BLASTX nr result

ID: Coptis24_contig00024175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024175
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30
ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [V...   127   9e-28
ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [V...   127   9e-28
ref|XP_002285341.2| PREDICTED: topless-related protein 4-like is...   127   9e-28

>ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|222854044|gb|EEE91591.1|
            predicted protein [Populus trichocarpa]
          Length = 1132

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/72 (84%), Positives = 68/72 (94%)
 Frame = +1

Query: 1    GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180
            G+AILALASNAVHKLWKWQRN+RNP+GKA++  PPQLWQPSSGILMTN+ S+ NPEDAVP
Sbjct: 785  GVAILALASNAVHKLWKWQRNDRNPSGKANASVPPQLWQPSSGILMTNDISDTNPEDAVP 844

Query: 181  CFALSKNDSYVM 216
            CFALSKNDSYVM
Sbjct: 845  CFALSKNDSYVM 856


>ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1|
           predicted protein [Populus trichocarpa]
          Length = 1126

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = +1

Query: 1   GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180
           G+AILALASNAVHKLWKWQRN+RN  GKA++  PPQLWQPSSGILMTN+ S+ NPEDAVP
Sbjct: 779 GVAILALASNAVHKLWKWQRNDRNLPGKATASVPPQLWQPSSGILMTNDISDTNPEDAVP 838

Query: 181 CFALSKNDSYVM 216
           CFALSKNDSYVM
Sbjct: 839 CFALSKNDSYVM 850


>ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/72 (83%), Positives = 64/72 (88%)
 Frame = +1

Query: 1   GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180
           G AILALASNAVHKLWKWQRN+RN T KA++   PQLWQPSSGILMTNE S+ NPEDAVP
Sbjct: 777 GFAILALASNAVHKLWKWQRNDRNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVP 836

Query: 181 CFALSKNDSYVM 216
           CFALSKNDSYVM
Sbjct: 837 CFALSKNDSYVM 848


>ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/72 (83%), Positives = 64/72 (88%)
 Frame = +1

Query: 1   GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180
           G AILALASNAVHKLWKWQRN+RN T KA++   PQLWQPSSGILMTNE S+ NPEDAVP
Sbjct: 777 GFAILALASNAVHKLWKWQRNDRNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVP 836

Query: 181 CFALSKNDSYVM 216
           CFALSKNDSYVM
Sbjct: 837 CFALSKNDSYVM 848


>ref|XP_002285341.2| PREDICTED: topless-related protein 4-like isoform 1 [Vitis vinifera]
            gi|297738983|emb|CBI28228.3| unnamed protein product
            [Vitis vinifera]
          Length = 1133

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/72 (83%), Positives = 64/72 (88%)
 Frame = +1

Query: 1    GLAILALASNAVHKLWKWQRNERNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVP 180
            G AILALASNAVHKLWKWQRN+RN T KA++   PQLWQPSSGILMTNE S+ NPEDAVP
Sbjct: 787  GFAILALASNAVHKLWKWQRNDRNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVP 846

Query: 181  CFALSKNDSYVM 216
            CFALSKNDSYVM
Sbjct: 847  CFALSKNDSYVM 858


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