BLASTX nr result

ID: Coptis24_contig00024085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024085
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520754.1| conserved hypothetical protein [Ricinus comm...   149   5e-34
ref|XP_002307577.1| predicted protein [Populus trichocarpa] gi|2...   146   5e-33
ref|XP_003554247.1| PREDICTED: uncharacterized protein LOC100781...   141   1e-31
emb|CBI32340.3| unnamed protein product [Vitis vinifera]              136   4e-30
ref|XP_003520209.1| PREDICTED: uncharacterized protein LOC100786...   133   4e-29

>ref|XP_002520754.1| conserved hypothetical protein [Ricinus communis]
           gi|223540139|gb|EEF41716.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score =  149 bits (377), Expect = 5e-34
 Identities = 89/192 (46%), Positives = 113/192 (58%), Gaps = 5/192 (2%)
 Frame = +2

Query: 116 VGFEEGRVWLPTHVLDEA-FESKENRWPQQEQRRYHRTMDPSVDKIHRNNHPFNKSNPKF 292
           VGFEEG   LP+HVL EA +E+KE     Q+         P +    +     +KSNP+ 
Sbjct: 9   VGFEEGMSCLPSHVLHEAIWETKEYYGQSQQHHHQQYRHLPQLPLQPQQQQLRSKSNPRA 68

Query: 293 HSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFFLPQMIGNNSQMSKKPICSPVLLPARV 472
           HSRT+  ++   GG+GM+AIFLDS ++ CGTG FLP+  G N   SKKP CSPVLLPARV
Sbjct: 69  HSRTRHPTNGASGGSGMRAIFLDSGKQTCGTGVFLPRRAGTNLPFSKKPACSPVLLPARV 128

Query: 473 IHALNLDVHTLASQISPRKNP----DSNLKRRIRGSKLGIEELESKVTTQSCVASAVRRT 640
           + ALNL++H    QIS RK+     D NL +  R  K G        + Q CV S    +
Sbjct: 129 VQALNLNIHETGLQISRRKDASRSGDCNLIKN-RTGKDG--------SAQCCVVSQNENS 179

Query: 641 SPEIYLPKEWSY 676
           SPEI LPKEW+Y
Sbjct: 180 SPEILLPKEWTY 191


>ref|XP_002307577.1| predicted protein [Populus trichocarpa] gi|222857026|gb|EEE94573.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  146 bits (368), Expect = 5e-33
 Identities = 88/190 (46%), Positives = 118/190 (62%), Gaps = 3/190 (1%)
 Frame = +2

Query: 116 VGFEEGRVWLPTHVLDEA-FESKENRWPQQEQRRYHRTMDPSVDKIHRNNHPFN-KSNPK 289
           VGFEE    LP+HVLDEA ++SKE     ++   +H     S+ K+ ++ HP   KS+P+
Sbjct: 9   VGFEETISCLPSHVLDEAIWDSKEY---VKQHHHHHHHQYRSLPKLPQDPHPQRPKSSPR 65

Query: 290 FHSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFFLPQMIGNNSQMSKKPICSPVLLPAR 469
              RTK  ++   GG GMQA+FLDS +K  GTG FLPQ  G N Q SKKP C+PVLLPAR
Sbjct: 66  PDCRTKYATNWASGGPGMQAVFLDSGKKSSGTGVFLPQRAGTNMQSSKKPACAPVLLPAR 125

Query: 470 VIHALNLDVHTLASQISPRKNPDSNLKRRIRGSKLGIEELESK-VTTQSCVASAVRRTSP 646
           V+ ALN++VH +   IS R++  +  K R   S    ++  SK V+ Q  VA     +SP
Sbjct: 126 VVQALNINVHEIGLHISRRQDAKNKSKGRDCNS---FKKKNSKDVSAQCAVAINNENSSP 182

Query: 647 EIYLPKEWSY 676
           EI+LPKEW+Y
Sbjct: 183 EIFLPKEWTY 192


>ref|XP_003554247.1| PREDICTED: uncharacterized protein LOC100781513 [Glycine max]
          Length = 190

 Score =  141 bits (356), Expect = 1e-31
 Identities = 88/201 (43%), Positives = 111/201 (55%), Gaps = 9/201 (4%)
 Frame = +2

Query: 101 EDIVAVGFEEGRVWLPTHVLDEAFESK---ENRWPQQEQRRYHRTMDPSVDKIHRNNHPF 271
           +D   VGFEEG +WLP+HVLDEA +SK    NR  +Q Q  YHR    +  +    ++ F
Sbjct: 6   DDAAEVGFEEGMLWLPSHVLDEACDSKIHMRNRHQKQRQHGYHRYQRETQSQC---SNLF 62

Query: 272 NKSNPKFHSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFFLPQMIGNNSQMSKKPICSP 451
            +S+ +       +     GG GMQA+FL S Q  CGTG FLPQ  G  S  + KP C+P
Sbjct: 63  TRSSCQ-------RPKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAGTKS--TSKPACAP 113

Query: 452 VLLPARVIHALNLDVHTLASQISPRKNPDSNLKRRIRGSKLGIEELESKVTTQS------ 613
           VLLPARV+ ALNL VH L  QISP + P    K   R   +   E   K T Q       
Sbjct: 114 VLLPARVVQALNLKVHQLGLQISPSQAP----KYSSRSGVVSTSESTKKKTDQKDALMQC 169

Query: 614 CVASAVRRTSPEIYLPKEWSY 676
            V S  + +SPEI+LPKEW+Y
Sbjct: 170 SVVSQSQSSSPEIFLPKEWTY 190


>emb|CBI32340.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score =  136 bits (343), Expect = 4e-30
 Identities = 86/233 (36%), Positives = 124/233 (53%), Gaps = 40/233 (17%)
 Frame = +2

Query: 98  MEDIVAVGFEEGRVWLPTHVLDEAFES--KENRWPQQEQRRYH---RTMDPSVDKIHRNN 262
           +E+ + VGFEE   WLP+HV+ EA +S  K N   +  + R H      DP+V    R N
Sbjct: 3   IEEDIQVGFEEAMSWLPSHVVAEACDSNFKVNLRNESHRERRHGLKSAADPAVPV--RKN 60

Query: 263 HPF----------------NKSNPKFHSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFF 394
           HP+                +K + K H +++  ++   GG GMQAIFLDS ++ CGTG F
Sbjct: 61  HPYLINCLFLLLMMMMKQHSKYSLKPHQKSRFPTNWASGGPGMQAIFLDSGRRSCGTGVF 120

Query: 395 LPQMIGNNSQMSKKPICSPVLLPARVIHALNLDVHTLASQISPRKNPDS-----NLKRRI 559
           LP+  G N Q SKKP CSPVLLP+RV+HALNL+VH L  Q+SP+K   S     + +  +
Sbjct: 121 LPRRAGTNFQPSKKPACSPVLLPSRVVHALNLNVHALGLQVSPQKGLFSIDFLIDSRDLL 180

Query: 560 RGSKLGIEELESKVTTQSCVAS--------------AVRRTSPEIYLPKEWSY 676
             + + +    + VT  +   +              +  + S EI+LPKEW+Y
Sbjct: 181 LTTSIHVHSSLADVTNSNNPKAGNPISVGNKNGKEVSTHQNSQEIFLPKEWTY 233


>ref|XP_003520209.1| PREDICTED: uncharacterized protein LOC100786285 [Glycine max]
          Length = 194

 Score =  133 bits (334), Expect = 4e-29
 Identities = 82/198 (41%), Positives = 112/198 (56%), Gaps = 11/198 (5%)
 Frame = +2

Query: 116 VGFEEGRVWLPTHVLDEAFESKENRWPQQEQRRYHRTMDPSVDKIHRNNHPFNKSNPKF- 292
           VGFEEG +WLP+HVLDEA ++K     + ++ + H+ M       H+  H  +   PK  
Sbjct: 10  VGFEEGMLWLPSHVLDEACDTKVCLRNRHQKLQNHQQM-------HQKRHHKSPGEPKSQ 62

Query: 293 -----HSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFFLPQMIGNNSQMSKKPICSPVL 457
                + R KL ++ GPG   M+AIFL S  + CGTG FLPQ  G N Q SK+P C+P+L
Sbjct: 63  YSKSAYQRPKLATNGGPG---MRAIFLGSGHRSCGTGVFLPQRAGTNFQPSKRPACAPIL 119

Query: 458 LPARVIHALNLDVHTLASQISP----RKNPDSNLKRRIRGSKLGIEELESKVTTQSC-VA 622
           LPARV+ ALNL+V  L   ISP    R NP     R    +    ++ + K  ++ C   
Sbjct: 120 LPARVVQALNLNVQALGVLISPPQVQRYNPRC---REAYNNNSTEKKSDQKDASKQCRFI 176

Query: 623 SAVRRTSPEIYLPKEWSY 676
           S    +SPEI+LPKEW+Y
Sbjct: 177 SQNECSSPEIFLPKEWTY 194


Top