BLASTX nr result

ID: Coptis24_contig00024099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024099
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZNS1.1|RS7_AVIMR RecName: Full=40S ribosomal protein S7 gi|...   152   4e-40
emb|CBI33643.3| unnamed protein product [Vitis vinifera]              149   1e-39
ref|XP_002283918.1| PREDICTED: 40S ribosomal protein S7 [Vitis v...   149   1e-39
ref|NP_001237923.1| uncharacterized protein LOC100500684 [Glycin...   152   8e-39
gb|AAN04468.1| ribosomal protein S7 [Oryza sativa Japonica Group...   149   1e-38

>sp|Q9ZNS1.1|RS7_AVIMR RecName: Full=40S ribosomal protein S7 gi|3851636|gb|AAC97947.1|
           unknown [Avicennia marina] gi|4128206|gb|AAD03501.1| 40S
           ribosome protein S7 [Avicennia marina]
          Length = 190

 Score =  152 bits (383), Expect(2) = 4e-40
 Identities = 70/92 (76%), Positives = 85/92 (92%)
 Frame = +3

Query: 57  IKELEKKFSGKDVIMVATRRVLSPPKKGSAIVRPRSRTLTAVHDAMLEYVVYPAEIIGKR 236
           ++ELEKKFSGK+V+++ATRR+L PPKKGSA+ RPRSRTLTAVHDAMLE +VYPAEI+GKR
Sbjct: 81  VRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLTAVHDAMLEDIVYPAEIVGKR 140

Query: 237 IKYHSDGSKIMKVYLDSKERNNTENKLETFAG 332
           ++Y  DGSKIMKV+LD K +N+TENKLETFAG
Sbjct: 141 VRYRLDGSKIMKVFLDPKAKNDTENKLETFAG 172



 Score = 37.7 bits (86), Expect(2) = 4e-40
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 4   QVDVSGSRKTVVVHVPYRLR 63
           Q+DVSG +K VV+HVPYRLR
Sbjct: 51  QIDVSGGKKAVVIHVPYRLR 70


>emb|CBI33643.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  149 bits (375), Expect(2) = 1e-39
 Identities = 68/92 (73%), Positives = 85/92 (92%)
 Frame = +3

Query: 57  IKELEKKFSGKDVIMVATRRVLSPPKKGSAIVRPRSRTLTAVHDAMLEYVVYPAEIIGKR 236
           ++ELEKKFSGK+V+++ATRR++ PPKKGSA+ RPRSRTLT+VH+AMLE +VYPAEI+GKR
Sbjct: 145 VRELEKKFSGKEVVLIATRRIVRPPKKGSAVQRPRSRTLTSVHEAMLEDIVYPAEIVGKR 204

Query: 237 IKYHSDGSKIMKVYLDSKERNNTENKLETFAG 332
           I+Y  DGSKI+K++LD KERNNTE KLETFAG
Sbjct: 205 IRYRLDGSKIIKIFLDPKERNNTEYKLETFAG 236



 Score = 39.3 bits (90), Expect(2) = 1e-39
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +1

Query: 4   QVDVSGSRKTVVVHVPYRLRNWKR 75
           Q+D+SG+RK +VVHVPYRLR   R
Sbjct: 115 QIDISGNRKAIVVHVPYRLRKGYR 138


>ref|XP_002283918.1| PREDICTED: 40S ribosomal protein S7 [Vitis vinifera]
           gi|147841343|emb|CAN60178.1| hypothetical protein
           VITISV_011364 [Vitis vinifera]
          Length = 191

 Score =  149 bits (375), Expect(2) = 1e-39
 Identities = 68/92 (73%), Positives = 85/92 (92%)
 Frame = +3

Query: 57  IKELEKKFSGKDVIMVATRRVLSPPKKGSAIVRPRSRTLTAVHDAMLEYVVYPAEIIGKR 236
           ++ELEKKFSGK+V+++ATRR++ PPKKGSA+ RPRSRTLT+VH+AMLE +VYPAEI+GKR
Sbjct: 81  VRELEKKFSGKEVVLIATRRIVRPPKKGSAVQRPRSRTLTSVHEAMLEDIVYPAEIVGKR 140

Query: 237 IKYHSDGSKIMKVYLDSKERNNTENKLETFAG 332
           I+Y  DGSKI+K++LD KERNNTE KLETFAG
Sbjct: 141 IRYRLDGSKIIKIFLDPKERNNTEYKLETFAG 172



 Score = 39.3 bits (90), Expect(2) = 1e-39
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +1

Query: 4   QVDVSGSRKTVVVHVPYRLRNWKR 75
           Q+D+SG+RK +VVHVPYRLR   R
Sbjct: 51  QIDISGNRKAIVVHVPYRLRKGYR 74


>ref|NP_001237923.1| uncharacterized protein LOC100500684 [Glycine max]
           gi|255630929|gb|ACU15827.1| unknown [Glycine max]
          Length = 191

 Score =  152 bits (383), Expect(2) = 8e-39
 Identities = 71/92 (77%), Positives = 84/92 (91%)
 Frame = +3

Query: 57  IKELEKKFSGKDVIMVATRRVLSPPKKGSAIVRPRSRTLTAVHDAMLEYVVYPAEIIGKR 236
           ++ELEKKFSGKDV+ +ATRR++ PPKKGSA+ RPR+RTLTAVHDAMLE VVYPAEI+GKR
Sbjct: 81  VRELEKKFSGKDVVFIATRRIVRPPKKGSAVQRPRTRTLTAVHDAMLEDVVYPAEIVGKR 140

Query: 237 IKYHSDGSKIMKVYLDSKERNNTENKLETFAG 332
           ++Y  DGSKIMKV+LD KERNNTE KLETF+G
Sbjct: 141 VRYRIDGSKIMKVFLDPKERNNTEYKLETFSG 172



 Score = 33.5 bits (75), Expect(2) = 8e-39
 Identities = 13/20 (65%), Positives = 19/20 (95%)
 Frame = +1

Query: 4   QVDVSGSRKTVVVHVPYRLR 63
           Q+DV+G+RK VV++VP+RLR
Sbjct: 51  QMDVAGNRKAVVIYVPFRLR 70


>gb|AAN04468.1| ribosomal protein S7 [Oryza sativa Japonica Group]
           gi|218196590|gb|EEC79017.1| hypothetical protein
           OsI_19547 [Oryza sativa Indica Group]
          Length = 192

 Score =  149 bits (377), Expect(2) = 1e-38
 Identities = 68/91 (74%), Positives = 84/91 (92%)
 Frame = +3

Query: 57  IKELEKKFSGKDVIMVATRRVLSPPKKGSAIVRPRSRTLTAVHDAMLEYVVYPAEIIGKR 236
           ++ELEKKFSGKDV++VATRR++ PPKKGSA+VRPR+RTLTAVHD +LE VVYPAEI+GKR
Sbjct: 81  VRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLTAVHDGILEDVVYPAEIVGKR 140

Query: 237 IKYHSDGSKIMKVYLDSKERNNTENKLETFA 329
           ++YH DG KIMK++LD KERNNTE KL+TF+
Sbjct: 141 VRYHLDGRKIMKIFLDPKERNNTEYKLDTFS 171



 Score = 35.0 bits (79), Expect(2) = 1e-38
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +1

Query: 4   QVDVSGSRKTVVVHVPYRLR 63
           Q+D+ G+RK V++HVPYRLR
Sbjct: 51  QMDLPGNRKAVIIHVPYRLR 70


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