BLASTX nr result

ID: Coptis24_contig00024162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024162
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM89397.1| glutamate/malate translocator [Nicotiana tabacum]      277   1e-72
ref|XP_002525819.1| 2-oxoglutarate/malate translocator, chloropl...   275   6e-72
gb|AAM89395.1| glutamate/malate translocator [Flaveria bidentis]      275   6e-72
ref|XP_002323748.1| 2-oxoglutarate/malate translocator [Populus ...   273   2e-71
dbj|BAJ34188.1| unnamed protein product [Thellungiella halophila]     272   4e-71

>gb|AAM89397.1| glutamate/malate translocator [Nicotiana tabacum]
          Length = 583

 Score =  277 bits (708), Expect = 1e-72
 Identities = 133/198 (67%), Positives = 155/198 (78%)
 Frame = +2

Query: 2   GPVTKNEWVMVGTMLLAVSLWIFGETIGVASVVAAMXXXXXXXXXXXXDWDDCLADKSAW 181
           GPVTKNEWVM+GTMLLAVSLW+FG+ +G+ASVVAAM            DWDDCL++KSAW
Sbjct: 373 GPVTKNEWVMIGTMLLAVSLWVFGDALGIASVVAAMLGLSILLLLGVLDWDDCLSEKSAW 432

Query: 182 DTLTWFAVLVGMASQLTNLGIVTWMSNCVAKFLQSFSLSRLASFGVLHAAYFLIHYIFAS 361
           DTL WFAVLVGMA QLTNLGIV WMS+CVAK LQ+ SLS  A+FGVL AAYF IHY+FAS
Sbjct: 433 DTLAWFAVLVGMAGQLTNLGIVGWMSSCVAKSLQALSLSWPAAFGVLQAAYFFIHYLFAS 492

Query: 362 QAAHIGALYSSFLAMQMASGVPGVLAALTLAFNTSLFGGLTHXXXXXXXXXXXXXXVDVP 541
           Q  H+GALYS+FLAM +ASGVPGVLAAL LA+NT+LFG LTH              VD+P
Sbjct: 493 QTGHVGALYSAFLAMHLASGVPGVLAALALAYNTNLFGALTHYSSGQAAVYFGAGYVDLP 552

Query: 542 NCFRLGFIMAIINAVIWG 595
           + F++GFIMA++NA IWG
Sbjct: 553 DVFKMGFIMALVNATIWG 570


>ref|XP_002525819.1| 2-oxoglutarate/malate translocator, chloroplast precursor, putative
           [Ricinus communis] gi|223534824|gb|EEF36513.1|
           2-oxoglutarate/malate translocator, chloroplast
           precursor, putative [Ricinus communis]
          Length = 337

 Score =  275 bits (702), Expect = 6e-72
 Identities = 131/198 (66%), Positives = 155/198 (78%)
 Frame = +2

Query: 2   GPVTKNEWVMVGTMLLAVSLWIFGETIGVASVVAAMXXXXXXXXXXXXDWDDCLADKSAW 181
           GPVTKNEWVMVGTMLLAVSLW+FG+ +G+ SVV AM            DWDDCL++KSAW
Sbjct: 127 GPVTKNEWVMVGTMLLAVSLWVFGDALGIPSVVTAMIGLSILLLLGVLDWDDCLSEKSAW 186

Query: 182 DTLTWFAVLVGMASQLTNLGIVTWMSNCVAKFLQSFSLSRLASFGVLHAAYFLIHYIFAS 361
           DTL WFAVLVGMA QLTNLGIVTWMS+CVAK LQS SLS  A+FGVL A+YF IHY+FAS
Sbjct: 187 DTLAWFAVLVGMAGQLTNLGIVTWMSDCVAKSLQSLSLSWPAAFGVLQASYFFIHYLFAS 246

Query: 362 QAAHIGALYSSFLAMQMASGVPGVLAALTLAFNTSLFGGLTHXXXXXXXXXXXXXXVDVP 541
           Q  H+GALYS+FLAM +A+GVPGVLAAL LA+NT+LFG +TH              VD+P
Sbjct: 247 QTGHVGALYSAFLAMHLAAGVPGVLAALALAYNTNLFGAITHYSSGQAAVYYGAGYVDLP 306

Query: 542 NCFRLGFIMAIINAVIWG 595
           + F++GF++A+INAVIWG
Sbjct: 307 DVFKMGFVIALINAVIWG 324


>gb|AAM89395.1| glutamate/malate translocator [Flaveria bidentis]
          Length = 563

 Score =  275 bits (702), Expect = 6e-72
 Identities = 133/197 (67%), Positives = 153/197 (77%)
 Frame = +2

Query: 2   GPVTKNEWVMVGTMLLAVSLWIFGETIGVASVVAAMXXXXXXXXXXXXDWDDCLADKSAW 181
           GPVT NEWVM+ TM+LAVSLW+FG+ IG+ SVV AM            +WDDCL++KSAW
Sbjct: 353 GPVTTNEWVMIATMVLAVSLWVFGDAIGIPSVVTAMLGLSILLLLGVLEWDDCLSEKSAW 412

Query: 182 DTLTWFAVLVGMASQLTNLGIVTWMSNCVAKFLQSFSLSRLASFGVLHAAYFLIHYIFAS 361
           DTL WFAVLVGMA QLTNLGIVTWMSNCVAKFLQSFSLS  A+FGVL  AYFLIHY+FAS
Sbjct: 413 DTLAWFAVLVGMAGQLTNLGIVTWMSNCVAKFLQSFSLSWPAAFGVLQGAYFLIHYMFAS 472

Query: 362 QAAHIGALYSSFLAMQMASGVPGVLAALTLAFNTSLFGGLTHXXXXXXXXXXXXXXVDVP 541
           Q  H+GALYS+FLAM +A+GVPGVLAAL LA+NT+LFG LTH              V++P
Sbjct: 473 QTGHVGALYSAFLAMNLAAGVPGVLAALALAYNTNLFGALTHYSSGQAAVYFGAGYVELP 532

Query: 542 NCFRLGFIMAIINAVIW 592
           + FR+GFIMA INAVIW
Sbjct: 533 DVFRIGFIMACINAVIW 549


>ref|XP_002323748.1| 2-oxoglutarate/malate translocator [Populus trichocarpa]
           gi|222866750|gb|EEF03881.1| 2-oxoglutarate/malate
           translocator [Populus trichocarpa]
          Length = 569

 Score =  273 bits (697), Expect = 2e-71
 Identities = 127/198 (64%), Positives = 155/198 (78%)
 Frame = +2

Query: 2   GPVTKNEWVMVGTMLLAVSLWIFGETIGVASVVAAMXXXXXXXXXXXXDWDDCLADKSAW 181
           GPVT+NEW+MVGTM+LAVSLW+FG+ +G+ SVVAAM            DWDDCL +KSAW
Sbjct: 359 GPVTRNEWIMVGTMVLAVSLWVFGDALGIPSVVAAMIGLSILLLLGVLDWDDCLIEKSAW 418

Query: 182 DTLTWFAVLVGMASQLTNLGIVTWMSNCVAKFLQSFSLSRLASFGVLHAAYFLIHYIFAS 361
           DTL WFAVLVGMA QLTNLG+VTWMS+CVAK LQS SLS  A+FG+L A+YFLIHY+FAS
Sbjct: 419 DTLVWFAVLVGMAGQLTNLGVVTWMSSCVAKVLQSVSLSWPAAFGILQASYFLIHYLFAS 478

Query: 362 QAAHIGALYSSFLAMQMASGVPGVLAALTLAFNTSLFGGLTHXXXXXXXXXXXXXXVDVP 541
           Q  H+GALYS+FLAM +A+GVPG+LAAL LA+NT+LFG +TH              VD+P
Sbjct: 479 QTGHVGALYSAFLAMHLAAGVPGILAALALAYNTNLFGAITHYSSGQAAVYYGAGYVDLP 538

Query: 542 NCFRLGFIMAIINAVIWG 595
           + F++GF MA+INA+IWG
Sbjct: 539 DVFKMGFTMALINAIIWG 556


>dbj|BAJ34188.1| unnamed protein product [Thellungiella halophila]
          Length = 561

 Score =  272 bits (695), Expect = 4e-71
 Identities = 130/198 (65%), Positives = 155/198 (78%)
 Frame = +2

Query: 2   GPVTKNEWVMVGTMLLAVSLWIFGETIGVASVVAAMXXXXXXXXXXXXDWDDCLADKSAW 181
           GPVTKNEW+MVGTMLLAV+LWI GET+G+ SVVAAM            +WDDCL++KSAW
Sbjct: 351 GPVTKNEWIMVGTMLLAVTLWICGETLGIPSVVAAMIGLSILLLLGVLNWDDCLSEKSAW 410

Query: 182 DTLTWFAVLVGMASQLTNLGIVTWMSNCVAKFLQSFSLSRLASFGVLHAAYFLIHYIFAS 361
           DTL WFAVLVGMA QLTNLG+VTWMS+CVAK LQS SLS  A+FG+L AAYF IHY+FAS
Sbjct: 411 DTLAWFAVLVGMAGQLTNLGVVTWMSDCVAKVLQSLSLSWPAAFGLLQAAYFFIHYLFAS 470

Query: 362 QAAHIGALYSSFLAMQMASGVPGVLAALTLAFNTSLFGGLTHXXXXXXXXXXXXXXVDVP 541
           Q  H+GAL+S+FLAM +A+GVPG+LAAL LA+NT+LFG LTH              VD+P
Sbjct: 471 QTGHVGALFSAFLAMNIAAGVPGILAALALAYNTNLFGALTHYSSGQAAVYYGAGYVDLP 530

Query: 542 NCFRLGFIMAIINAVIWG 595
           + F++GF+MA INAVIWG
Sbjct: 531 DVFKIGFVMATINAVIWG 548


Top