BLASTX nr result

ID: Coptis24_contig00024151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024151
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA56286.1| TPA: hypothetical protein ZEAMMB73_851729 [Zea m...   215   4e-54
ref|NP_001145103.1| uncharacterized protein LOC100278318 [Zea ma...   214   1e-53
emb|CBI17697.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_002456801.1| hypothetical protein SORBIDRAFT_03g043050 [S...   212   5e-53
ref|XP_004145682.1| PREDICTED: uncharacterized protein LOC101219...   207   9e-52

>tpg|DAA56286.1| TPA: hypothetical protein ZEAMMB73_851729 [Zea mays]
          Length = 138

 Score =  215 bits (548), Expect = 4e-54
 Identities = 106/138 (76%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
 Frame = +2

Query: 38  MMHALQRTLRSIHSTV-QPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLRVYSPAADSK 214
           M  AL   LR +H+   QPP+LTK +LHPPK VE+EFADGS F+LSAEFLRVYSPAADSK
Sbjct: 1   MAAALGAVLRRLHTAAAQPPRLTKFALHPPKFVEIEFADGSSFHLSAEFLRVYSPAADSK 60

Query: 215 IRSVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLGSNKFTHMRN 394
           IRSVGGEKVIFGRRHVGIMSAE VGNYG+RI+FDDLHKTGI+T+ Y +HLGSNKF+ MRN
Sbjct: 61  IRSVGGEKVIFGRRHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFSLMRN 120

Query: 395 YINILKKHGLSRDPQRTK 448
           YI  L+KHGLSRDPQR K
Sbjct: 121 YIRTLRKHGLSRDPQRRK 138


>ref|NP_001145103.1| uncharacterized protein LOC100278318 [Zea mays]
           gi|195651255|gb|ACG45095.1| hypothetical protein [Zea
           mays]
          Length = 138

 Score =  214 bits (544), Expect = 1e-53
 Identities = 105/138 (76%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
 Frame = +2

Query: 38  MMHALQRTLRSIHSTV-QPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLRVYSPAADSK 214
           M  AL   LR +H+   QPP+LTK +LHPPK VE+EFADGS F+LSAEFLRVYSPA DSK
Sbjct: 1   MAAALGAVLRRLHTAAAQPPRLTKFALHPPKFVEIEFADGSSFHLSAEFLRVYSPAVDSK 60

Query: 215 IRSVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLGSNKFTHMRN 394
           IRSVGGEKVIFGRRHVGIMSAE VGNYG+RI+FDDLHKTGI+T+ Y +HLGSNKF+ MRN
Sbjct: 61  IRSVGGEKVIFGRRHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFSLMRN 120

Query: 395 YINILKKHGLSRDPQRTK 448
           YI  L+KHGLSRDPQR K
Sbjct: 121 YIRTLRKHGLSRDPQRRK 138


>emb|CBI17697.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  213 bits (542), Expect = 2e-53
 Identities = 107/147 (72%), Positives = 123/147 (83%)
 Frame = +2

Query: 8   SNLVNVGEQAMMHALQRTLRSIHSTVQPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLR 187
           S  V    +AM+  L R +RSIH+T   P+LTK SLHPPK VE++F +GS FNLSAEFLR
Sbjct: 263 SRRVTNRREAMLARL-RGVRSIHTT---PRLTKFSLHPPKTVEVKFDNGSAFNLSAEFLR 318

Query: 188 VYSPAADSKIRSVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLG 367
           ++SPAADSK+RS+GGEKVIFGRRHVGIMSAE VGNYG+RI+FDDLHKTGIYT+ YFYHLG
Sbjct: 319 IHSPAADSKVRSIGGEKVIFGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYTWDYFYHLG 378

Query: 368 SNKFTHMRNYINILKKHGLSRDPQRTK 448
           SNKFT MRNYI  LKKHGL+RDP R K
Sbjct: 379 SNKFTLMRNYIKTLKKHGLNRDPPRRK 405


>ref|XP_002456801.1| hypothetical protein SORBIDRAFT_03g043050 [Sorghum bicolor]
           gi|241928776|gb|EES01921.1| hypothetical protein
           SORBIDRAFT_03g043050 [Sorghum bicolor]
          Length = 138

 Score =  212 bits (539), Expect = 5e-53
 Identities = 104/138 (75%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
 Frame = +2

Query: 38  MMHALQRTLRSIHSTV-QPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLRVYSPAADSK 214
           M  AL   +R +H+   QPP+LTK +LHPPK VE+EFADGS F+LSAEFLRVYSPAADSK
Sbjct: 1   MAAALGAVVRRLHTAAAQPPRLTKFALHPPKSVEIEFADGSSFHLSAEFLRVYSPAADSK 60

Query: 215 IRSVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLGSNKFTHMRN 394
           IRSVGGEKVIFGR+HVGIMSAE VGNYG+RI+FDDLHKTGI+T+ Y +HLGSNKF  MRN
Sbjct: 61  IRSVGGEKVIFGRQHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFGLMRN 120

Query: 395 YINILKKHGLSRDPQRTK 448
           YI  L+KHGLSRDPQR K
Sbjct: 121 YIRTLRKHGLSRDPQRRK 138


>ref|XP_004145682.1| PREDICTED: uncharacterized protein LOC101219823 [Cucumis sativus]
          Length = 136

 Score =  207 bits (528), Expect = 9e-52
 Identities = 97/136 (71%), Positives = 117/136 (86%)
 Frame = +2

Query: 41  MHALQRTLRSIHSTVQPPKLTKLSLHPPKCVEMEFADGSLFNLSAEFLRVYSPAADSKIR 220
           M  L R  R+IH+T+  P++T  +LH PK VE++FADGS+FNLSAEFLRVYSPAAD+KIR
Sbjct: 1   MLPLHRLFRTIHTTLDAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIR 60

Query: 221 SVGGEKVIFGRRHVGIMSAEVVGNYGIRIVFDDLHKTGIYTYSYFYHLGSNKFTHMRNYI 400
           S+GGEKVI GRRHVGIMSAE VGNYG+RI+FDDLH+TGIY++ YF+HLGSNKFT +RNY+
Sbjct: 61  SIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYV 120

Query: 401 NILKKHGLSRDPQRTK 448
             LKKHGLSRDP + K
Sbjct: 121 KTLKKHGLSRDPPKRK 136


Top