BLASTX nr result
ID: Coptis24_contig00024090
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00024090 (738 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi... 404 e-110 emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] 404 e-110 ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containi... 391 e-107 ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containi... 386 e-105 ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 379 e-103 >ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like [Vitis vinifera] Length = 719 Score = 404 bits (1037), Expect = e-110 Identities = 195/245 (79%), Positives = 216/245 (88%) Frame = +2 Query: 2 SFVCVISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQT 181 SFVCVISACSNLSSPSQGKQ+HSLALKSDIP NRISV NALIAMYSKCGNLQDARRLF Sbjct: 345 SFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDR 404 Query: 182 MPEHNTVSFNSIIAGYAQHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVDEG 361 M EHNTVS NS+IAGYAQHG +SL +FQ MLE ++ PTSITF+SVLS+CAHTG V+EG Sbjct: 405 MAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG 464 Query: 362 WKYFNMMKEKFGIEPDAEHYSCMIDLLGRAGKLDEAERLIETMPFDPCSISWGALLGACR 541 W YFNMMKEKF IEP+AEHYSCMIDLLGRAGKL EAE LI MPF+P SI W +LLGACR Sbjct: 465 WNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACR 524 Query: 542 THGNVELGAKAASHCLRLEPNNAAPYVMLANIYASAGRWEEYATVKRLMRDRGVKKKPGC 721 THGN+EL KAA+ L+LEP+NAAPYV+L+N+YASAGRWEE ATV++ MRDRGVKKKPGC Sbjct: 525 THGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGC 584 Query: 722 SWIEV 736 SWIEV Sbjct: 585 SWIEV 589 Score = 71.6 bits (174), Expect = 2e-10 Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 3/160 (1%) Frame = +2 Query: 59 QLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQTMPE-HNTVSFNSIIAGYAQ 235 QLHS+A+ S + +SV+NAL+ Y K G+L DA+R+F M + VS+NS+I Y Q Sbjct: 159 QLHSVAVSSGFD-SYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQ 217 Query: 236 HGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVD-EGWKYFNMMKEKFGIEPDA 412 H G+K+L +FQ+M+ + T SVL+ A T + D G F+ K G ++ Sbjct: 218 HQEGSKALGLFQEMVRRGLNVDMFTLASVLT--AFTCLEDLSGGLQFHGQLIKTGFHQNS 275 Query: 413 EHYSCMIDLLGR-AGKLDEAERLIETMPFDPCSISWGALL 529 S +IDL + G + + ++ E + +P + W ++ Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEIT-EPDLVLWNTMV 314 Score = 70.1 bits (170), Expect = 5e-10 Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 33/220 (15%) Frame = +2 Query: 14 VISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQTMPEH 193 ++ C S GK LHSL +KS IP + SN I +YSKCG L AR+ FQ + + Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTY-FSNHFILLYSKCGRLAWARKAFQDISDP 72 Query: 194 NTVSFNSIIAGYAQHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVDEGWKYF 373 N SFN+IIA YA+ + +F ++ E P +++ +++S+ A G F Sbjct: 73 NVFSFNAIIAAYAKESRPLIAHQLFDQIPE----PDLVSYNTLISAYADCGETAPALGLF 128 Query: 374 NMMKEKFGIEPDAEHYSCMI---------------------------------DLLGRAG 454 + M+E G++ D S +I G+ G Sbjct: 129 SGMRE-MGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNG 187 Query: 455 KLDEAERLIETMPFDPCSISWGALLGACRTHGNVELGAKA 574 LD+A+R+ M +SW +++ A +G + G+KA Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVA---YGQHQEGSKA 224 >emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] Length = 719 Score = 404 bits (1037), Expect = e-110 Identities = 195/245 (79%), Positives = 216/245 (88%) Frame = +2 Query: 2 SFVCVISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQT 181 SFVCVISACSNLSSPSQGKQ+HSLALKSDIP NRISV NALIAMYSKCGNLQDARRLF Sbjct: 345 SFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDR 404 Query: 182 MPEHNTVSFNSIIAGYAQHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVDEG 361 M EHNTVS NS+IAGYAQHG +SL +FQ MLE ++ PTSITF+SVLS+CAHTG V+EG Sbjct: 405 MAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG 464 Query: 362 WKYFNMMKEKFGIEPDAEHYSCMIDLLGRAGKLDEAERLIETMPFDPCSISWGALLGACR 541 W YFNMMKEKF IEP+AEHYSCMIDLLGRAGKL EAE LI MPF+P SI W +LLGACR Sbjct: 465 WNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACR 524 Query: 542 THGNVELGAKAASHCLRLEPNNAAPYVMLANIYASAGRWEEYATVKRLMRDRGVKKKPGC 721 THGN+EL KAA+ L+LEP+NAAPYV+L+N+YASAGRWEE ATV++ MRDRGVKKKPGC Sbjct: 525 THGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGC 584 Query: 722 SWIEV 736 SWIEV Sbjct: 585 SWIEV 589 Score = 71.6 bits (174), Expect = 2e-10 Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 3/160 (1%) Frame = +2 Query: 59 QLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQTMPE-HNTVSFNSIIAGYAQ 235 QLHS+A+ S + +SV+NAL+ Y K G+L DA+R+F M + VS+NS+I Y Q Sbjct: 159 QLHSVAVSSGFD-SYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQ 217 Query: 236 HGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVD-EGWKYFNMMKEKFGIEPDA 412 H G+K+L +FQ+M+ + T SVL+ A T + D G F+ K G ++ Sbjct: 218 HQEGSKALGLFQEMVRRGLNVDMFTLASVLT--AFTCLEDLSGGLQFHGQLIKTGFHQNS 275 Query: 413 EHYSCMIDLLGR-AGKLDEAERLIETMPFDPCSISWGALL 529 S +IDL + G + + ++ E + +P + W ++ Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEIT-EPDLVLWNTMV 314 Score = 69.7 bits (169), Expect = 6e-10 Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 33/220 (15%) Frame = +2 Query: 14 VISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQTMPEH 193 ++ C S GK LHSL +KS IP + SN I +YSKCG L AR+ FQ + + Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTY-FSNHFILLYSKCGRLAWARKAFQDISDP 72 Query: 194 NTVSFNSIIAGYAQHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVDEGWKYF 373 N SFN+IIA YA+ + +F ++ E P +++ +++S+ A G F Sbjct: 73 NVFSFNAIIAAYAKESRPLIAHQLFDQIPE----PDLVSYNTLISAYADCGETAPALGLF 128 Query: 374 NMMKEKFGIEPDAEHYSCMI---------------------------------DLLGRAG 454 + M+E G++ D S +I G+ G Sbjct: 129 SGMRE-MGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNG 187 Query: 455 KLDEAERLIETMPFDPCSISWGALLGACRTHGNVELGAKA 574 LD+A+R+ M +SW +++ A +G + G+KA Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVA---YGQHQEGSKA 224 >ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like [Glycine max] Length = 722 Score = 391 bits (1005), Expect = e-107 Identities = 186/245 (75%), Positives = 214/245 (87%) Frame = +2 Query: 2 SFVCVISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQT 181 SFVCV SACSNLSSPS GKQ+H+LA+KSD+P NR+SV+NAL+AMYSKCGN+ DARR+F T Sbjct: 348 SFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDT 407 Query: 182 MPEHNTVSFNSIIAGYAQHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVDEG 361 MPEHNTVS NS+IAGYAQHG +SL +F+ MLE ++ P SITF++VLS+C HTG V+EG Sbjct: 408 MPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEG 467 Query: 362 WKYFNMMKEKFGIEPDAEHYSCMIDLLGRAGKLDEAERLIETMPFDPCSISWGALLGACR 541 KYFNMMKE+F IEP+AEHYSCMIDLLGRAGKL EAER+IETMPF+P SI W LLGACR Sbjct: 468 QKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACR 527 Query: 542 THGNVELGAKAASHCLRLEPNNAAPYVMLANIYASAGRWEEYATVKRLMRDRGVKKKPGC 721 HGNVEL KAA+ LRLEP NAAPYVML+N+YASA RWEE ATVKRLMR+RGVKKKPGC Sbjct: 528 KHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGC 587 Query: 722 SWIEV 736 SWIE+ Sbjct: 588 SWIEI 592 Score = 64.3 bits (155), Expect = 2e-08 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 34/216 (15%) Frame = +2 Query: 2 SFVCVISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDA------ 163 +F ++ AC GK LH+L KS IP + +SN +YSKCG+L +A Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTY-LSNHFTLLYSKCGSLHNAQTSFHL 69 Query: 164 -------------------------RRLFQTMPEHNTVSFNSIIAGYAQHGHGTKSLLMF 268 RR+F +P+ + VS+N++IA YA G +L +F Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLF 129 Query: 269 QKMLELEVLPTSITFVSVLSSCA-HTGMVDEGWKYFNMMKEKFGIEPDAEHYSCMIDLLG 445 +++ EL + T V+++C G+V + + G + A + ++ Sbjct: 130 EEVRELRLGLDGFTLSGVITACGDDVGLV----RQLHCFVVVCGHDCYASVNNAVLACYS 185 Query: 446 RAGKLDEAERLIETM--PFDPCSISWGALLGACRTH 547 R G L EA R+ M +SW A++ AC H Sbjct: 186 RKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQH 221 Score = 60.5 bits (145), Expect = 4e-07 Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 5/146 (3%) Frame = +2 Query: 107 SVSNALIAMYSKCGNLQDARRLFQTMPE---HNTVSFNSIIAGYAQHGHGTKSLLMFQKM 277 SV+NA++A YS+ G L +ARR+F+ M E + VS+N++I QH G +++ +F++M Sbjct: 175 SVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREM 234 Query: 278 LELEVLPTSITFVSVLSSCAHTGMVD-EGWKYFNMMKEKFGIEPDAEHYSCMIDLLGR-A 451 + + T SVL+ A T + D G + F+ M K G ++ S +IDL + A Sbjct: 235 VRRGLKVDMFTMASVLT--AFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292 Query: 452 GKLDEAERLIETMPFDPCSISWGALL 529 G + E ++ E + P + W ++ Sbjct: 293 GSMVECRKVFEEIT-APDLVLWNTMI 317 >ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like [Glycine max] Length = 722 Score = 386 bits (991), Expect = e-105 Identities = 183/245 (74%), Positives = 213/245 (86%) Frame = +2 Query: 2 SFVCVISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQT 181 SFVCV SACSNLSSPS GKQ+H+LA+KSDIP NR+SV+NAL+AMYSKCGN+ DARR+F T Sbjct: 348 SFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDT 407 Query: 182 MPEHNTVSFNSIIAGYAQHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVDEG 361 MPEHN VS NS+IAGYAQHG +SL +F+ ML+ ++ P +ITF++VLS+C HTG V+EG Sbjct: 408 MPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG 467 Query: 362 WKYFNMMKEKFGIEPDAEHYSCMIDLLGRAGKLDEAERLIETMPFDPCSISWGALLGACR 541 KYFNMMKE+F IEP+AEHYSCMIDLLGRAGKL EAER+IETMPF+P SI W LLGACR Sbjct: 468 QKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACR 527 Query: 542 THGNVELGAKAASHCLRLEPNNAAPYVMLANIYASAGRWEEYATVKRLMRDRGVKKKPGC 721 HGNVEL KAA+ L+LEP NAAPYVML+N+YASA RWEE ATVKRLMR+RGVKKKPGC Sbjct: 528 KHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGC 587 Query: 722 SWIEV 736 SWIE+ Sbjct: 588 SWIEI 592 Score = 58.9 bits (141), Expect = 1e-06 Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 5/146 (3%) Frame = +2 Query: 107 SVSNALIAMYSKCGNLQDARRLFQTMPE---HNTVSFNSIIAGYAQHGHGTKSLLMFQKM 277 SV+NA++A YS+ G L +ARR+F+ M E + VS+N++I QH G +++ +F++M Sbjct: 175 SVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREM 234 Query: 278 LELEVLPTSITFVSVLSSCAHTGMVD-EGWKYFNMMKEKFGIEPDAEHYSCMIDLLGR-A 451 + + T SVL+ A T + D G F+ M K G ++ S +IDL + A Sbjct: 235 VRRGLKVDMFTMASVLT--AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292 Query: 452 GKLDEAERLIETMPFDPCSISWGALL 529 G + E ++ E + P + W ++ Sbjct: 293 GGMVECRKVFEEIA-APDLVLWNTMI 317 >ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g49710-like [Cucumis sativus] Length = 720 Score = 379 bits (973), Expect = e-103 Identities = 182/245 (74%), Positives = 214/245 (87%) Frame = +2 Query: 2 SFVCVISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQT 181 S VCVISACSN+SSPSQG+Q+H LALK DIP NRISV+NALIAMYSKCGNL+DA+ LF T Sbjct: 345 SLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDT 404 Query: 182 MPEHNTVSFNSIIAGYAQHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVDEG 361 MPEHNTVS+NS+IAGYAQHG G +SL +FQ+MLE++ PT+ITF+SVL++CAHTG V++G Sbjct: 405 MPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDG 464 Query: 362 WKYFNMMKEKFGIEPDAEHYSCMIDLLGRAGKLDEAERLIETMPFDPCSISWGALLGACR 541 YFNMMK+KFGIEP+A H+SCMIDLLGRAGKL EAERLIET+PFDP W ALLGACR Sbjct: 465 KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACR 524 Query: 542 THGNVELGAKAASHCLRLEPNNAAPYVMLANIYASAGRWEEYATVKRLMRDRGVKKKPGC 721 HGNVEL KAA+ L+L+P NAAPYVMLANIY+ GR ++ A+V++LMRDRGVKKKPGC Sbjct: 525 IHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGC 584 Query: 722 SWIEV 736 SWIEV Sbjct: 585 SWIEV 589 Score = 67.0 bits (162), Expect = 4e-09 Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 32/214 (14%) Frame = +2 Query: 2 SFVCVISACSNLSSPSQGKQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQT 181 SF + C GK LH+L +KS +P + +SN + +YSKC L ARR+F Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTY-LSNHFLLLYSKCRRLSAARRVFDH 68 Query: 182 MPEHNTVSFNSIIAGYAQHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVDEG 361 + N SFN++I+ YA+ + + +F +M + P S+++ +++++ A G Sbjct: 69 THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ----PDSVSYNTLIAAYARRGDTQPA 124 Query: 362 WKYFNMMKEKF--------------------------------GIEPDAEHYSCMIDLLG 445 ++ F M+E F G++ + +I Sbjct: 125 FQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYS 184 Query: 446 RAGKLDEAERLIETMPFDPCSISWGALLGACRTH 547 + G L EA R+ + D +SW +++ A H Sbjct: 185 KNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQH 218 Score = 67.0 bits (162), Expect = 4e-09 Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 2/135 (1%) Frame = +2 Query: 56 KQLHSLALKSDIPINRISVSNALIAMYSKCGNLQDARRLFQTMPE-HNTVSFNSIIAGYA 232 +QLH+L++ + + + +SV NALI YSK G L++ARR+F + E + VS+NS++ Y Sbjct: 158 RQLHALSVVTGLD-SYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYM 216 Query: 233 QHGHGTKSLLMFQKMLELEVLPTSITFVSVLSSCAHTGMVD-EGWKYFNMMKEKFGIEPD 409 QH G+K+L ++ +M ++ T SVL+ A T + D G F+ K G + Sbjct: 217 QHREGSKALELYLEMTVRGLIVDIFTLASVLT--AFTNVQDLLGGLQFHAKLIKSGYHQN 274 Query: 410 AEHYSCMIDLLGRAG 454 + S +IDL + G Sbjct: 275 SHVGSGLIDLYSKCG 289