BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024084
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu...   100   2e-19
ref|XP_003632462.1| PREDICTED: upstream activation factor subuni...    96   4e-18
emb|CBI23284.3| unnamed protein product [Vitis vinifera]               96   4e-18
emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]    96   4e-18
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni...    95   7e-18

>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
           communis] gi|223538407|gb|EEF40013.1| Upstream
           activation factor subunit UAF30, putative [Ricinus
           communis]
          Length = 322

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/63 (80%), Positives = 54/63 (85%)
 Frame = -1

Query: 359 MVSDSELILRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHSQVE 180
           MVSDSELI RLREFLK SDLNTTT  IVRR+LEEDFGIDLSDKKAFIR QVD+F+ SQ E
Sbjct: 1   MVSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSDKKAFIREQVDLFLQSQFE 60

Query: 179 NFD 171
             D
Sbjct: 61  END 63


>ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
           vinifera]
          Length = 296

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = -1

Query: 359 MVSDSELILRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHSQVE 180
           MVSDSEL+ RL EFL++SDLNTTT AIVRRKLEEDFGIDLS KKAFIR  VD+F+ SQ+E
Sbjct: 1   MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60


>emb|CBI23284.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = -1

Query: 359 MVSDSELILRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHSQVE 180
           MVSDSEL+ RL EFL++SDLNTTT AIVRRKLEEDFGIDLS KKAFIR  VD+F+ SQ+E
Sbjct: 1   MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60


>emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
          Length = 332

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = -1

Query: 359 MVSDSELILRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHSQVE 180
           MVSDSEL+ RL EFL++SDLNTTT AIVRRKLEEDFGIDLS KKAFIR  VD+F+ SQ+E
Sbjct: 1   MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60


>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
           sativus]
          Length = 332

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = -1

Query: 359 MVSDSELILRLREFLKTSDLNTTTNAIVRRKLEEDFGIDLSDKKAFIRSQVDIFIHSQVE 180
           MVSDSELI RLR+FL+ SDLNTTT AIVRRKLEEDFGIDLSDKK FIR QVD+F+ ++ E
Sbjct: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60