BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024130
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311390.1| predicted protein [Populus trichocarpa] gi|2...   225   6e-57
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
gb|AEP33759.1| organelle transcript processing 82, partial [Bras...   208   7e-52
ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   206   3e-51
gb|AEP33770.1| organelle transcript processing 82, partial [Raph...   206   5e-51

>ref|XP_002311390.1| predicted protein [Populus trichocarpa] gi|222851210|gb|EEE88757.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score =  225 bits (574), Expect = 6e-57
 Identities = 108/182 (59%), Positives = 143/182 (78%)
 Frame = +3

Query: 6   LFSEMLDGQIIPNEITFICVLAACSHSGLVDDGLRIFHSLVKESDITPTVEHYGCVVDIL 185
           LF++M++  I P+EIT+I +LAAC+HSGLVD GL+IF+ +V+     P ++HYGC+VD+L
Sbjct: 387 LFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLL 446

Query: 186 SRAGLLKDARQFINTMPMEANGSIWRTLLGSCKLYGDFELGMEVGRILIELEPLNDANYV 365
            RAGLL DA + + TMP++A+ +IWR LL +CKL+ + ELG +VGRILI++EP ND NYV
Sbjct: 447 GRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYV 506

Query: 366 LMSNIYAIGNRWDDVGTLRRIMKARGVRKSPGCSSIELDGVVHEFIAGDSLHPQSQDICE 545
           L SN+YA  NRWD  G LRR MK RG++K+PGCSSIEL+G VHEF++ D  HPQSQ I E
Sbjct: 507 LFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFVSRDHSHPQSQVIYE 566

Query: 546 LL 551
           LL
Sbjct: 567 LL 568


>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  213 bits (543), Expect = 2e-53
 Identities = 98/185 (52%), Positives = 137/185 (74%)
 Frame = +3

Query: 6   LFSEMLDGQIIPNEITFICVLAACSHSGLVDDGLRIFHSLVKESDITPTVEHYGCVVDIL 185
           LFSEM+   + PN +TFI +L ACSH GL+D+G R F S+  +  + P +EHYGCVVD+ 
Sbjct: 230 LFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLF 289

Query: 186 SRAGLLKDARQFINTMPMEANGSIWRTLLGSCKLYGDFELGMEVGRILIELEPLNDANYV 365
           SRAGLL++A +FI +MP++ NG +W  LLG CK++ + +L  E  + L EL+PLND  YV
Sbjct: 290 SRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYV 349

Query: 366 LMSNIYAIGNRWDDVGTLRRIMKARGVRKSPGCSSIELDGVVHEFIAGDSLHPQSQDICE 545
           ++SNIYA   RW+D   +R++MK RGV+K+ G SSI ++GVVHEF+AGD  HPQ++DIC+
Sbjct: 350 VISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICK 409

Query: 546 LLDKL 560
           + DKL
Sbjct: 410 IWDKL 414


>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  208 bits (530), Expect = 7e-52
 Identities = 94/185 (50%), Positives = 136/185 (73%)
 Frame = +3

Query: 6   LFSEMLDGQIIPNEITFICVLAACSHSGLVDDGLRIFHSLVKESDITPTVEHYGCVVDIL 185
           LFS M    I P++IT + +L+ACSHSGL+D G  IF S+ ++ +ITP +EHYGC++D+L
Sbjct: 407 LFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLL 466

Query: 186 SRAGLLKDARQFINTMPMEANGSIWRTLLGSCKLYGDFELGMEVGRILIELEPLNDANYV 365
             AGL K+A + I+ MPME +G IW +LL +CK++G+ EL     + L+E+EP N  +YV
Sbjct: 467 GHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYV 526

Query: 366 LMSNIYAIGNRWDDVGTLRRIMKARGVRKSPGCSSIELDGVVHEFIAGDSLHPQSQDICE 545
           L+SNIYA   RW+DV  +R ++  +G++K PGCSSIE+D VVHEFI GD LHPQS++I  
Sbjct: 527 LLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYR 586

Query: 546 LLDKL 560
           +L+++
Sbjct: 587 MLEEM 591


>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  206 bits (525), Expect = 3e-51
 Identities = 98/191 (51%), Positives = 135/191 (70%)
 Frame = +3

Query: 6   LFSEMLDGQIIPNEITFICVLAACSHSGLVDDGLRIFHSLVKESDITPTVEHYGCVVDIL 185
           LF +M   +  PN IT + VL+AC+HSG+VD+GLRIF+S+ +   I P +EHYGCVVD+L
Sbjct: 381 LFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLL 440

Query: 186 SRAGLLKDARQFINTMPMEANGSIWRTLLGSCKLYGDFELGMEVGRILIELEPLNDANYV 365
            RAGLL +A + + +MPME + ++W  LLG+C+ +GD ELG  VG+IL+ELEP N   Y 
Sbjct: 441 GRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYA 500

Query: 366 LMSNIYAIGNRWDDVGTLRRIMKARGVRKSPGCSSIELDGVVHEFIAGDSLHPQSQDICE 545
           L+SNIYA   RWDDV  +R++MK RGV+ S G S I+ DGVVHEF  GD  HPQ ++I  
Sbjct: 501 LLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYL 560

Query: 546 LLDKLARQFSV 578
           +L  + ++  +
Sbjct: 561 MLKNMIKRLKM 571


>gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  206 bits (523), Expect = 5e-51
 Identities = 91/185 (49%), Positives = 138/185 (74%)
 Frame = +3

Query: 6   LFSEMLDGQIIPNEITFICVLAACSHSGLVDDGLRIFHSLVKESDITPTVEHYGCVVDIL 185
           LFS M   ++ P++ITF+ +L+ACSHSGL+D G +IF S+ ++ ++TP +EHYGC++D+L
Sbjct: 391 LFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLL 450

Query: 186 SRAGLLKDARQFINTMPMEANGSIWRTLLGSCKLYGDFELGMEVGRILIELEPLNDANYV 365
             +GL K+A + I+TMPME +G IW +LL +CK +G+ EL     + LI++EP N  +YV
Sbjct: 451 GHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYV 510

Query: 366 LMSNIYAIGNRWDDVGTLRRIMKARGVRKSPGCSSIELDGVVHEFIAGDSLHPQSQDICE 545
           L+SNIYA   RW+DV  +R ++  +G++K PGCSSIE+D VVHEFI GD LHP+ ++I  
Sbjct: 511 LLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYH 570

Query: 546 LLDKL 560
           +L+++
Sbjct: 571 MLEEM 575