BLASTX nr result

ID: Coptis24_contig00024103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024103
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319539.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_002284576.1| PREDICTED: mannosylglycoprotein endo-beta-ma...   186   2e-45
emb|CAN82620.1| hypothetical protein VITISV_002311 [Vitis vinifera]   186   2e-45
ref|XP_002512381.1| beta-mannosidase, putative [Ricinus communis...   185   5e-45
ref|XP_003555601.1| PREDICTED: mannosylglycoprotein endo-beta-ma...   176   2e-42

>ref|XP_002319539.1| predicted protein [Populus trichocarpa] gi|222857915|gb|EEE95462.1|
            predicted protein [Populus trichocarpa]
          Length = 973

 Score =  189 bits (480), Expect = 3e-46
 Identities = 88/158 (55%), Positives = 117/158 (74%)
 Frame = +2

Query: 2    FIEGSKYEIQMKVQNKNENPNSTKLNLKNHIRSVQGNNDDNINALEPSQGISEEHCEVGL 181
            FI+GS YE++M V+NK++ P+S  L  KN+  +  G+ D ++ ++EP    +EE  E  L
Sbjct: 816  FIKGSTYEMEMHVENKSKKPDSKSLTYKNNFVTRIGDGDFDMASVEPVNSAAEEKQEASL 875

Query: 182  LRRMYRCFSRENNGLRTVETNGTDLGIAFFLHFSVHATKKDKQEGEDTRILPVHYSDNYF 361
             +R+YR FS E + L+  E NG+D G+AFFL+FSVHA++   +EGEDTRILPVHYSDNYF
Sbjct: 876  FQRIYRRFSGETDDLQVSEINGSDEGVAFFLYFSVHASEPGHKEGEDTRILPVHYSDNYF 935

Query: 362  SLVPGETLPISISFEAPSGVTPRVTLHGWNYRAGHTIY 475
            SLVPGE +PI ISFE P GVTPR+ LHGWNY +GH +Y
Sbjct: 936  SLVPGEVMPIKISFEVPPGVTPRIRLHGWNYHSGHKVY 973


>ref|XP_002284576.1| PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Vitis
            vinifera]
          Length = 973

 Score =  186 bits (473), Expect = 2e-45
 Identities = 91/158 (57%), Positives = 115/158 (72%)
 Frame = +2

Query: 2    FIEGSKYEIQMKVQNKNENPNSTKLNLKNHIRSVQGNNDDNINALEPSQGISEEHCEVGL 181
            FI GS YEIQM VQN ++ P+S  L  KN+     G+ D +  A EP     EE   VG+
Sbjct: 816  FITGSTYEIQMHVQNTSKKPDSLSLIYKNNFIVRNGDGDYDTTAAEPVHSRMEEKHGVGV 875

Query: 182  LRRMYRCFSRENNGLRTVETNGTDLGIAFFLHFSVHATKKDKQEGEDTRILPVHYSDNYF 361
            L+R+   FS+E  GL+ V+ NG D+G+AFFLHFSVH +KK+ + GEDTRILPVHYSDNYF
Sbjct: 876  LQRICSRFSKEAAGLKVVQMNGADVGVAFFLHFSVHVSKKEHKAGEDTRILPVHYSDNYF 935

Query: 362  SLVPGETLPISISFEAPSGVTPRVTLHGWNYRAGHTIY 475
            SLVPGET+PI+I+FE P GVTPRVTL+GWN  + +T+Y
Sbjct: 936  SLVPGETMPITITFEVPPGVTPRVTLNGWNNHSDYTVY 973


>emb|CAN82620.1| hypothetical protein VITISV_002311 [Vitis vinifera]
          Length = 973

 Score =  186 bits (473), Expect = 2e-45
 Identities = 91/158 (57%), Positives = 115/158 (72%)
 Frame = +2

Query: 2    FIEGSKYEIQMKVQNKNENPNSTKLNLKNHIRSVQGNNDDNINALEPSQGISEEHCEVGL 181
            FI GS YEIQM VQN ++ P+S  L  KN+     G+ D +  A EP     EE   VG+
Sbjct: 816  FITGSTYEIQMHVQNTSKKPDSLSLIYKNNFIVRNGDGDYDTTAAEPVHSRMEEKHGVGV 875

Query: 182  LRRMYRCFSRENNGLRTVETNGTDLGIAFFLHFSVHATKKDKQEGEDTRILPVHYSDNYF 361
            L+R+   FS+E  GL+ V+ NG D+G+AFFLHFSVH +KK+ + GEDTRILPVHYSDNYF
Sbjct: 876  LQRICSRFSKEAAGLKVVQMNGADVGVAFFLHFSVHVSKKEHKAGEDTRILPVHYSDNYF 935

Query: 362  SLVPGETLPISISFEAPSGVTPRVTLHGWNYRAGHTIY 475
            SLVPGET+PI+I+FE P GVTPRVTL+GWN  + +T+Y
Sbjct: 936  SLVPGETMPITITFEVPPGVTPRVTLNGWNNHSDYTVY 973


>ref|XP_002512381.1| beta-mannosidase, putative [Ricinus communis]
            gi|223548342|gb|EEF49833.1| beta-mannosidase, putative
            [Ricinus communis]
          Length = 973

 Score =  185 bits (469), Expect = 5e-45
 Identities = 87/157 (55%), Positives = 115/157 (73%)
 Frame = +2

Query: 2    FIEGSKYEIQMKVQNKNENPNSTKLNLKNHIRSVQGNNDDNINALEPSQGISEEHCEVGL 181
            FI+GS YEI+M V+N ++ P+S     KN+  +  G +D ++ ++EP    ++E  E  L
Sbjct: 816  FIKGSTYEIEMHVKNTSKKPDSKCSTYKNNFITNLGTDDFDMTSVEPVNSGTKEKPEASL 875

Query: 182  LRRMYRCFSRENNGLRTVETNGTDLGIAFFLHFSVHATKKDKQEGEDTRILPVHYSDNYF 361
             +R++R FS+E +GLR  E NG + G+AFFLHFSVHA+K + +EGED+RILPVHYSDNYF
Sbjct: 876  FQRIFRHFSQETDGLRVTEINGVEEGVAFFLHFSVHASKANHKEGEDSRILPVHYSDNYF 935

Query: 362  SLVPGETLPISISFEAPSGVTPRVTLHGWNYRAGHTI 472
            SLVPGE +PI ISFE P GVTPRVTL GWNY  GH +
Sbjct: 936  SLVPGEVMPIKISFEIPPGVTPRVTLEGWNYHGGHNV 972


>ref|XP_003555601.1| PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Glycine
            max]
          Length = 974

 Score =  176 bits (447), Expect = 2e-42
 Identities = 89/159 (55%), Positives = 117/159 (73%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2    FIEGSKYEIQMKVQNKNENPNSTKLNLKNHIRSVQGNNDDNINALEP-SQGISEEHCEVG 178
            FIEGS Y ++M VQN ++ P+S  L L +   +   NN    ++ E    G  +EH EVG
Sbjct: 814  FIEGSTYILRMHVQNTSKKPDSKSLTLVHGSTARLSNNCFVTDSPETIDSGTGKEH-EVG 872

Query: 179  LLRRMYRCFSRENNGLRTVETNGTDLGIAFFLHFSVHATKKDKQEGEDTRILPVHYSDNY 358
              +R+++CF+ +++GL+  E NG D+G+AFFLHFSVHA+ KD +EGEDTRILPVHYSDNY
Sbjct: 873  WFKRIHKCFAGKSDGLKVSEINGQDIGVAFFLHFSVHASNKDHKEGEDTRILPVHYSDNY 932

Query: 359  FSLVPGETLPISISFEAPSGVTPRVTLHGWNYRAGHTIY 475
            FS+VPGET+ I ISFE P GV+PRVTLHGWNY+ G TI+
Sbjct: 933  FSVVPGETMTIKISFEVPPGVSPRVTLHGWNYQ-GQTIH 970


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