BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024155
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...   259   2e-67
emb|CBI15839.3| unnamed protein product [Vitis vinifera]              259   2e-67
emb|CBI33923.3| unnamed protein product [Vitis vinifera]              252   3e-65
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   251   9e-65
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...   233   2e-59

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  259 bits (663), Expect = 2e-67
 Identities = 122/198 (61%), Positives = 156/198 (78%)
 Frame = -1

Query: 594 MFCKCGSIEAALSVFHGLSVKNIFCWNSIILGLGSFGYGEEAMTAFADMKKDGIKPDGVT 415
           M+CKCG++EAA+ VFHGLS KNIFCWNSII+GLG  G GEEA+ AF  M+K+GIKPDGVT
Sbjct: 249 MYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVT 308

Query: 414 FVGLLSGCSHSGLTSEGRHYFSQMLPVYGVEHGIEHYGCMVDLLGRAGLMKDSEELIQKM 235
           FVG+LSGCSHSGL S G+ YFS+ML VYG+E G+EHYGCMVDLLGRAG +K++ ELI+ M
Sbjct: 309 FVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAM 368

Query: 234 PMEAGPPLWGALLSACETHSNFELGERVAKRLIELEPRDVGPYVLLSNIYAREGKWDDVE 55
           PM+    + G+LL AC+ H + +LGE+V ++L+EL+P D G YV LSN+YA   +WDDV 
Sbjct: 369 PMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVN 428

Query: 54  KVRMMMREQGLQKAAGLS 1
             R +M ++G+ K  G S
Sbjct: 429 TCRKLMIKRGVHKTPGCS 446


>emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  259 bits (663), Expect = 2e-67
 Identities = 122/198 (61%), Positives = 156/198 (78%)
 Frame = -1

Query: 594 MFCKCGSIEAALSVFHGLSVKNIFCWNSIILGLGSFGYGEEAMTAFADMKKDGIKPDGVT 415
           M+CKCG++EAA+ VFHGLS KNIFCWNSII+GLG  G GEEA+ AF  M+K+GIKPDGVT
Sbjct: 177 MYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVT 236

Query: 414 FVGLLSGCSHSGLTSEGRHYFSQMLPVYGVEHGIEHYGCMVDLLGRAGLMKDSEELIQKM 235
           FVG+LSGCSHSGL S G+ YFS+ML VYG+E G+EHYGCMVDLLGRAG +K++ ELI+ M
Sbjct: 237 FVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAM 296

Query: 234 PMEAGPPLWGALLSACETHSNFELGERVAKRLIELEPRDVGPYVLLSNIYAREGKWDDVE 55
           PM+    + G+LL AC+ H + +LGE+V ++L+EL+P D G YV LSN+YA   +WDDV 
Sbjct: 297 PMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVN 356

Query: 54  KVRMMMREQGLQKAAGLS 1
             R +M ++G+ K  G S
Sbjct: 357 TCRKLMIKRGVHKTPGCS 374


>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  252 bits (644), Expect = 3e-65
 Identities = 122/198 (61%), Positives = 148/198 (74%)
 Frame = -1

Query: 594 MFCKCGSIEAALSVFHGLSVKNIFCWNSIILGLGSFGYGEEAMTAFADMKKDGIKPDGVT 415
           M+ KCG+++ A  VF  +S +++  WNS+I+G G  G  ++A+  F DM+K G  P+  T
Sbjct: 248 MYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDAT 307

Query: 414 FVGLLSGCSHSGLTSEGRHYFSQMLPVYGVEHGIEHYGCMVDLLGRAGLMKDSEELIQKM 235
           F+ +LS C+HSG+  EG  YF  M   Y +E  +EHYGCMVDLLGRAGLMKD EELI+KM
Sbjct: 308 FICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKM 367

Query: 234 PMEAGPPLWGALLSACETHSNFELGERVAKRLIELEPRDVGPYVLLSNIYAREGKWDDVE 55
           PME G  LWGALLSAC THSN EL E VAKRLIELEPRD+GPY+LLSNIYA EGKWDDVE
Sbjct: 368 PMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVE 427

Query: 54  KVRMMMREQGLQKAAGLS 1
            VR MM+E+GL K  GLS
Sbjct: 428 IVRKMMKERGLTKTTGLS 445


>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  251 bits (640), Expect = 9e-65
 Identities = 121/198 (61%), Positives = 147/198 (74%)
 Frame = -1

Query: 594 MFCKCGSIEAALSVFHGLSVKNIFCWNSIILGLGSFGYGEEAMTAFADMKKDGIKPDGVT 415
           M+ KCG+++ A  VF  +S +++  WNS+I+G G  G  ++A+  F DM+K G  P+  T
Sbjct: 397 MYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDAT 456

Query: 414 FVGLLSGCSHSGLTSEGRHYFSQMLPVYGVEHGIEHYGCMVDLLGRAGLMKDSEELIQKM 235
           F+ +LS C+HSG+  EG  YF  M   Y +E  +EHYGCMVDLLGRAGLMKD EELI+KM
Sbjct: 457 FICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKM 516

Query: 234 PMEAGPPLWGALLSACETHSNFELGERVAKRLIELEPRDVGPYVLLSNIYAREGKWDDVE 55
           PME G  LWGALLSAC THSN EL E VAKRLIELEPRD+GPY+LLSNIYA EGKWDDVE
Sbjct: 517 PMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVE 576

Query: 54  KVRMMMREQGLQKAAGLS 1
            VR MM+E+GL K  G S
Sbjct: 577 IVRKMMKERGLTKTTGFS 594


>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score =  233 bits (594), Expect = 2e-59
 Identities = 106/198 (53%), Positives = 149/198 (75%)
 Frame = -1

Query: 594 MFCKCGSIEAALSVFHGLSVKNIFCWNSIILGLGSFGYGEEAMTAFADMKKDGIKPDGVT 415
           M+ KCG+++ A  VF  + V+++  WNS+I+G G  G G++A+  F +M+K G +P+  T
Sbjct: 348 MYAKCGAMDLAKGVFDEMPVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDAT 407

Query: 414 FVGLLSGCSHSGLTSEGRHYFSQMLPVYGVEHGIEHYGCMVDLLGRAGLMKDSEELIQKM 235
           F+ +LS C+H+G+  EG  YF  M  VY +E  +EHYGCMVDLL RAGL+++SEELI+ +
Sbjct: 408 FISVLSACTHAGMVMEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMV 467

Query: 234 PMEAGPPLWGALLSACETHSNFELGERVAKRLIELEPRDVGPYVLLSNIYAREGKWDDVE 55
           P++AG  +WGALLS C  H + ELGE VAKR IELEP+D+GPY+LLSN+YA +G+WDDVE
Sbjct: 468 PVKAGSAIWGALLSGCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVE 527

Query: 54  KVRMMMREQGLQKAAGLS 1
            VR+M++E+GLQK A  S
Sbjct: 528 HVRLMIKEKGLQKEAASS 545