BLASTX nr result

ID: Coptis24_contig00024154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024154
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-16
ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [V...    70   5e-15
ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...    63   6e-14
ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus...    62   6e-14
ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [G...    62   1e-13

>ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|222864972|gb|EEF02103.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score = 65.5 bits (158), Expect(2) = 4e-16
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = -2

Query: 324 HPLALRYFLVSTHYRSPTNYSTSQLEIASVTVFYIYQTL 208
           HPLALR+FL+S HYRSP NYS SQLE +S  VFYIYQTL
Sbjct: 289 HPLALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTL 327



 Score = 43.9 bits (102), Expect(2) = 4e-16
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = -1

Query: 154 IASEEQKCIDNLCTDFKTKMSDDLHTQDFLNGAF 53
           I ++ QKCI  L  DF+TKMSDDL+T   L GAF
Sbjct: 355 ITADAQKCISRLHEDFETKMSDDLNTSPLLTGAF 388


>ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
           gi|296087508|emb|CBI34097.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score = 69.7 bits (169), Expect(2) = 5e-15
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = -2

Query: 324 HPLALRYFLVSTHYRSPTNYSTSQLEIASVTVFYIYQTL 208
           HPLALRYFL+ THYRSP NYS +QLEIAS  VFYIYQTL
Sbjct: 289 HPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTL 327



 Score = 35.8 bits (81), Expect(2) = 5e-15
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -1

Query: 154 IASEEQKCIDNLCTDFKTKMSDDLHTQDFLNGA 56
           I    + CI  L TDF+TKMSDDL T   LN +
Sbjct: 347 ITPAAKDCISKLQTDFQTKMSDDLSTPHILNAS 379


>ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
           gi|449508099|ref|XP_004163218.1| PREDICTED:
           cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 562

 Score = 62.8 bits (151), Expect(2) = 6e-14
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -2

Query: 324 HPLALRYFLVSTHYRSPTNYSTSQLEIASVTVFYIYQTL 208
           HPL LR+FL+S HYRSP NY+ SQL+ AS TV+YIYQT+
Sbjct: 288 HPLVLRHFLISAHYRSPLNYTVSQLDSASDTVYYIYQTM 326



 Score = 39.3 bits (90), Expect(2) = 6e-14
 Identities = 17/41 (41%), Positives = 28/41 (68%)
 Frame = -1

Query: 175 KMPSANEIASEEQKCIDNLCTDFKTKMSDDLHTQDFLNGAF 53
           K    + ++S  ++CI NL ++F+T+M+DDL+T   L GAF
Sbjct: 347 KTGKKDPVSSAAEECIINLRSEFQTRMADDLNTAHILTGAF 387


>ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
           gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 530

 Score = 61.6 bits (148), Expect(2) = 6e-14
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = -2

Query: 324 HPLALRYFLVSTHYRSPTNYSTSQLEIASVTVFYIYQTL 208
           HPLA+R+FL+S HYRSP NY+  QLE AS  +FYIYQTL
Sbjct: 288 HPLAVRHFLISAHYRSPLNYTVFQLESASDAIFYIYQTL 326



 Score = 40.4 bits (93), Expect(2) = 6e-14
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = -1

Query: 154 IASEEQKCIDNLCTDFKTKMSDDLHTQDFLNGAF 53
           I ++ +KCI+ L  +F+TKMSDDL T   L GAF
Sbjct: 354 ITADAKKCINKLRDEFETKMSDDLSTSHILTGAF 387


>ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
          Length = 553

 Score = 61.6 bits (148), Expect(2) = 1e-13
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -2

Query: 324 HPLALRYFLVSTHYRSPTNYSTSQLEIASVTVFYIYQTL 208
           HPLALR+FL+S HYRSP NYS SQLE +S  ++YI+QTL
Sbjct: 290 HPLALRHFLISAHYRSPLNYSISQLENSSDAIYYIFQTL 328



 Score = 39.3 bits (90), Expect(2) = 1e-13
 Identities = 21/41 (51%), Positives = 25/41 (60%)
 Frame = -1

Query: 178 KKMPSANEIASEEQKCIDNLCTDFKTKMSDDLHTQDFLNGA 56
           +K+P  NE A E   CI  L  +F+TKMSDDL T   L GA
Sbjct: 347 EKVPQINEAAKE---CIKKLNVEFQTKMSDDLQTPVILTGA 384


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