BLASTX nr result

ID: Coptis24_contig00024101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024101
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321800.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002530144.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|XP_002332302.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002323904.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
emb|CBI21214.3| unnamed protein product [Vitis vinifera]               78   9e-13

>ref|XP_002321800.1| predicted protein [Populus trichocarpa] gi|222868796|gb|EEF05927.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/87 (51%), Positives = 62/87 (71%)
 Frame = +1

Query: 7   PPTMKEASSSSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKTAF 186
           PP + E    +P ++   I K +VSQICQSVGFK TQ SAL  L++I T YL+TL+KTA 
Sbjct: 27  PPPLAE----NPSDYAFKITKTAVSQICQSVGFKSTQLSALETLTHIATLYLQTLAKTAV 82

Query: 187 LSANSSGRTESNVFDIVYAIEEMSFVQ 267
             +N+S RT+SN+FDI+ ++ +MS VQ
Sbjct: 83  SYSNASNRTQSNIFDIINSLHDMSSVQ 109


>ref|XP_002530144.1| conserved hypothetical protein [Ricinus communis]
           gi|223530343|gb|EEF32236.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 257

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/79 (53%), Positives = 58/79 (73%)
 Frame = +1

Query: 31  SSSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKTAFLSANSSGR 210
           ++ P +F   I KISVSQICQSVGFK TQ SAL  L++I T YLK L+K +   +++S R
Sbjct: 17  ATDPSDFPFQITKISVSQICQSVGFKSTQLSALETLTHIATLYLKNLAKASASYSSASNR 76

Query: 211 TESNVFDIVYAIEEMSFVQ 267
           T+SNVFDI+ A+ ++S +Q
Sbjct: 77  TQSNVFDIINALHDLSSIQ 95


>ref|XP_002332302.1| predicted protein [Populus trichocarpa] gi|222832464|gb|EEE70941.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/89 (48%), Positives = 63/89 (70%)
 Frame = +1

Query: 1   KKPPTMKEASSSSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKT 180
           +KPP    A + +P ++   I K +VSQICQSVGFK TQ SAL  L+++ T  L+TL+KT
Sbjct: 15  QKPP----APAENPSDYVFKITKTAVSQICQSVGFKTTQLSALETLTHVATLCLQTLAKT 70

Query: 181 AFLSANSSGRTESNVFDIVYAIEEMSFVQ 267
           A L +N+S RT+SN+FDI+ ++ +M  V+
Sbjct: 71  AVLYSNASNRTQSNIFDIINSLHDMYSVR 99


>ref|XP_002323904.1| predicted protein [Populus trichocarpa] gi|222866906|gb|EEF04037.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/83 (46%), Positives = 54/83 (65%)
 Frame = +1

Query: 19  KEASSSSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKTAFLSAN 198
           K  S  S   F   IAKI+V+Q+C++VGF+  Q SAL  LS++ T Y++ L KTA   AN
Sbjct: 20  KRKSRVSGDEFTRAIAKIAVAQMCETVGFQSFQQSALEKLSDVTTWYIRNLGKTAQFYAN 79

Query: 199 SSGRTESNVFDIVYAIEEMSFVQ 267
            +GRTE NVFD++  +EE+   Q
Sbjct: 80  LAGRTEGNVFDVIQGMEELGLSQ 102


>emb|CBI21214.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/78 (47%), Positives = 55/78 (70%)
 Frame = +1

Query: 34  SSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKTAFLSANSSGRT 213
           SS ++F   IAKI+V+QIC+S GF+  Q SAL  LS ++  Y++ L KTA   ANS+ RT
Sbjct: 20  SSDRDFPQAIAKIAVAQICESAGFQGFQQSALETLSEVVVRYIRELGKTAHTYANSACRT 79

Query: 214 ESNVFDIVYAIEEMSFVQ 267
           E N+FDI+  +E+++ +Q
Sbjct: 80  ECNIFDIIQGLEDLASLQ 97


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