BLASTX nr result

ID: Coptis24_contig00024168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024168
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279852.2| PREDICTED: uncharacterized protein LOC100258...   282   2e-73
emb|CBI34363.3| unnamed protein product [Vitis vinifera]              282   2e-73
ref|NP_001052138.1| Os04g0166600 [Oryza sativa Japonica Group] g...   266   1e-68
emb|CAD39573.2| OSJNBa0019G23.16 [Oryza sativa Japonica Group] g...   265   3e-68
ref|XP_002509833.1| conserved hypothetical protein [Ricinus comm...   262   1e-67

>ref|XP_002279852.2| PREDICTED: uncharacterized protein LOC100258615 [Vitis vinifera]
          Length = 242

 Score =  282 bits (721), Expect = 2e-73
 Identities = 151/233 (64%), Positives = 179/233 (76%), Gaps = 3/233 (1%)
 Frame = -3

Query: 977 MLVPEICSSRIVSPCREESGDDELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 798
           ML PE+CS+R++SP REESGD+ELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 797 WHWLVLKNGVEVKLQRNALMVLEPPTGNEVDDDDHELDNSYSSSDMGEKDNDFSSGLQYP 618
           WHWLVLKNGVEVKLQRNAL VLEPPTGNE +DDDH+ DNS SSSD+GEKDNDFSS +++ 
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEPPTGNE-EDDDHDFDNSSSSSDIGEKDNDFSSSIEFH 119

Query: 617 GLQYARRSKPRVR--LPKQCLSSAKSVGRN-NLKVQSNIHKPQPRLDLGKLGMSSLWRYC 447
            L     SKPR R   P    +S K   RN + +VQS I  PQP ++L KLG  SLWRYC
Sbjct: 120 KL-----SKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYC 174

Query: 446 KHYNLVYPNTSLTPGHSKEHLVNIVQRHFLSQRLDETQVILEFINAAKRLKMS 288
           K +N+     +L    S+E ++  VQ+HF +Q+++E  VI+ FI AAKRLK S
Sbjct: 175 KKFNI----GNLNSNSSREQMLKAVQQHFTAQQVEEVPVIMGFIRAAKRLKTS 223


>emb|CBI34363.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  282 bits (721), Expect = 2e-73
 Identities = 151/233 (64%), Positives = 179/233 (76%), Gaps = 3/233 (1%)
 Frame = -3

Query: 977 MLVPEICSSRIVSPCREESGDDELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 798
           ML PE+CS+R++SP REESGD+ELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 797 WHWLVLKNGVEVKLQRNALMVLEPPTGNEVDDDDHELDNSYSSSDMGEKDNDFSSGLQYP 618
           WHWLVLKNGVEVKLQRNAL VLEPPTGNE +DDDH+ DNS SSSD+GEKDNDFSS +++ 
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEPPTGNE-EDDDHDFDNSSSSSDIGEKDNDFSSSIEFH 119

Query: 617 GLQYARRSKPRVR--LPKQCLSSAKSVGRN-NLKVQSNIHKPQPRLDLGKLGMSSLWRYC 447
            L     SKPR R   P    +S K   RN + +VQS I  PQP ++L KLG  SLWRYC
Sbjct: 120 KL-----SKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYC 174

Query: 446 KHYNLVYPNTSLTPGHSKEHLVNIVQRHFLSQRLDETQVILEFINAAKRLKMS 288
           K +N+     +L    S+E ++  VQ+HF +Q+++E  VI+ FI AAKRLK S
Sbjct: 175 KKFNI----GNLNSNSSREQMLKAVQQHFTAQQVEEVPVIMGFIRAAKRLKTS 223


>ref|NP_001052138.1| Os04g0166600 [Oryza sativa Japonica Group]
           gi|113563709|dbj|BAF14052.1| Os04g0166600 [Oryza sativa
           Japonica Group] gi|215734821|dbj|BAG95543.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 221

 Score =  266 bits (680), Expect = 1e-68
 Identities = 149/229 (65%), Positives = 174/229 (75%), Gaps = 1/229 (0%)
 Frame = -3

Query: 977 MLVPEICSSRIVSPCREESGDDELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 798
           M+  E+CSSR++SP R ESGD+ELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG
Sbjct: 2   MMETELCSSRVLSPPRYESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 61

Query: 797 WHWLVLKNGVEVKLQRNALMVLEPPTGNEVDDDDHELDNSY-SSSDMGEKDNDFSSGLQY 621
           WHWLVLKNGVEVKLQRNAL VLEPPTGNE DDDD + +NS+ SSSDMG+KD D+SS    
Sbjct: 62  WHWLVLKNGVEVKLQRNALSVLEPPTGNE-DDDDIDGNNSFCSSSDMGDKDMDYSS---- 116

Query: 620 PGLQYARRSKPRVRLPKQCLSSAKSVGRNNLKVQSNIHKPQPRLDLGKLGMSSLWRYCKH 441
             ++Y + +KPRVR  +   S  KS  R N    +   K + R++L KLG  +LWRY KH
Sbjct: 117 --IEYHKPTKPRVRHTRPWSSCIKSSNRGNFHPST---KLRTRVNLTKLGTPTLWRYWKH 171

Query: 440 YNLVYPNTSLTPGHSKEHLVNIVQRHFLSQRLDETQVILEFINAAKRLK 294
           +NLV    S+ P  SKE L + VQ+HF SQ+LDE QVIL FI AAKRLK
Sbjct: 172 FNLV----SMNPNPSKEQLFHGVQQHFQSQQLDELQVILGFIQAAKRLK 216


>emb|CAD39573.2| OSJNBa0019G23.16 [Oryza sativa Japonica Group]
           gi|116311098|emb|CAH68026.1|
           OSIGBa0136O08-OSIGBa0153H12.4 [Oryza sativa Indica
           Group] gi|222628359|gb|EEE60491.1| hypothetical protein
           OsJ_13784 [Oryza sativa Japonica Group]
          Length = 219

 Score =  265 bits (676), Expect = 3e-68
 Identities = 148/225 (65%), Positives = 172/225 (76%), Gaps = 1/225 (0%)
 Frame = -3

Query: 965 EICSSRIVSPCREESGDDELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWL 786
           E+CSSR++SP R ESGD+ELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWL
Sbjct: 4   ELCSSRVLSPPRYESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWL 63

Query: 785 VLKNGVEVKLQRNALMVLEPPTGNEVDDDDHELDNSY-SSSDMGEKDNDFSSGLQYPGLQ 609
           VLKNGVEVKLQRNAL VLEPPTGNE DDDD + +NS+ SSSDMG+KD D+SS      ++
Sbjct: 64  VLKNGVEVKLQRNALSVLEPPTGNE-DDDDIDGNNSFCSSSDMGDKDMDYSS------IE 116

Query: 608 YARRSKPRVRLPKQCLSSAKSVGRNNLKVQSNIHKPQPRLDLGKLGMSSLWRYCKHYNLV 429
           Y + +KPRVR  +   S  KS  R N    +   K + R++L KLG  +LWRY KH+NLV
Sbjct: 117 YHKPTKPRVRHTRPWSSCIKSSNRGNFHPST---KLRTRVNLTKLGTPTLWRYWKHFNLV 173

Query: 428 YPNTSLTPGHSKEHLVNIVQRHFLSQRLDETQVILEFINAAKRLK 294
               S+ P  SKE L + VQ+HF SQ+LDE QVIL FI AAKRLK
Sbjct: 174 ----SMNPNPSKEQLFHGVQQHFQSQQLDELQVILGFIQAAKRLK 214


>ref|XP_002509833.1| conserved hypothetical protein [Ricinus communis]
           gi|223549732|gb|EEF51220.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  262 bits (670), Expect = 1e-67
 Identities = 146/234 (62%), Positives = 180/234 (76%), Gaps = 2/234 (0%)
 Frame = -3

Query: 977 MLVPEICSSRIVSPCREESGDDELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 798
           ML  E+  SR++SP REESGD+ELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG
Sbjct: 1   MLETELYPSRLLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 797 WHWLVLKNGVEVKLQRNALMVLEPPTGNEVDDDDHELDNSYSSSDMGEKDNDFSSGLQYP 618
           WHWLVLKNGVEVKLQRNAL VLE PTGNEV D+D++ D+S S SDMGEKD+DFSSG ++ 
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNEV-DEDNDFDSS-SGSDMGEKDHDFSSGGEFH 118

Query: 617 GLQYARRSKPRVRLPKQCLSSAKSVGRNNLK-VQSNIHKPQPRLDLGKLGMSSLWRYCKH 441
            +     SK RVR  + C+ S KS  R++ + VQS IH PQ +++L KLG  SL RYC+ 
Sbjct: 119 KI-----SKQRVRPMRPCMPSVKSTSRSSYRDVQSIIHPPQLKVNLAKLGTESLRRYCRR 173

Query: 440 YNLVYPNTSLTPGHSKEHLVNIVQRHFLSQ-RLDETQVILEFINAAKRLKMSDE 282
           +NLV     +    S+E ++N VQ+HF+SQ  +DE +VI EF +AAK+LK +D+
Sbjct: 174 FNLV----GIHSDASREQMLNAVQKHFISQPPVDEVRVIAEFAHAAKKLKPADK 223


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