BLASTX nr result
ID: Coptis24_contig00024173
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024173 (614 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN60628.1| hypothetical protein VITISV_018875 [Vitis vinifera] 49 4e-10 emb|CAN83120.1| hypothetical protein VITISV_043394 [Vitis vinifera] 46 7e-10 emb|CAN65013.1| hypothetical protein VITISV_027352 [Vitis vinifera] 50 9e-10 emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera] 52 1e-09 emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera] 46 2e-09 >emb|CAN60628.1| hypothetical protein VITISV_018875 [Vitis vinifera] Length = 583 Score = 48.9 bits (115), Expect(3) = 4e-10 Identities = 23/61 (37%), Positives = 32/61 (52%) Frame = +1 Query: 265 EKLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVL 444 EK G E +GW +N T+ + K I+ D + FK+G T+VRFW D WC + Sbjct: 286 EKFGQEGLGWRTNEARGTFGVGVWKEILKXADWCWDNIEFKVGKGTKVRFWTDHWCGNAA 345 Query: 445 L 447 L Sbjct: 346 L 346 Score = 35.8 bits (81), Expect(3) = 4e-10 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 Query: 92 LEKIMRDFLWGAMGDSHRYQLIYWDSVC 175 LEK+ RDFLWG + LI W++VC Sbjct: 217 LEKLQRDFLWGGGSLERKVHLINWEAVC 244 Score = 24.3 bits (51), Expect(3) = 4e-10 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = +3 Query: 192 VGFRGLKEVNETLLGKWI 245 +G R + +N+ LLGKW+ Sbjct: 252 LGIRRIARLNKVLLGKWL 269 >emb|CAN83120.1| hypothetical protein VITISV_043394 [Vitis vinifera] Length = 1596 Score = 46.2 bits (108), Expect(3) = 7e-10 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = +1 Query: 268 KLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVLL 447 K G E GW + + + + K IM D +++FK+G T++RFW+D WC V L Sbjct: 1304 KYGQEEFGWRTKKVNGAFGVGVWKEIMKEADWCWDKMNFKVGKGTKIRFWKDPWCGEVEL 1363 Score = 36.6 bits (83), Expect(3) = 7e-10 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 92 LEKIMRDFLWGAMGDSHRYQLIYWDSVCI 178 LEK+ RDFLWG + L+ W+ VC+ Sbjct: 1234 LEKLQRDFLWGGGSTERKAHLVNWERVCV 1262 Score = 25.4 bits (54), Expect(3) = 7e-10 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 192 VGFRGLKEVNETLLGKWICDCSLVRE 269 +G R L +N+ LLGKW+ + RE Sbjct: 1269 LGLRKLVPLNKALLGKWVWRFAHARE 1294 >emb|CAN65013.1| hypothetical protein VITISV_027352 [Vitis vinifera] Length = 503 Score = 50.1 bits (118), Expect(3) = 9e-10 Identities = 23/61 (37%), Positives = 32/61 (52%) Frame = +1 Query: 265 EKLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVL 444 EK G E +GW +N T+ + K I+ D + FK+G T+VRFW D WC + Sbjct: 75 EKFGQEGLGWRTNEAXGTFGVGVWKEILKEADWCWDNIEFKVGKGTKVRFWTDHWCGNAX 134 Query: 445 L 447 L Sbjct: 135 L 135 Score = 34.7 bits (78), Expect(3) = 9e-10 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +2 Query: 92 LEKIMRDFLWGAMGDSHRYQLIYWDSVC 175 LEK+ RDFLWG + LI W+ VC Sbjct: 6 LEKLQRDFLWGGGSLERKIHLINWEVVC 33 Score = 23.1 bits (48), Expect(3) = 9e-10 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = +3 Query: 192 VGFRGLKEVNETLLGKWI 245 +G R + +N+ LLGKW+ Sbjct: 41 LGIRRIALLNKVLLGKWL 58 >emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera] Length = 996 Score = 51.6 bits (122), Expect(3) = 1e-09 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = +1 Query: 268 KLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVLL 447 K G E GW + +T T+ + K IM KD ++F++G+ TR+RFW D WC +L Sbjct: 740 KYGQEGFGWMTKKTNGTFGVGVWKEIMKEKDWCWENMAFRMGNGTRIRFWNDLWCGCTVL 799 Score = 30.4 bits (67), Expect(3) = 1e-09 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +2 Query: 92 LEKIMRDFLWGAMGDSHRYQLIYWDSVC 175 LEK+ RDFLWG + + W VC Sbjct: 670 LEKLQRDFLWGGGNLERKVHNVNWKIVC 697 Score = 25.0 bits (53), Expect(3) = 1e-09 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 Query: 192 VGFRGLKEVNETLLGKWI 245 +G R L +N+ LLGKWI Sbjct: 705 LGLRKLVPLNKALLGKWI 722 >emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera] Length = 1385 Score = 46.2 bits (108), Expect(3) = 2e-09 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = +1 Query: 268 KLGLETMGWFSNRTVPTY*CSLRKAIMWNKDHI**RLSFKLGDDTRVRFWQDKWCAHVLL 447 K G E GW + + + + K IM D +++FK+G T++RFW+D WC V L Sbjct: 1105 KYGQEEFGWRTKKVNGAFGVGVWKEIMKEADWCWDKMNFKVGKGTKIRFWKDXWCGEVEL 1164 Score = 35.8 bits (81), Expect(3) = 2e-09 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 92 LEKIMRDFLWGAMGDSHRYQLIYWDSVCI 178 LEK+ RDFLWG + L+ W+ VC+ Sbjct: 1035 LEKLQRDFLWGGGSMERKAHLVNWERVCV 1063 Score = 24.3 bits (51), Expect(3) = 2e-09 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +3 Query: 192 VGFRGLKEVNETLLGKWI 245 +G R L +N+ LLGKW+ Sbjct: 1070 LGLRKLIPLNKALLGKWV 1087