BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024094
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat...   108   6e-22
ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...   105   4e-21
ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat...    98   8e-19
ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat...    98   8e-19

>ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Glycine max]
          Length = 465

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/79 (63%), Positives = 61/79 (77%)
 Frame = -2

Query: 240 EAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEAEFDEAEFILDEMLFKGHVPCVGSVNTFV 61
           EA DLF DMPR  CVPDVVTYRT+FDGLC   +F+EA  +L+EM+FKG+VPC  S+N FV
Sbjct: 350 EADDLFRDMPRRQCVPDVVTYRTVFDGLCQWMQFEEAGLVLEEMVFKGYVPCSSSLNEFV 409

Query: 60  DGLCREGRMKLLGSVLNSL 4
             LC+EG  +LLG VL+ L
Sbjct: 410 GRLCQEGDFELLGKVLSGL 428


>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/79 (63%), Positives = 60/79 (75%)
 Frame = -2

Query: 240 EAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEAEFDEAEFILDEMLFKGHVPCVGSVNTFV 61
           EA DLFEDMPR GC PDV +YR LFDGLC+  +F+EA FILDEM+FKG+ P   S   FV
Sbjct: 342 EANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFV 401

Query: 60  DGLCREGRMKLLGSVLNSL 4
           + LC+EG ++LL  VLNSL
Sbjct: 402 EALCQEGNLELLCKVLNSL 420



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/70 (42%), Positives = 43/70 (61%)
 Frame = -2

Query: 240 EAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEAEFDEAEFILDEMLFKGHVPCVGSVNTFV 61
           E   + E+M  NGC PD VTY  +  G C+E +F+ A  +L+EM+ KG  P V S N  +
Sbjct: 272 EVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVII 331

Query: 60  DGLCREGRMK 31
            GLC+EG+ +
Sbjct: 332 SGLCKEGKWR 341


>ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|222860516|gb|EEE98063.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/79 (60%), Positives = 55/79 (69%)
 Frame = -2

Query: 240 EAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEAEFDEAEFILDEMLFKGHVPCVGSVNTFV 61
           EA DLFEDMPR GC PDVV+YR LFDG C+  +F EA FILDEM+FKG VPC  S+  FV
Sbjct: 344 EANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFV 403

Query: 60  DGLCREGRMKLLGSVLNSL 4
           + LC      LL S  N+L
Sbjct: 404 NRLCEGKNEDLLRSAFNTL 422


>ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 394

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = -2

Query: 240 EAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEAEFDEAEFILDEMLFKGHVPCVGSVNTFV 61
           +A+DL EDMPR GC PDV++YR +FDGLC+  +  EA  ILDEM+FKG+VP   S+N  V
Sbjct: 281 KAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLV 340

Query: 60  DGLCREGRMKLLGSVLNSL 4
           D LC+E  M+LL  +LNSL
Sbjct: 341 DRLCQECNMELLWMILNSL 359



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = -2

Query: 240 EAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEAEFDEAEFILDEMLFKGHVPCVGSVNTFV 61
           E  D+  +M  NGC PD VTY  + +G C E + + A  ++DEM+ KG  P V S NT +
Sbjct: 211 EVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTII 270

Query: 60  DGLCREGRM 34
             LC+EG++
Sbjct: 271 GWLCKEGKL 279


>ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 527

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = -2

Query: 240 EAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEAEFDEAEFILDEMLFKGHVPCVGSVNTFV 61
           +A+DL EDMPR GC PDV++YR +FDGLC+  +  EA  ILDEM+FKG+VP   S+N  V
Sbjct: 414 KAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLV 473

Query: 60  DGLCREGRMKLLGSVLNSL 4
           D LC+E  M+LL  +LNSL
Sbjct: 474 DRLCQECNMELLWMILNSL 492



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = -2

Query: 240 EAIDLFEDMPRNGCVPDVVTYRTLFDGLCDEAEFDEAEFILDEMLFKGHVPCVGSVNTFV 61
           E  D+  +M  NGC PD VTY  + +G C E + + A  ++DEM+ KG  P V S NT +
Sbjct: 344 EVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTII 403

Query: 60  DGLCREGRM 34
             LC+EG++
Sbjct: 404 GWLCKEGKL 412