BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024128
         (2363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   194   6e-81
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   185   3e-78
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   171   2e-77
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...   199   5e-77
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...   171   2e-76

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  194 bits (493), Expect(3) = 6e-81
 Identities = 133/507 (26%), Positives = 228/507 (44%), Gaps = 18/507 (3%)
 Frame = +2

Query: 788  SILFNGGLIGFFAMERGLKQGDPIFPLLFAIAKDALSRGMHYLSQNNHL--RPITSIRGF 961
            S+  NG L G+F   RGL+QG  + P LF I  D LS+ +   +   H    P     G 
Sbjct: 639  SVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGL 698

Query: 962  AAPTHLLFADDIIIFSNGNIRYLRNIITLLESYEKASGQAMNKAKCKKFMGGFSQRRKDR 1141
               THL FADD+++ S+G IR +  II + + + K SG  ++  K   ++ G S   ++ 
Sbjct: 699  ---THLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNE 755

Query: 1142 VVYELGIKEGTLPEKYLGVPLNQKKVMRALVALVLDRVKRKLTSWTGSMMSFKGKIIFIN 1321
            V        G LP +YLG+PL  K++       +L++V++++ SWT   +S+ G++  I+
Sbjct: 756  VADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLIS 815

Query: 1322 LVLNSIPVYNVSIYKWSSSIIKEAEKTIRNFLWTGDPSQSRATTVSWDRVCKPLREGSLG 1501
             VL SI  + ++ ++     I+E EK    FLW+G    S    +SW  VCKP  EG LG
Sbjct: 816  SVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLG 875

Query: 1502 IRRLKDINSSMIMKMAWRILTEEDDFPTFLKLKYFNRDGDIIQYYKASS----IWPGIRA 1669
            +R LK+ N    +K+ W+I++  +        ++  R+    +  +  S    IW  +  
Sbjct: 876  LRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLK 935

Query: 1670 ALQEVKDRSLWVIGNGNKADLIRGNW------LGTTSLQAALNLSTSQLRGFNAKVSSIL 1831
              +  K  S   +GNG +      NW      L  T  +  ++L  S+          + 
Sbjct: 936  YREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLLERTGDRGLIDLGISR---------RMT 986

Query: 1832 VNNSWTIPTILQ---DMFDASGLDISKVHRTDPEQDDYLIW---SPNLKGVFSCKSAHNS 1993
            V  +WT     +   D+++     + K   T  E +D ++W   S   +  FS +   + 
Sbjct: 987  VEEAWTNRRQRRHRNDVYNVIEDALKKSWDTRTETEDKVLWRGKSDVFRTTFSTRDTWHH 1046

Query: 1994 IRRPANLIAWAKYIWNPYVHHKLAANTWKLLKKCAATDVMVQKKGIHMVSSCRFCKSNIE 2173
             R  +  + W K IW  +   K +  +W        T   +      + + C FC+  +E
Sbjct: 1047 TRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLE 1106

Query: 2174 SLQHILWECPFSKGLCRVWTSSRFQTQ 2254
            +  H+ + C F+  +        F+TQ
Sbjct: 1107 TRDHLFFTCSFTSVIWVDLARGIFKTQ 1133



 Score = 87.4 bits (215), Expect(3) = 6e-81
 Identities = 50/143 (34%), Positives = 78/143 (54%)
 Frame = +1

Query: 349 LPYNSSSLKSPVPGGLNANFITLIPKEKGAKKLTHFRPICMGNFLMKAITKIMQLRLNVI 528
           L   S   K  +P G+N+  + LIPK+  A+++  +RPI   N L K I+KI+  RL ++
Sbjct: 494 LAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLV 553

Query: 529 APKIISKEQVGFVPSRCSQATIGLASELFNELQIKRHGGNVAIKIDISQAYDTMS*EFLF 708
            PK I+  Q  FV  R     + LA+EL  +          AIKIDIS+A+D++   FL 
Sbjct: 554 LPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLI 613

Query: 709 GVLSKLGFSNIWMNWLKAIMESA 777
            V + LGF   +++W+   + +A
Sbjct: 614 NVFTILGFPREFIHWINICITTA 636



 Score = 69.7 bits (169), Expect(3) = 6e-81
 Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
 Frame = +3

Query: 6   FHNIYKIRQGASFITELHNDEGNILNDQDQIKSHILQFYEEKFKQVPTQQD----FHLLS 173
           FH     R+  + I E+ +++G +    D+IK+   +F+ E  + +P   +      L  
Sbjct: 376 FHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREFLQLIPNDFEGVTITELQQ 435

Query: 174 LIPNLISAKENYSLCKIPDYLEIQQAIFSMKANSSPGPDGFQGHFFHSCWDIIKQDTCAA 353
           L+P   S  +  SL +     EI++ +F M ++ SPGPDG+   FF + W+II  +   A
Sbjct: 436 LLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLA 495

Query: 354 IQFFFTQ 374
           +Q FFT+
Sbjct: 496 VQSFFTK 502


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  185 bits (470), Expect(3) = 3e-78
 Identities = 138/491 (28%), Positives = 216/491 (43%), Gaps = 10/491 (2%)
 Frame = +2

Query: 788  SILFNGGLIGFFAMERGLKQGDPIFPLLFAIAKDALSRGMHYLSQNNHLRPITSIRGFAA 967
            S L NG   G     RGL+QGDP+ P LF +  + LS       +   +  I   RG   
Sbjct: 557  SFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQ 616

Query: 968  PTHLLFADDIIIFSNGNIRYLRNIITLLESYEKASGQAMNKAKCK-KFMGGFSQRRKDRV 1144
              HLLFADD + F   N      +  +L+ YE ASGQ++N AK    F     Q  K RV
Sbjct: 617  VNHLLFADDTMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAITFSSKTPQDIKRRV 676

Query: 1145 VYELGIKEGTLPEKYLGVPLNQKKVMRALVALVLDRVKRKLTSWTGSMMSFKGKIIFINL 1324
               L I       KYLG+P +  +  R + + ++DR++++  SW+   +S  GK I +  
Sbjct: 677  KLSLRIDNEGGIGKYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAGKQILLKA 736

Query: 1325 VLNSIPVYNVSIYKWSSSIIKEAEKTIRNFLWTGDPSQSRATTVSWDRVCKPLREGSLGI 1504
            VL+S+P Y +  +K  +S+ K+ +  +  F W   P + +   VSWD++  P+ EG LG 
Sbjct: 737  VLSSMPSYAMMCFKLPASLCKQIQSVLTRFWWDSKPDKRKMAWVSWDKLTLPINEGGLGF 796

Query: 1505 RRLKDINSSMIMKMAWRILTEEDDFPTFLKL-KYFNRDGDI---IQYYKASSIWPGIRAA 1672
            R ++        K++WRIL E     + + L KY N    +        AS  W GI A 
Sbjct: 797  REIE-------AKLSWRILKEPHSLLSRVLLGKYCNTSSFMDCSASPSFASHGWRGILAG 849

Query: 1673 LQEVKDRSLWVIGNGNKADLIRGNWLGTTSLQAALNLSTSQLRGFNAKVSSILVNNSWTI 1852
               ++    W IG G+  ++    WL  +S Q  +   T   +  +          SW +
Sbjct: 850  RDLLRKGLGWSIGQGDSINVWTEAWLSPSSPQTPIGPPTETNKDLSVHDLICHDVKSWNV 909

Query: 1853 PTILQDMFDASGLDISKVHRTDPEQDDYLIWSPNLKGVFSCKSAH-----NSIRRPANLI 2017
              I + +       I K+        D L+W P   G ++ K+ +     NS        
Sbjct: 910  EAIRKHLPQYED-QIRKITINALPLQDSLVWLPVKSGEYTTKTGYALAKLNSFPASQLDF 968

Query: 2018 AWAKYIWNPYVHHKLAANTWKLLKKCAATDVMVQKKGIHMVSSCRFCKSNIESLQHILWE 2197
             W K IW  +   K+    WK +K        + ++ I    +C+ C    ES  H++  
Sbjct: 969  NWQKNIWKIHTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCKRC-GQTESSLHLMLL 1027

Query: 2198 CPFSKGLCRVW 2230
            CP++K   +VW
Sbjct: 1028 CPYAK---KVW 1035



 Score = 79.0 bits (193), Expect(3) = 3e-78
 Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = +1

Query: 394 LNANFITLIPKEKGAKKLTHFRPICMGNFLMKAITKIMQLRLNVIAPKIISKEQVGFVPS 573
           LN   +TLIPK    +K++ +RPI + N   K + KI+  RL     ++IS  Q  FVP 
Sbjct: 425 LNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPG 484

Query: 574 RCSQATIGLASELFNELQIK--RHGGNVAIKIDISQAYDTMS*EFLFGVLSKLGFSNIWM 747
           R     + +  E+ + L++   +   ++AIK D+S+AYD +   FL  VL +LGF + W+
Sbjct: 485 RAIADNVLITHEILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWI 544

Query: 748 NWLKAIMESAHKDLYSF 798
            W   +M+      YSF
Sbjct: 545 RW---VMQCVCTVSYSF 558



 Score = 78.2 bits (191), Expect(3) = 3e-78
 Identities = 40/122 (32%), Positives = 67/122 (54%)
 Frame = +3

Query: 3   YFHNIYKIRQGASFITELHNDEGNILNDQDQIKSHILQFYEEKFKQVPTQQDFHLLSLIP 182
           YFH   + R+  + ++ + +  G   ++++QI S I  +++  F          +   + 
Sbjct: 295 YFHATTRTRRMLNNLSVIEDGSGQEFHEEEQIASTISSYFQNIFTTSNNSDLQVVQEALS 354

Query: 183 NLISAKENYSLCKIPDYLEIQQAIFSMKANSSPGPDGFQGHFFHSCWDIIKQDTCAAIQF 362
            +IS+  N  L KI   LEI++A+FS+ A+ +PGPDGF   FFH+ WDII+ D    I+ 
Sbjct: 355 PIISSHCNEELIKISSLLEIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRS 414

Query: 363 FF 368
           FF
Sbjct: 415 FF 416


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1229

 Score =  171 bits (433), Expect(3) = 2e-77
 Identities = 126/501 (25%), Positives = 225/501 (44%), Gaps = 14/501 (2%)
 Frame = +2

Query: 788  SILFNGGLIGFFAMERGLKQGDPIFPLLFAIAKDALSRGMHYLSQNNHLRPITSIR-GFA 964
            S L NG   G     RGL+QGDP+ P LF +  + LS      ++   LR +  +R    
Sbjct: 511  SFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSG---LCTRAQRLRQLPGVRVSIN 567

Query: 965  AP--THLLFADDIIIFSNGNIRYLRNIITLLESYEKASGQAMNKAKCKKFMGGFSQRR-K 1135
             P   HLLFADD + FS  +      +  +L  Y KASGQ++N  K        + R  K
Sbjct: 568  GPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVK 627

Query: 1136 DRVVYELGIKEGTLPEKYLGVPLNQKKVMRALVALVLDRVKRKLTSWTGSMMSFKGKIIF 1315
             +V   L I++     KYLG+P +  +  R +   ++D++++K  SW    +S  GK + 
Sbjct: 628  GQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVM 687

Query: 1316 INLVLNSIPVYNVSIYKWSSSIIKEAEKTIRNFLWTGDPSQSRATTVSWDRVCKPLREGS 1495
            +  VL S+P+Y++S +K  S++ ++ +  +  F W   P   + + V+W ++  P   G 
Sbjct: 688  LKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGG 747

Query: 1496 LGIRRLKDINSSMIMKMAWRILTEEDDFPTFLKLKYFNRDGDIIQY---YKASSIWPGIR 1666
            LG R ++  N S++ K+ WR+L   +   + + L  +      ++     + S  W  I 
Sbjct: 748  LGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQPSHGWRSII 807

Query: 1667 AALQEVKDRSLWVIGNGNKADLIRGNWLGTTSLQAALNLSTSQLRGFNAKVSSILVNNS- 1843
            A  + +K+   W+I NG K  +    WL  +     +  +  + +  + +VS+++  N+ 
Sbjct: 808  AGREILKEGLGWLITNGEKVSIWNDPWLSISKPLVPIGPALREHQ--DLRVSALINQNTL 865

Query: 1844 -WTIPTILQDMFDASGLDISKVHRTDPEQDDYLIWSPNLKGVFSCKSAHN-----SIRRP 2005
             W    I   + +   L I ++        D L W P   G ++ +S +      SI  P
Sbjct: 866  QWDWNKIAVILPNYENL-IKQLPAPSSRGVDKLAWLPVKSGQYTSRSGYGIASVASIPIP 924

Query: 2006 ANLIAWAKYIWNPYVHHKLAANTWKLLKKCAATDVMVQKKGIHMVSSCRFCKSNIESLQH 2185
                 W   +W      K+    WK   +     + + ++ I   ++C  C +  ES  H
Sbjct: 925  QTQFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPSAACHRCGAP-ESTTH 983

Query: 2186 ILWECPFSKGLCRVWTSSRFQ 2248
            + + C F+    +VW  +  Q
Sbjct: 984  LFFHCEFA---AQVWELAPLQ 1001



 Score = 94.4 bits (233), Expect(3) = 2e-77
 Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
 Frame = +1

Query: 385 PGGLNANFITLIPKEKGAKKLTHFRPICMGNFLMKAITKIMQLRLNVIAPKIISKEQVGF 564
           P  +N   I LIPK+ G +K+  +RPI + N   K + KIM  R+ +I PK+IS+ Q  F
Sbjct: 376 PRRMNETHIRLIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAF 435

Query: 565 VPSRCSQATIGLASELFNELQ---IKRHGGNVAIKIDISQAYDTMS*EFLFGVLSKLGFS 735
           VP R     + +  E+ + L+    K+H  ++A+K D+S+AYD +  +FL  VL + GF 
Sbjct: 436 VPGRVISDNVLITHEVLHFLRTSSAKKH-CSMAVKTDMSKAYDRVEWDFLKKVLQRFGFH 494

Query: 736 NIWMNWLKAIMESAHKDLYSF 798
           +IW++W   ++E      YSF
Sbjct: 495 SIWIDW---VLECVTSVSYSF 512



 Score = 74.3 bits (181), Expect(3) = 2e-77
 Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   YFHNIYKIRQGASFITELHNDEGNILNDQDQIKSHILQFYEEKFKQVPTQQDFHLLS-LI 179
           YFH + + R+  + +T + +  G   +++ QI   I  ++++ F    +  DF ++   I
Sbjct: 249 YFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISGYFQQIFTS-ESDGDFSVVDEAI 307

Query: 180 PNLISAKENYSLCKIPDYLEIQQAIFSMKANSSPGPDGFQGHFFHSCWDIIKQDTCAAIQ 359
             ++S  +N  L +IP+  E++ A+FS+ A+ +PGPDGF   F+HS W II  D    I+
Sbjct: 308 EPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIR 367

Query: 360 FFFT 371
            FFT
Sbjct: 368 LFFT 371


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score =  199 bits (505), Expect(3) = 5e-77
 Identities = 129/501 (25%), Positives = 225/501 (44%), Gaps = 22/501 (4%)
 Frame = +2

Query: 782  RISILFNGGLIGFFAMERGLKQGDPIFPLLFAIAKDALSRGMHYLSQNNHLRPITSIRGF 961
            R S+  NG ++  F   RGL++GDP+ P LF    D LS  +        ++P+   R  
Sbjct: 866  RYSVRLNGNMLEPFYPTRGLREGDPLNPYLFLFIADGLSNILQRRRDERQIQPLKVCRSA 925

Query: 962  AAPTHLLFADDIIIFSNGNIRYLRNIITLLESYEKASGQAMNKAKCKKFMGGFS-QRRKD 1138
               +HLLFADD ++F    +     I   L+ YE+ +GQ +N  +C         Q R+D
Sbjct: 926  PGVSHLLFADDSLLFFKAEVIQATRIKEALDLYERCTGQLINPKECSLLFSALCPQERQD 985

Query: 1139 RVVYELGIKEGTLPEKYLGVPLNQKKVMRALVALVLDRVKRKLTSWTGSMMSFKGKIIFI 1318
             +   L ++     +K LG+P    ++       + +R +++LT W+   +S  GK   I
Sbjct: 986  GIKAVLQVERTCFDDKCLGLPTPDGRMKAEQFQPIKERFEKRLTDWSERFLSLAGKEALI 1045

Query: 1319 NLVLNSIPVYNVSIYKWSSSIIKEAEKTIRNFLWTGDPSQSRATTVSWDRVCKPLREGSL 1498
              V  ++P Y + ++K      +E E+ +RNF W  +  + +   ++W+++  P   G L
Sbjct: 1046 KSVAQALPTYTMGVFKMPERFCEEYEQLVRNFWWGHEKGEKKVHWIAWEKLTSPKLLGGL 1105

Query: 1499 GIRRLKDINSSMIMKMAWRILTEEDDF-PTFLKLKYFNRD--GDIIQYYKASSIWPGIRA 1669
            G R ++  N +++ + AWR++   D      LK KY+      D      +S  W GI  
Sbjct: 1106 GFRDIRCFNQALLARQAWRLIESPDSLCARVLKAKYYPNGTITDTAFPSVSSPTWKGIVH 1165

Query: 1670 ALQEVKDRSLWVIGNGNKADLIRGNWLGTTSLQAALNLSTSQLRGFN--AKVSSILVNN- 1840
             L+ +K   +W IG+G+K  + R +W+         NL   + + +N    V  ++V + 
Sbjct: 1166 GLELLKKGLIWRIGDGSKTKIWRNHWVAHGE-----NLKILEKKTWNRLIYVRELIVTDT 1220

Query: 1841 -SWTIPTILQDMFDASGLDISKVHRTDPEQDDYLIWSPNLKGVFSCKS----AHNSIRRP 2005
             +W  P I   + +    +I K+     E++D+  W     G+FS +S    A N  R+ 
Sbjct: 1221 KTWNEPLIRHIIREEDADEILKIRIPQREEEDFPAWHYEKTGIFSVRSVYRLAWNLARKT 1280

Query: 2006 ANLIAWAK----------YIWNPYVHHKLAANTWKLLKKCAATDVMVQKKGIHMVSSCRF 2155
            +   + +            +W   V  K+    WKL +   AT    +K+ I M  +C  
Sbjct: 1281 SEQASSSSGGADGRKIWDNVWKANVQPKVRVFAWKLAQDRLATWENKKKRKIEMFGTCPI 1340

Query: 2156 CKSNIESLQHILWECPFSKGL 2218
            C    E+  H   EC  +K L
Sbjct: 1341 CGQKEETGFHATVECTLAKAL 1361



 Score = 83.6 bits (205), Expect(3) = 5e-77
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
 Frame = +1

Query: 391  GLNANFITLIPKEKGAKKLTHFRPICMGNFLMKAITKIMQLRLNVIAPKIISKEQVGFVP 570
            G+N   I +IPK     ++  FRP+ + N + K + K +  RL  +  +IIS+ Q  FVP
Sbjct: 735  GMNDTVIVMIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQSAFVP 794

Query: 571  SRCSQATIGLASELFNELQ--IKRHGGNVAIKIDISQAYDTMS*EFLFGVLSKLGFSNIW 744
             R       +A E F+ +    +      A+K+D+S+AYD +   FL G L KLGF NIW
Sbjct: 795  GRMITDNALVAFECFHSIHKCTRESQDFCALKLDLSKAYDRVDWGFLDGALQKLGFGNIW 854

Query: 745  MNWLKAIMES 774
              W+ + + S
Sbjct: 855  RKWIMSCVTS 864



 Score = 55.8 bits (133), Expect(3) = 5e-77
 Identities = 31/122 (25%), Positives = 57/122 (46%)
 Frame = +3

Query: 3   YFHNIYKIRQGASFITELHNDEGNILNDQDQIKSHILQFYEEKFKQVPTQQDFHLLSLIP 182
           YFH     R   + I +L   +G + + ++++      F+ + + +  +     LL++  
Sbjct: 606 YFHLKASWRARKNLIKKLRRSDGMMCSKEEELGEIARSFFRDLYTKDESLNPGELLNMFE 665

Query: 183 NLISAKENYSLCKIPDYLEIQQAIFSMKANSSPGPDGFQGHFFHSCWDIIKQDTCAAIQF 362
             I+ + N  L K     EI  A+F +    +PGPDGF   FF   W ++K+D    ++ 
Sbjct: 666 PKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRNWGVLKRDVIEGVRE 725

Query: 363 FF 368
           FF
Sbjct: 726 FF 727


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1100

 Score =  171 bits (432), Expect(3) = 2e-76
 Identities = 96/328 (29%), Positives = 163/328 (49%), Gaps = 5/328 (1%)
 Frame = +2

Query: 782  RISILFNGGLIGFFAMERGLKQGDPIFPLLFAIAKDALSRGMHYLSQNNHLRPITSIRGF 961
            R ++ FNG ++  F   RGL+QGDP+ P LF    D LS  +    +   L P+   R  
Sbjct: 731  RYAVRFNGSMLKSFQPSRGLRQGDPLSPYLFLFVADGLSTILSSAVRTGDLVPLKVCRQA 790

Query: 962  AAPTHLLFADDIIIFSNGNIRYLRNIITLLESYEKASGQAMNKAKCKKFMGGF-SQRRKD 1138
               +HLLFADD ++F   N+     +   L  YE+ + Q ++ AKC    G   S + + 
Sbjct: 791  PGISHLLFADDSLLFFKANVEQATVVKEALNLYERCTSQLLSPAKCSMLFGKHCSDQTQP 850

Query: 1139 RVVYELGIKEGTLPEKYLGVPLNQKKVMRALVALVLDRVKRKLTSWTGSMMSFKGKIIFI 1318
             +   L +++ +  +KYLG+P  + ++       + +R  ++L  W    +   GK + I
Sbjct: 851  GIKSLLDVQQNSFEDKYLGLPTPEGRMKADRFQSIKERFFKRLIDWAEKHLPMGGKEVLI 910

Query: 1319 NLVLNSIPVYNVSIYKWSSSIIKEAEKTIRNFLWTGDPSQSRATTVSWDRVCKPLREGSL 1498
              V+ ++P Y +S++K   S  +E  + +R F W  D SQ +    SW ++ KP   G +
Sbjct: 911  KSVIQALPTYMMSVFKLPPSFCEEYMQLVRKFWWGEDRSQRKVHWASWQQLIKPKSMGGM 970

Query: 1499 GIRRLKDINSSMIMKMAWRILTEEDDF-PTFLKLKYFNRDGDIIQ---YYKASSIWPGIR 1666
            G + +K  N +++ + AWR++   D      LK KY+  +GD++       +S  W GI 
Sbjct: 971  GFKDMKIFNQALLARQAWRLVQFPDSLCARVLKAKYY-PNGDLLDTAFSSVSSDSWKGIV 1029

Query: 1667 AALQEVKDRSLWVIGNGNKADLIRGNWL 1750
              L+ +K   +W IG G K  + R +WL
Sbjct: 1030 HGLELLKKGVIWRIGTGRKVHIWRDDWL 1057



 Score = 95.5 bits (236), Expect(3) = 2e-76
 Identities = 52/133 (39%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
 Frame = +1

Query: 382 VPGGLNANFITLIPKEKGAKKLTHFRPICMGNFLMKAITKIMQLRLNVIAPKIISKEQVG 561
           +P G+N   I LIPK+K +K+L  FRPI + N + K + K +   L  I   IIS+EQ  
Sbjct: 597 MPEGVNTTAIVLIPKKKESKELKDFRPISLCNVIYKVVAKCLVNHLRPILESIISQEQSA 656

Query: 562 FVPSRCSQATIGLASELFNEL-QIKRHGGN-VAIKIDISQAYDTMS*EFLFGVLSKLGFS 735
           F+P R       +A E F+ + Q KR      A K+D+++AYD +  ++L GVL ++GFS
Sbjct: 657 FIPGRMITDNALIAFECFHNIAQSKRESQEFCAYKLDLAKAYDRVDWQYLEGVLDRMGFS 716

Query: 736 NIWMNWLKAIMES 774
           N W+ W+ A + S
Sbjct: 717 NTWIQWMMACVTS 729



 Score = 70.1 bits (170), Expect(3) = 2e-76
 Identities = 36/123 (29%), Positives = 63/123 (51%)
 Frame = +3

Query: 6   FHNIYKIRQGASFITELHNDEGNILNDQDQIKSHILQFYEEKFKQVPTQQDFHLLSLIPN 185
           FH     R   + I++L   +G+  + + ++++    F+++ + + P      LL LI  
Sbjct: 472 FHRKAAWRHRKNKISKLFLPDGSWTDQRKEMETMATNFFKDLYTKDPLVTPQPLLDLIML 531

Query: 186 LISAKENYSLCKIPDYLEIQQAIFSMKANSSPGPDGFQGHFFHSCWDIIKQDTCAAIQFF 365
            ++ + N  LCK     EI  A+F +    +PGPDGF   FF   W+++K D C A++ F
Sbjct: 532 KVTEQMNEDLCKAFSDKEISDALFQIGPIKAPGPDGFPARFFQRNWEVLKNDVCKAVKLF 591

Query: 366 FTQ 374
           F Q
Sbjct: 592 FDQ 594