BLASTX nr result
ID: Coptis24_contig00024089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00024089
(619 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30833.3| unnamed protein product [Vitis vinifera] 192 4e-47
ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containi... 192 4e-47
ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containi... 167 2e-39
ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containi... 149 5e-34
>emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 192 bits (488), Expect = 4e-47
Identities = 102/206 (49%), Positives = 143/206 (69%), Gaps = 1/206 (0%)
Frame = +2
Query: 2 LSTFGEQTKIPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYS 181
+ST + + P L T ++SLQA AH KN+ KGKEIH+ +L+N F++ P S+T+LIN+YS
Sbjct: 24 ISTAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYS 83
Query: 182 KCNRPDDAFAIFKN-APERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTY 358
KCN+ + A +IF + E N+F +NAII+G + NG +GFE YQ+M R++ V+PDK+T+
Sbjct: 84 KCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKM-RNEGVIPDKFTF 142
Query: 359 PCVIKACCDLGKVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSK 538
PC IKAC D V E++ IHG + K G + D FI S+L+ YLKF M AQ FE+L
Sbjct: 143 PCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP- 198
Query: 539 GEKDVVLWNSLINGYAQIRQFTEALD 616
+DVVLWN+++NGYAQI QF L+
Sbjct: 199 -IRDVVLWNAMVNGYAQIGQFEMVLE 223
Score = 86.3 bits (212), Expect = 4e-15
Identities = 57/187 (30%), Positives = 96/187 (51%)
Frame = +2
Query: 29 IPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAF 208
IP K T +++AC +VL+ K+IH + F +AL+N Y K + A
Sbjct: 136 IPDKF-TFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQ 191
Query: 209 AIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDL 388
F+ P R++ +WNA++ G G E ++ M ++VVP ++T V+ +
Sbjct: 192 VAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMN-DESVVPSRFTVTGVLSVFAVM 250
Query: 389 GKVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNS 568
G + R IHG +K G+D+ + +SLI Y K C+ +A +FE + EKD+ WNS
Sbjct: 251 GDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR--EKDIFSWNS 308
Query: 569 LINGYAQ 589
+++ + Q
Sbjct: 309 IVSVHEQ 315
Score = 79.3 bits (194), Expect = 5e-13
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 9/215 (4%)
Frame = +2
Query: 2 LSTF---GEQTKIPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALIN 172
L TF +++ +PS+ T+ L A ++ G+ IH + + +LI+
Sbjct: 222 LETFRRMNDESVVPSRF-TVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 173 LYSKCNRPDDAFAIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKY 352
+Y KC +DA IF+ E+++F WN+I++ G DG + + PD
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCG-DHDGTLRLLDRMLGAGIQPDLV 339
Query: 353 TYPCVIKACCDLGKVGEVRGIHGEVLKSGFDNDS------FIVSSLIYFYLKFSCMVEAQ 514
T V+ AC L + R IHG ++ SG D + +++I Y K M +A
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 515 HLFEQLSKGEKDVVLWNSLINGYAQIRQFTEALDV 619
+FE++S KDV WN +I GY EAL++
Sbjct: 400 LVFERMSN--KDVASWNIMIMGYGMHGYGNEALEM 432
Score = 62.4 bits (150), Expect = 6e-08
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Frame = +2
Query: 29 IPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDF------MDYPFSVTALINLYSKCN 190
I L T+ + L AC+H ++ G+EIH ++++ +D A+I++Y+KC
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 191 RPDDAFAIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVI 370
DA +F+ +++ WN +I G +G + E++ M + PD+ T+ V+
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRM-CEVQLKPDEVTFVGVL 452
Query: 371 KACCDLGKVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKG--- 541
AC G V + R + +KS +D V+ I Y +C+++ QL +
Sbjct: 453 SACSHAGFVSQGRNFLVQ-MKSKYD-----VAPTIEHY---TCVIDMLGRAGQLDEAYEL 503
Query: 542 ------EKDVVLWNSLI 574
E + V+W +L+
Sbjct: 504 ALTMPIEANPVVWRALL 520
>ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 192 bits (488), Expect = 4e-47
Identities = 102/206 (49%), Positives = 143/206 (69%), Gaps = 1/206 (0%)
Frame = +2
Query: 2 LSTFGEQTKIPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYS 181
+ST + + P L T ++SLQA AH KN+ KGKEIH+ +L+N F++ P S+T+LIN+YS
Sbjct: 24 ISTAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYS 83
Query: 182 KCNRPDDAFAIFKN-APERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTY 358
KCN+ + A +IF + E N+F +NAII+G + NG +GFE YQ+M R++ V+PDK+T+
Sbjct: 84 KCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKM-RNEGVIPDKFTF 142
Query: 359 PCVIKACCDLGKVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSK 538
PC IKAC D V E++ IHG + K G + D FI S+L+ YLKF M AQ FE+L
Sbjct: 143 PCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP- 198
Query: 539 GEKDVVLWNSLINGYAQIRQFTEALD 616
+DVVLWN+++NGYAQI QF L+
Sbjct: 199 -IRDVVLWNAMVNGYAQIGQFEMVLE 223
Score = 86.3 bits (212), Expect = 4e-15
Identities = 57/187 (30%), Positives = 96/187 (51%)
Frame = +2
Query: 29 IPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAF 208
IP K T +++AC +VL+ K+IH + F +AL+N Y K + A
Sbjct: 136 IPDKF-TFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQ 191
Query: 209 AIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDL 388
F+ P R++ +WNA++ G G E ++ M ++VVP ++T V+ +
Sbjct: 192 VAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMN-DESVVPSRFTVTGVLSVFAVM 250
Query: 389 GKVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNS 568
G + R IHG +K G+D+ + +SLI Y K C+ +A +FE + EKD+ WNS
Sbjct: 251 GDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR--EKDIFSWNS 308
Query: 569 LINGYAQ 589
+++ + Q
Sbjct: 309 IVSVHEQ 315
Score = 79.3 bits (194), Expect = 5e-13
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 9/215 (4%)
Frame = +2
Query: 2 LSTF---GEQTKIPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALIN 172
L TF +++ +PS+ T+ L A ++ G+ IH + + +LI+
Sbjct: 222 LETFRRMNDESVVPSRF-TVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 173 LYSKCNRPDDAFAIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKY 352
+Y KC +DA IF+ E+++F WN+I++ G DG + + PD
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCG-DHDGTLRLLDRMLGAGIQPDLV 339
Query: 353 TYPCVIKACCDLGKVGEVRGIHGEVLKSGFDNDS------FIVSSLIYFYLKFSCMVEAQ 514
T V+ AC L + R IHG ++ SG D + +++I Y K M +A
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 515 HLFEQLSKGEKDVVLWNSLINGYAQIRQFTEALDV 619
+FE++S KDV WN +I GY EAL++
Sbjct: 400 LVFERMSN--KDVASWNIMIMGYGMHGYGNEALEM 432
Score = 62.4 bits (150), Expect = 6e-08
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 15/197 (7%)
Frame = +2
Query: 29 IPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDF------MDYPFSVTALINLYSKCN 190
I L T+ + L AC+H ++ G+EIH ++++ +D A+I++Y+KC
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 191 RPDDAFAIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVI 370
DA +F+ +++ WN +I G +G + E++ M + PD+ T+ V+
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRM-CEVQLKPDEVTFVGVL 452
Query: 371 KACCDLGKVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKG--- 541
AC G V + R + +KS +D V+ I Y +C+++ QL +
Sbjct: 453 SACSHAGFVSQGRNFLVQ-MKSKYD-----VAPTIEHY---TCVIDMLGRAGQLDEAYEL 503
Query: 542 ------EKDVVLWNSLI 574
E + V+W +L+
Sbjct: 504 ALTMPIEANPVVWRALL 520
>ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 170 bits (431), Expect = 2e-40
Identities = 89/187 (47%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
Frame = +2
Query: 62 LQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAFAIFKN-APERN 238
LQ+CA +N+ KGK++H+ ++ F P S+T+LIN+YSKC + +A +F + ERN
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 239 LFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDLGKVGEVRGIH 418
+F +NAII+G V NGL+ GF+ Y++MR + V+PDKYT+PCV++ CC+ V EV+ IH
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRL-EGVMPDKYTFPCVVRTCCE---VMEVKKIH 133
Query: 419 GEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNSLINGYAQIRQ 598
G +LK G + D F+ S+L+ YLK M +AQ +F +LS +DVVLWN++INGYA+I
Sbjct: 134 GCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELS--IRDVVLWNAMINGYAKIGC 191
Query: 599 FTEALDV 619
EAL+V
Sbjct: 192 LDEALEV 198
Score = 80.9 bits (198), Expect = 2e-13
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Frame = +2
Query: 32 PSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAFA 211
PS+ T+ L A + ++ GK +H ++ + ALI++Y KC DA
Sbjct: 209 PSRF-TITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALI 267
Query: 212 IFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDLG 391
IF+ E+++F WN+II+ G L+ +M ++PD T V+ AC L
Sbjct: 268 IFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKM-LGSGILPDLVTITTVLPACSHLA 326
Query: 392 KVGEVRGIHGEVLKSGFDNDS--------FIVSSLIYFYLKFSCMVEAQHLFEQLSKGEK 547
+ R IHG ++ +G D + ++++ Y K M A +F+ +SK K
Sbjct: 327 ALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSK--K 384
Query: 548 DVVLWNSLINGYAQIRQFTEAL 613
DV WN +I GY EAL
Sbjct: 385 DVASWNIMIMGYGMHGYALEAL 406
Score = 77.8 bits (190), Expect = 1e-12
Identities = 48/167 (28%), Positives = 86/167 (51%)
Frame = +2
Query: 89 VLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAFAIFKNAPERNLFIWNAIIAG 268
V++ K+IH +L F +AL+N Y K +DA +F R++ +WNA+I G
Sbjct: 126 VMEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMING 185
Query: 269 SVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDLGKVGEVRGIHGEVLKSGFDN 448
G + E+++ M V P ++T ++ G + + +HG V+K G+D+
Sbjct: 186 YAKIGCLDEALEVFRRM-HVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDS 244
Query: 449 DSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNSLINGYAQ 589
+ ++LI Y K + +A +FE ++ EKD+ WNS+I+ + Q
Sbjct: 245 GVSVSNALIDMYGKCKHIGDALIIFEMIN--EKDIFSWNSIISVHEQ 289
Score = 58.9 bits (141), Expect = 7e-07
Identities = 42/191 (21%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Frame = +2
Query: 41 LRTLLSSLQACAHQKNVLKGKEIHATILLNDF--------MDYPFSVTALINLYSKCNRP 196
L T+ + L AC+H ++ G+EIH +++N +D A++++Y+KC
Sbjct: 312 LVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSM 371
Query: 197 DDAFAIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKA 376
++A IF + ++++ WN +I G +G + + ++ +M + P++ T V+ A
Sbjct: 372 NNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAE-FKPNEVTLVGVLSA 430
Query: 377 CCDLGKVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHL---FEQLSKG-- 541
C G V HG + + ++ ++ ++ ++ + A HL +E + K
Sbjct: 431 CNHAGFVS-----HGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPI 485
Query: 542 EKDVVLWNSLI 574
+ + V+W +L+
Sbjct: 486 QANPVVWRALL 496
>ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 167 bits (422), Expect = 2e-39
Identities = 89/196 (45%), Positives = 128/196 (65%), Gaps = 3/196 (1%)
Frame = +2
Query: 41 LRTLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAFAIFK 220
L T +++LQ+CAH N+ KGKE+H +L N F P ++T+LIN+YSKC+ D + +F
Sbjct: 29 LGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF- 87
Query: 221 NAP---ERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDLG 391
N P +N+F +NA+IAG + N L + LY +MR H + PDK+T+PCVI+AC D
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMR-HLGIAPDKFTFPCVIRACGDDD 146
Query: 392 KVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNSL 571
V IHG + K G + D F+ S+L+ YLKF + EA +FE+L +DVVLWN++
Sbjct: 147 DGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELP--VRDVVLWNAM 204
Query: 572 INGYAQIRQFTEALDV 619
+NG+AQI +F EAL V
Sbjct: 205 VNGFAQIGRFEEALGV 220
Score = 76.6 bits (187), Expect = 3e-12
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +2
Query: 98 GKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAFAIFKNAPERNLFIWNAIIAGSVG 277
G+ +H + + ALI++Y KC DA ++F+ E ++F WN+I++
Sbjct: 252 GRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHER 311
Query: 278 NGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDLGKVGEVRGIHGEVLKSGFD---- 445
G L+ M V PD T V+ AC L + R IHG ++ +G
Sbjct: 312 CGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEES 371
Query: 446 ----NDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNSLINGYAQIRQFTEAL 613
+D + ++L+ Y K M +A+ +F ++ EKDV WN +I GY EAL
Sbjct: 372 HDVFDDVLLNNALMDMYAKCGNMRDARMVF--VNMREKDVASWNIMITGYGMHGYGGEAL 429
Query: 614 DV 619
D+
Sbjct: 430 DI 431
Score = 75.9 bits (185), Expect = 6e-12
Identities = 46/172 (26%), Positives = 85/172 (49%)
Frame = +2
Query: 62 LQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAFAIFKNAPERNL 241
++AC + +IH + F +AL+N Y K +A+ +F+ P R++
Sbjct: 139 IRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDV 198
Query: 242 FIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDLGKVGEVRGIHG 421
+WNA++ G G + +++ M + VVP +YT V+ +G R +HG
Sbjct: 199 VLWNAMVNGFAQIGRFEEALGVFRRMGGN-GVVPCRYTVTGVLSIFSVMGDFDNGRAVHG 257
Query: 422 EVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNSLIN 577
V K G+++ + ++LI Y K C+ +A +FE + E D+ WNS+++
Sbjct: 258 FVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMD--EIDIFSWNSIMS 307
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Frame = +2
Query: 23 TKIPSKLRTLLSSLQACAHQKNVLKGKEIHATILLN--------DFMDYPFSVTALINLY 178
+++ L T+ + L AC H ++ G+EIH +++N D D AL+++Y
Sbjct: 329 SRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMY 388
Query: 179 SKCNRPDDAFAIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTY 358
+KC DA +F N E+++ WN +I G +G + +++ M + +VP++ ++
Sbjct: 389 AKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQ-AQMVPNEISF 447
Query: 359 PCVIKACCDLGKVGEVRGIHGEV 427
++ AC G V E G E+
Sbjct: 448 VGLLSACSHAGMVKEGLGFLSEM 470
>ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 149 bits (375), Expect = 5e-34
Identities = 76/168 (45%), Positives = 117/168 (69%), Gaps = 1/168 (0%)
Frame = +2
Query: 119 ILLNDFMDYPFSVTALINLYSKCNRPDDAFAIFKNA-PERNLFIWNAIIAGSVGNGLSRD 295
++ + F+ P S+T+LIN+YS+CN+ ++A +F++ ERN+F +NAIIAG V NGL+ D
Sbjct: 1 MVTSGFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAAD 60
Query: 296 GFELYQEMRRHDNVVPDKYTYPCVIKACCDLGKVGEVRGIHGEVLKSGFDNDSFIVSSLI 475
GF+ Y+ M R V+PDK+T+PCV++ACC+ EVR IHG + K G + + F+ S+L+
Sbjct: 61 GFQFYKRM-RSVGVMPDKFTFPCVVRACCEF---MEVRKIHGCLFKMGLELNVFVGSALV 116
Query: 476 YFYLKFSCMVEAQHLFEQLSKGEKDVVLWNSLINGYAQIRQFTEALDV 619
YLK +A+ +FE+L E+DVVLWN++INGY +I +A+ V
Sbjct: 117 NTYLKVDGTEDAEKVFEELP--ERDVVLWNAMINGYTKIGHLNKAVVV 162
Score = 87.0 bits (214), Expect = 2e-15
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Frame = +2
Query: 47 TLLSSLQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAFAIFKNA 226
T S L ++ G+ IH + + ALI++Y KC +DA IF+
Sbjct: 177 TTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMI 236
Query: 227 PERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDLGKVGEV 406
E++LF WN+II+ L+ +M V+PD T V+ AC L +
Sbjct: 237 NEKDLFSWNSIISAHEQCDDHDGTLRLFGKM-LGSRVLPDVITITAVLPACSHLAALMHG 295
Query: 407 RGIHGEVLKSGF-----DNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNSL 571
R IHG ++ +G +D + ++++ Y K CM A +F+ + KDV WN +
Sbjct: 296 REIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMR--NKDVASWNIM 353
Query: 572 INGYAQIRQFTEALDV 619
I GYA TEALD+
Sbjct: 354 IMGYAMHGYGTEALDM 369
Score = 76.3 bits (186), Expect = 4e-12
Identities = 49/176 (27%), Positives = 86/176 (48%)
Frame = +2
Query: 62 LQACAHQKNVLKGKEIHATILLNDFMDYPFSVTALINLYSKCNRPDDAFAIFKNAPERNL 241
++AC V K IH + F +AL+N Y K + +DA +F+ PER++
Sbjct: 84 VRACCEFMEVRK---IHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDV 140
Query: 242 FIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVVPDKYTYPCVIKACCDLGKVGEVRGIHG 421
+WNA+I G G +++ M + + ++T ++ +G + R IHG
Sbjct: 141 VLWNAMINGYTKIGHLNKAVVVFKRM-GEEGISLSRFTTTSILSILTSMGDINNGRAIHG 199
Query: 422 EVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHLFEQLSKGEKDVVLWNSLINGYAQ 589
V K G+ + + ++LI Y K +A +FE ++ EKD+ WNS+I+ + Q
Sbjct: 200 IVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMIN--EKDLFSWNSIISAHEQ 253
Score = 56.6 bits (135), Expect = 3e-06
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Frame = +2
Query: 2 LSTFGEQ--TKIPSKLRTLLSSLQACAHQKNVLKGKEIHATILLNDFM-----DYPFSVT 160
L FG+ +++ + T+ + L AC+H ++ G+EIH +++N D
Sbjct: 261 LRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNN 320
Query: 161 ALINLYSKCNRPDDAFAIFKNAPERNLFIWNAIIAGSVGNGLSRDGFELYQEMRRHDNVV 340
A++++Y+KC +A IF +++ WN +I G +G + +++ M +
Sbjct: 321 AIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRM-CEAQIK 379
Query: 341 PDKYTYPCVIKACCDLGKVGEVRGIHGEVLKSGFDNDSFIVSSLIYFYLKFSCMVEAQHL 520
PD T+ V+ AC G V + G + + + ++ ++ ++ + A HL
Sbjct: 380 PDVVTFVGVLSACSHAGFVHQ-----GRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHL 434
Query: 521 FE-----QLSKGEKDVVLWNSLI 574
E Q E +++LW +L+
Sbjct: 435 GEAYDLAQRIPLEDNLILWMALL 457