BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024112
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    50   3e-07
emb|CAN81848.1| hypothetical protein VITISV_036819 [Vitis vinifera]    50   3e-07
ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    52   2e-06
emb|CBI41066.3| unnamed protein product [Vitis vinifera]               52   2e-06
ref|XP_002315654.1| predicted protein [Populus trichocarpa] gi|2...    52   5e-06

>ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
           gi|296081383|emb|CBI16816.3| unnamed protein product
           [Vitis vinifera]
          Length = 442

 Score = 50.1 bits (118), Expect(3) = 3e-07
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = -3

Query: 264 LSALDEDNLIPCYGFGDESTHDKKVFT 184
           LSA DEDNLIPC+GFGD STHD+ +F+
Sbjct: 143 LSAFDEDNLIPCFGFGDASTHDQDIFS 169



 Score = 26.6 bits (57), Expect(3) = 3e-07
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -1

Query: 185 LFSYYRNYKPHNDYDETLMR 126
           +FS+Y++ +P N ++E LMR
Sbjct: 167 IFSFYQDERPCNGFEEVLMR 186



 Score = 21.9 bits (45), Expect(3) = 3e-07
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 304 DPYEQAISILERAPFSF 254
           +PYEQAISI+ +   +F
Sbjct: 130 NPYEQAISIIGKTLSAF 146


>emb|CAN81848.1| hypothetical protein VITISV_036819 [Vitis vinifera]
          Length = 440

 Score = 50.1 bits (118), Expect(3) = 3e-07
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = -3

Query: 264 LSALDEDNLIPCYGFGDESTHDKKVFT 184
           LSA DEDNLIPC+GFGD STHD+ +F+
Sbjct: 148 LSAFDEDNLIPCFGFGDASTHDQDIFS 174



 Score = 26.6 bits (57), Expect(3) = 3e-07
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -1

Query: 185 LFSYYRNYKPHNDYDETLMR 126
           +FS+Y++ +P N ++E LMR
Sbjct: 172 IFSFYQDERPCNGFEEVLMR 191



 Score = 21.9 bits (45), Expect(3) = 3e-07
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 304 DPYEQAISILERAPFSF 254
           +PYEQAISI+ +   +F
Sbjct: 135 NPYEQAISIIGKTLSAF 151


>ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 420

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -3

Query: 264 LSALDEDNLIPCYGFGDESTHDKKVFT 184
           LSA DEDNLIPCYGFGD +THD++VF+
Sbjct: 122 LSAFDEDNLIPCYGFGDATTHDQEVFS 148



 Score = 25.0 bits (53), Expect(2) = 2e-06
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 322 HTRTCLDPYEQAISILERAPFSF 254
           H    L+PY+QAISI+ R   +F
Sbjct: 103 HVGDSLNPYQQAISIIGRTLSAF 125


>emb|CBI41066.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -3

Query: 264 LSALDEDNLIPCYGFGDESTHDKKVFT 184
           LSA DEDNLIPCYGFGD +THD++VF+
Sbjct: 122 LSAFDEDNLIPCYGFGDATTHDQEVFS 148



 Score = 25.0 bits (53), Expect(2) = 2e-06
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 322 HTRTCLDPYEQAISILERAPFSF 254
           H    L+PY+QAISI+ R   +F
Sbjct: 103 HVGDSLNPYQQAISIIGRTLSAF 125


>ref|XP_002315654.1| predicted protein [Populus trichocarpa] gi|222864694|gb|EEF01825.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score = 52.0 bits (123), Expect(2) = 5e-06
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = -3

Query: 264 LSALDEDNLIPCYGFGDESTHDKKVFT 184
           LSA DEDNLIPCYGFGD STHD+ VF+
Sbjct: 99  LSAFDEDNLIPCYGFGDASTHDQDVFS 125



 Score = 23.1 bits (48), Expect(2) = 5e-06
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 304 DPYEQAISILERAPFSF 254
           +PYEQAISI+ R   +F
Sbjct: 86  NPYEQAISIIGRTLSAF 102