.2| PREDICTED: topless-related protein 4-like is... 127 9e-28 >ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|222854044|gb|EEE91591.1| predicted protein [Populus trichocarpa] Length = 1132 Score = 135 bits (339), Expect = 4e-30 Identities = 61/72 (84%), Positives = 68/72 (94%) Frame = +1 Query: 1 GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180 G+AILALASNAVHKLWKWQRN+RNP+GKA++ PPQLWQPSSGILMTN+ S+ NPEDAVP Sbjct: 785 GVAILALASNAVHKLWKWQRNDRNPSGKANASVPPQLWQPSSGILMTNDISDTNPEDAVP 844 Query: 181 CFALSKNDSYVM 216 CFALSKNDSYVM Sbjct: 845 CFALSKNDSYVM 856 >ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1| predicted protein [Populus trichocarpa] Length = 1126 Score = 130 bits (327), Expect = 1e-28 Identities = 60/72 (83%), Positives = 66/72 (91%) Frame = +1 Query: 1 GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180 G+AILALASNAVHKLWKWQRN+RN GKA++ PPQLWQPSSGILMTN+ S+ NPEDAVP Sbjct: 779 GVAILALASNAVHKLWKWQRNDRNLPGKATASVPPQLWQPSSGILMTNDISDTNPEDAVP 838 Query: 181 CFALSKNDSYVM 216 CFALSKNDSYVM Sbjct: 839 CFALSKNDSYVM 850 >ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [Vitis vinifera] Length = 1123 Score = 127 bits (319), Expect = 9e-28 Identities = 60/72 (83%), Positives = 64/72 (88%) Frame = +1 Query: 1 GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180 G AILALASNAVHKLWKWQRN+RN T KA++ PQLWQPSSGILMTNE S+ NPEDAVP Sbjct: 777 GFAILALASNAVHKLWKWQRNDRNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVP 836 Query: 181 CFALSKNDSYVM 216 CFALSKNDSYVM Sbjct: 837 CFALSKNDSYVM 848 >ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [Vitis vinifera] Length = 1123 Score = 127 bits (319), Expect = 9e-28 Identities = 60/72 (83%), Positives = 64/72 (88%) Frame = +1 Query: 1 GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180 G AILALASNAVHKLWKWQRN+RN T KA++ PQLWQPSSGILMTNE S+ NPEDAVP Sbjct: 777 GFAILALASNAVHKLWKWQRNDRNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVP 836 Query: 181 CFALSKNDSYVM 216 CFALSKNDSYVM Sbjct: 837 CFALSKNDSYVM 848 >ref|XP_002285341.2| PREDICTED: topless-related protein 4-like isoform 1 [Vitis vinifera] gi|297738983|emb|CBI28228.3| unnamed protein product [Vitis vinifera] Length = 1133 Score = 127 bits (319), Expect = 9e-28 Identities = 60/72 (83%), Positives = 64/72 (88%) Frame = +1 Query: 1 GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180 G AILALASNAVHKLWKWQRN+RN T KA++ PQLWQPSSGILMTNE S+ NPEDAVP Sbjct: 787 GFAILALASNAVHKLWKWQRNDRNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVP 846 Query: 181 CFALSKNDSYVM 216 CFALSKNDSYVM Sbjct: 847 CFALSKNDSYVM 858