BLASTX nr result

ID: Coptis24_contig00024173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024173
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60628.1| hypothetical protein VITISV_018875 [Vitis vinifera]    49   4e-10
emb|CAN83120.1| hypothetical protein VITISV_043394 [Vitis vinifera]    46   7e-10
emb|CAN65013.1| hypothetical protein VITISV_027352 [Vitis vinifera]    50   9e-10
emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]    52   1e-09
emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera]    46   2e-09

>emb|CAN60628.1| hypothetical protein VITISV_018875 [Vitis vinifera]
          Length = 583

 Score = 48.9 bits (115), Expect(3) = 4e-10
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = +1

Query: 265 EKLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVL 444
           EK G E +GW +N    T+   + K I+   D     + FK+G  T+VRFW D WC +  
Sbjct: 286 EKFGQEGLGWRTNEARGTFGVGVWKEILKXADWCWDNIEFKVGKGTKVRFWTDHWCGNAA 345

Query: 445 L 447
           L
Sbjct: 346 L 346



 Score = 35.8 bits (81), Expect(3) = 4e-10
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 92  LEKIMRDFLWGAMGDSHRYQLIYWDSVC 175
           LEK+ RDFLWG      +  LI W++VC
Sbjct: 217 LEKLQRDFLWGGGSLERKVHLINWEAVC 244



 Score = 24.3 bits (51), Expect(3) = 4e-10
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 192 VGFRGLKEVNETLLGKWI 245
           +G R +  +N+ LLGKW+
Sbjct: 252 LGIRRIARLNKVLLGKWL 269


>emb|CAN83120.1| hypothetical protein VITISV_043394 [Vitis vinifera]
          Length = 1596

 Score = 46.2 bits (108), Expect(3) = 7e-10
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = +1

Query: 268  KLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVLL 447
            K G E  GW + +    +   + K IM   D    +++FK+G  T++RFW+D WC  V L
Sbjct: 1304 KYGQEEFGWRTKKVNGAFGVGVWKEIMKEADWCWDKMNFKVGKGTKIRFWKDPWCGEVEL 1363



 Score = 36.6 bits (83), Expect(3) = 7e-10
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 92   LEKIMRDFLWGAMGDSHRYQLIYWDSVCI 178
            LEK+ RDFLWG      +  L+ W+ VC+
Sbjct: 1234 LEKLQRDFLWGGGSTERKAHLVNWERVCV 1262



 Score = 25.4 bits (54), Expect(3) = 7e-10
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 192  VGFRGLKEVNETLLGKWICDCSLVRE 269
            +G R L  +N+ LLGKW+   +  RE
Sbjct: 1269 LGLRKLVPLNKALLGKWVWRFAHARE 1294


>emb|CAN65013.1| hypothetical protein VITISV_027352 [Vitis vinifera]
          Length = 503

 Score = 50.1 bits (118), Expect(3) = 9e-10
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = +1

Query: 265 EKLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVL 444
           EK G E +GW +N    T+   + K I+   D     + FK+G  T+VRFW D WC +  
Sbjct: 75  EKFGQEGLGWRTNEAXGTFGVGVWKEILKEADWCWDNIEFKVGKGTKVRFWTDHWCGNAX 134

Query: 445 L 447
           L
Sbjct: 135 L 135



 Score = 34.7 bits (78), Expect(3) = 9e-10
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 92  LEKIMRDFLWGAMGDSHRYQLIYWDSVC 175
           LEK+ RDFLWG      +  LI W+ VC
Sbjct: 6   LEKLQRDFLWGGGSLERKIHLINWEVVC 33



 Score = 23.1 bits (48), Expect(3) = 9e-10
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 192 VGFRGLKEVNETLLGKWI 245
           +G R +  +N+ LLGKW+
Sbjct: 41  LGIRRIALLNKVLLGKWL 58


>emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]
          Length = 996

 Score = 51.6 bits (122), Expect(3) = 1e-09
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = +1

Query: 268 KLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVLL 447
           K G E  GW + +T  T+   + K IM  KD     ++F++G+ TR+RFW D WC   +L
Sbjct: 740 KYGQEGFGWMTKKTNGTFGVGVWKEIMKEKDWCWENMAFRMGNGTRIRFWNDLWCGCTVL 799



 Score = 30.4 bits (67), Expect(3) = 1e-09
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 92  LEKIMRDFLWGAMGDSHRYQLIYWDSVC 175
           LEK+ RDFLWG      +   + W  VC
Sbjct: 670 LEKLQRDFLWGGGNLERKVHNVNWKIVC 697



 Score = 25.0 bits (53), Expect(3) = 1e-09
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 192 VGFRGLKEVNETLLGKWI 245
           +G R L  +N+ LLGKWI
Sbjct: 705 LGLRKLVPLNKALLGKWI 722


>emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera]
          Length = 1385

 Score = 46.2 bits (108), Expect(3) = 2e-09
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = +1

Query: 268  KLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVLL 447
            K G E  GW + +    +   + K IM   D    +++FK+G  T++RFW+D WC  V L
Sbjct: 1105 KYGQEEFGWRTKKVNGAFGVGVWKEIMKEADWCWDKMNFKVGKGTKIRFWKDXWCGEVEL 1164



 Score = 35.8 bits (81), Expect(3) = 2e-09
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 92   LEKIMRDFLWGAMGDSHRYQLIYWDSVCI 178
            LEK+ RDFLWG      +  L+ W+ VC+
Sbjct: 1035 LEKLQRDFLWGGGSMERKAHLVNWERVCV 1063



 Score = 24.3 bits (51), Expect(3) = 2e-09
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 192  VGFRGLKEVNETLLGKWI 245
            +G R L  +N+ LLGKW+
Sbjct: 1070 LGLRKLIPLNKALLGKWV 1087


Top