BLASTX nr result

ID: Coptis24_contig00024125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024125
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272995.1| PREDICTED: leucoanthocyanidin dioxygenase [V...   208   5e-52
ref|XP_002323582.1| predicted protein [Populus trichocarpa] gi|2...   206   3e-51
gb|AFK44122.1| unknown [Lotus japonicus]                              202   5e-50
ref|XP_003516383.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   200   1e-49
ref|XP_003616646.1| 1-aminocyclopropane-1-carboxylate oxidase [M...   200   1e-49

>ref|XP_002272995.1| PREDICTED: leucoanthocyanidin dioxygenase [Vitis vinifera]
           gi|147769193|emb|CAN59837.1| hypothetical protein
           VITISV_039830 [Vitis vinifera]
           gi|297736599|emb|CBI25470.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  208 bits (530), Expect = 5e-52
 Identities = 98/127 (77%), Positives = 112/127 (88%)
 Frame = -2

Query: 601 SDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKSIEHRAI 422
           SDPGGMT LLPDH V GLQVRK  KW+TV+PAP AFIVNIGDQIQVLSNAIYKS+EHR +
Sbjct: 233 SDPGGMTFLLPDHDVPGLQVRKDHKWITVKPAPHAFIVNIGDQIQVLSNAIYKSVEHRVM 292

Query: 421 VNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGPQGKSQM 242
           VN +KER+S+AFFYNPKSD+L+EP + LVTPD PA Y  MTFD+YR+YIR RGP+GKSQ+
Sbjct: 293 VNSLKERVSLAFFYNPKSDILIEPVKALVTPDTPALYPGMTFDQYRLYIRMRGPRGKSQV 352

Query: 241 ESLKSPR 221
           ESLKSPR
Sbjct: 353 ESLKSPR 359


>ref|XP_002323582.1| predicted protein [Populus trichocarpa] gi|222868212|gb|EEF05343.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  206 bits (523), Expect = 3e-51
 Identities = 96/126 (76%), Positives = 115/126 (91%)
 Frame = -2

Query: 601 SDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKSIEHRAI 422
           SDPGGMT+LLPD +V+GLQVR+ D WVTV+PAP+AFI+NIGDQIQVLSNAIY+S+EHR I
Sbjct: 236 SDPGGMTILLPDENVAGLQVRRKDSWVTVKPAPNAFIINIGDQIQVLSNAIYQSVEHRVI 295

Query: 421 VNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGPQGKSQM 242
           VN  K+R+S+AFFYNPKSDLL+EP++ELVT D+PA Y PMTFDEYR+YIRT+GP GK Q+
Sbjct: 296 VNSNKDRVSLAFFYNPKSDLLIEPSKELVTVDRPALYPPMTFDEYRLYIRTKGPCGKKQV 355

Query: 241 ESLKSP 224
           ESLKSP
Sbjct: 356 ESLKSP 361


>gb|AFK44122.1| unknown [Lotus japonicus]
          Length = 367

 Score =  202 bits (513), Expect = 5e-50
 Identities = 96/127 (75%), Positives = 110/127 (86%)
 Frame = -2

Query: 601 SDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKSIEHRAI 422
           SDPGGMT+LLPD  V GLQVRKGD W+TV PA  AFIVNIGDQIQVLSNAIY S+EHR I
Sbjct: 241 SDPGGMTMLLPDDQVRGLQVRKGDDWITVNPARHAFIVNIGDQIQVLSNAIYTSVEHRVI 300

Query: 421 VNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGPQGKSQM 242
           VN  KER+S+AFFYNPKSD+ +EP +ELVTPD+PA Y  MTFDEYR++IR RGP+GKSQ+
Sbjct: 301 VNSDKERVSLAFFYNPKSDIPIEPVKELVTPDKPALYPAMTFDEYRLFIRMRGPRGKSQV 360

Query: 241 ESLKSPR 221
           ES+KSPR
Sbjct: 361 ESMKSPR 367


>ref|XP_003516383.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1-like
           [Glycine max]
          Length = 417

 Score =  200 bits (509), Expect = 1e-49
 Identities = 92/125 (73%), Positives = 113/125 (90%)
 Frame = -2

Query: 601 SDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKSIEHRAI 422
           SDPGGMT+LLPD +VSGLQVR+G+ W+TV+P P+AFI+N+GDQIQVLSNAIYKSIEHR I
Sbjct: 292 SDPGGMTILLPDENVSGLQVRRGEDWITVKPVPNAFIINMGDQIQVLSNAIYKSIEHRVI 351

Query: 421 VNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGPQGKSQM 242
           VN  K+R+S+AFFYNP+SD+ ++PA+ELVT D+PA Y PMTFDEYR+YIRTRGP GK+Q+
Sbjct: 352 VNSNKDRVSLAFFYNPRSDIPIQPAKELVTKDRPALYPPMTFDEYRLYIRTRGPSGKAQV 411

Query: 241 ESLKS 227
           ESL S
Sbjct: 412 ESLTS 416


>ref|XP_003616646.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula]
           gi|355517981|gb|AES99604.1|
           1-aminocyclopropane-1-carboxylate oxidase [Medicago
           truncatula]
          Length = 358

 Score =  200 bits (509), Expect = 1e-49
 Identities = 95/127 (74%), Positives = 110/127 (86%)
 Frame = -2

Query: 601 SDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKSIEHRAI 422
           SDPGGMTLLLPD  + GLQVRKGD W+TV+P  +AFIVNIGDQIQVLSNAIY+S+EHR I
Sbjct: 232 SDPGGMTLLLPDDQIHGLQVRKGDNWITVKPVRNAFIVNIGDQIQVLSNAIYRSVEHRVI 291

Query: 421 VNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGPQGKSQM 242
            N  KER+S+AFFYNPKSD+ +EPA+ELV PD+PA Y  MTFDEYR++IR RGP GKSQ+
Sbjct: 292 ANSHKERVSLAFFYNPKSDIPIEPAKELVKPDKPALYPAMTFDEYRLFIRMRGPCGKSQV 351

Query: 241 ESLKSPR 221
           ESLKSPR
Sbjct: 352 ESLKSPR 358


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