BLASTX nr result

ID: Coptis24_contig00024065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024065
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37639.3| unnamed protein product [Vitis vinifera]              405   e-111
ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253...   397   e-108
ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago t...   396   e-108
ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788...   383   e-104
ref|XP_004146214.1| PREDICTED: uncharacterized protein LOC101213...   373   e-101

>emb|CBI37639.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score =  405 bits (1041), Expect = e-111
 Identities = 204/300 (68%), Positives = 246/300 (82%)
 Frame = +3

Query: 36   KEEVDLKLSGMKWRDRHQQTAVEYETNRAHNLPEQIDILDISSGVLQLAGSSVVPESISK 215
            KE  DL  S  KWR+   + A     +++    +Q ++LDISSG+L LAG S++P+SI+K
Sbjct: 929  KEATDLMNSESKWRNNCPKIA---SGDKSQKFNDQYNVLDISSGILHLAGDSLIPQSITK 985

Query: 216  DCLKDAKILIQLDKKFIPVVAGMTLAVIDQHAADERIRLEEFRRKVLSGEGKSVSYLESE 395
            +CL+DAK+L Q+DKKFIPVVA  TLA+IDQHAADERIRLEE R+KVLSGE K+++YL++E
Sbjct: 986  NCLQDAKVLQQVDKKFIPVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAE 1045

Query: 396  QDLVLPEAGFQLLQNYSEQIQKWGWICNVHAQGSGSFTKNLNLLNRQTSVATLLAVPCIL 575
            Q+LVLPE G+QLL  Y+EQIQ WGWICN+HAQ S SFTKNL+LL+++ +V TLLAVPCIL
Sbjct: 1046 QELVLPEIGYQLLHTYAEQIQNWGWICNIHAQNSRSFTKNLDLLHKKPTVITLLAVPCIL 1105

Query: 576  GVNLSNNDLLEFLDQLAETDGSSTLPPSVVRVLNSKACRSAIMFGDALLPSECSLIIEEL 755
            GVNLS+ DLLEFL QLA+TDGSST+PPSV+RVLN KACR AIMFGDALLPSECSLI+EEL
Sbjct: 1106 GVNLSDVDLLEFLQQLADTDGSSTMPPSVLRVLNLKACRGAIMFGDALLPSECSLIVEEL 1165

Query: 756  KQTSLCFQCAHGRPTTVPIVNLEALRKQIDNLNTWNVCSRQPWHGLVRHRPSLERARQRL 935
            K+TSLCFQCAHGRPTTVP+VNLEAL KQI  L +    S + WHGL RH  SLERA  RL
Sbjct: 1166 KRTSLCFQCAHGRPTTVPLVNLEALHKQIAKLGSGGGGSIELWHGLRRHELSLERAAHRL 1225


>ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253902 [Vitis vinifera]
          Length = 1218

 Score =  397 bits (1021), Expect = e-108
 Identities = 204/309 (66%), Positives = 246/309 (79%), Gaps = 9/309 (2%)
 Frame = +3

Query: 36   KEEVDLKLSGMKWRDRHQQTAVEYETNRAHNLPEQIDILDISSGVLQLAGSSVVPESISK 215
            KE  DL  S  KWR+   + A     +++    +Q ++LDISSG+L LAG S++P+SI+K
Sbjct: 908  KEATDLMNSESKWRNNCPKIA---SGDKSQKFNDQYNVLDISSGILHLAGDSLIPQSITK 964

Query: 216  DCLKDAKILIQLDKKFIPVVAGMTLAVIDQHAADERIRLEEFRRKVLSGEGKSVSYLESE 395
            +CL+DAK+L Q+DKKFIPVVA  TLA+IDQHAADERIRLEE R+KVLSGE K+++YL++E
Sbjct: 965  NCLQDAKVLQQVDKKFIPVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAE 1024

Query: 396  QDLV---------LPEAGFQLLQNYSEQIQKWGWICNVHAQGSGSFTKNLNLLNRQTSVA 548
            Q+LV         LPE G+QLL  Y+EQIQ WGWICN+HAQ S SFTKNL+LL+++ +V 
Sbjct: 1025 QELVCLCFMLFEVLPEIGYQLLHTYAEQIQNWGWICNIHAQNSRSFTKNLDLLHKKPTVI 1084

Query: 549  TLLAVPCILGVNLSNNDLLEFLDQLAETDGSSTLPPSVVRVLNSKACRSAIMFGDALLPS 728
            TLLAVPCILGVNLS+ DLLEFL QLA+TDGSST+PPSV+RVLN KACR AIMFGDALLPS
Sbjct: 1085 TLLAVPCILGVNLSDVDLLEFLQQLADTDGSSTMPPSVLRVLNLKACRGAIMFGDALLPS 1144

Query: 729  ECSLIIEELKQTSLCFQCAHGRPTTVPIVNLEALRKQIDNLNTWNVCSRQPWHGLVRHRP 908
            ECSLI+EELK+TSLCFQCAHGRPTTVP+VNLEAL KQI  L +    S + WHGL RH  
Sbjct: 1145 ECSLIVEELKRTSLCFQCAHGRPTTVPLVNLEALHKQIAKLGSGGGGSIELWHGLRRHEL 1204

Query: 909  SLERARQRL 935
            SLERA  RL
Sbjct: 1205 SLERAAHRL 1213


>ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago truncatula]
            gi|355513703|gb|AES95326.1| MutL DNA mismatch repair
            protein [Medicago truncatula]
          Length = 1293

 Score =  396 bits (1017), Expect = e-108
 Identities = 200/312 (64%), Positives = 239/312 (76%), Gaps = 10/312 (3%)
 Frame = +3

Query: 30   IQKEEVDLKLSGMKWRDRHQQTAVEYETNRAHNLPEQIDILDISSGVLQLAGSSVVPESI 209
            I KE  D    G KWR    QT V    N   ++  Q +ILDISSG L LAG S++P++I
Sbjct: 977  ISKEVQDSVDYGTKWRSCAPQTPVMLSKNDKIDIQSQNNILDISSGFLHLAGDSLIPDTI 1036

Query: 210  SKDCLKDAKILIQLDKKFIPVVAGMTLAVIDQHAADERIRLEEFRRKVLSGEGKSVSYLE 389
            SK CL+DAK+L Q+DKKFIP++AG TLAVIDQHA DERIRLE+ R+KVLSGE K+++YL+
Sbjct: 1037 SKKCLEDAKVLHQVDKKFIPIMAGRTLAVIDQHAGDERIRLEDLRQKVLSGEAKAITYLD 1096

Query: 390  SEQDLVLPEAGFQLLQNYSEQIQKWGWICNVHAQGSGSFTK----------NLNLLNRQT 539
            +EQ+LVLPE G+QLL +Y EQI+ WGWICN+H Q S SF +          NL+LLNRQ 
Sbjct: 1097 AEQELVLPEIGYQLLHSYREQIKDWGWICNIHTQNSESFRRYISQAVLLIRNLDLLNRQQ 1156

Query: 540  SVATLLAVPCILGVNLSNNDLLEFLDQLAETDGSSTLPPSVVRVLNSKACRSAIMFGDAL 719
                L+AVPCILGVNL++ DLLEFL QLA+TDGSST+PPSVVR+LNSK+CR AIMFGD+L
Sbjct: 1157 MTIALVAVPCILGVNLNDVDLLEFLQQLADTDGSSTMPPSVVRLLNSKSCRGAIMFGDSL 1216

Query: 720  LPSECSLIIEELKQTSLCFQCAHGRPTTVPIVNLEALRKQIDNLNTWNVCSRQPWHGLVR 899
            LPSECSL++EELK TSLCFQCAHGRPTTVP+VNLEALR QID L   N  S   WHGL R
Sbjct: 1217 LPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALRNQIDKLGLMNKSSSNKWHGLQR 1276

Query: 900  HRPSLERARQRL 935
            H  S++RA QRL
Sbjct: 1277 HEVSIDRAVQRL 1288


>ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788019 [Glycine max]
          Length = 1208

 Score =  383 bits (983), Expect = e-104
 Identities = 196/308 (63%), Positives = 235/308 (76%), Gaps = 17/308 (5%)
 Frame = +3

Query: 63   GMKWRDRHQQTAVEYETNRAHNLPEQIDILDISSGVLQLAGSSVVPESISKDCLKDAKIL 242
            G KWR+   +     + ++  N+  Q +ILDISSG L LAG S++PE+ISK CL+DAK+L
Sbjct: 898  GTKWRNCSPKIT---KNDKLANIQSQNNILDISSGFLHLAGDSLIPETISKKCLEDAKVL 954

Query: 243  IQLDKKFIPVVAGMTLAVIDQHAADERIRLEEFRRKVLSGEGKSVSYLESEQDLV----- 407
             Q+DKKFIPVVAG TLAVIDQHAADERIRLEE R+KVLSGE K+++YL++EQ+LV     
Sbjct: 955  HQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEEKAITYLDAEQELVCIYES 1014

Query: 408  ------------LPEAGFQLLQNYSEQIQKWGWICNVHAQGSGSFTKNLNLLNRQTSVAT 551
                        LPE G+QLL +YSEQI+ WGWICN+HAQ S SF ++L++LNR     T
Sbjct: 1015 ENLICMIMVIQVLPEIGYQLLHSYSEQIKDWGWICNIHAQNSESFRRSLDILNRPQMAVT 1074

Query: 552  LLAVPCILGVNLSNNDLLEFLDQLAETDGSSTLPPSVVRVLNSKACRSAIMFGDALLPSE 731
            L+AVPCILGV L++ DLLEFL QLA+TDGSST+PPSV+RVLN KACR AIMFGD+LLPSE
Sbjct: 1075 LIAVPCILGVKLNDVDLLEFLQQLADTDGSSTIPPSVLRVLNLKACRGAIMFGDSLLPSE 1134

Query: 732  CSLIIEELKQTSLCFQCAHGRPTTVPIVNLEALRKQIDNLNTWNVCSRQPWHGLVRHRPS 911
            CSLI+EELK TSLCFQCAHGRPTTVP+VNLEAL  QI  L   N  S   WHGL RH+  
Sbjct: 1135 CSLIVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLRLMNERSSDEWHGLHRHKVC 1194

Query: 912  LERARQRL 935
            +ERA QRL
Sbjct: 1195 IERAAQRL 1202


>ref|XP_004146214.1| PREDICTED: uncharacterized protein LOC101213777 [Cucumis sativus]
          Length = 1238

 Score =  373 bits (958), Expect = e-101
 Identities = 184/273 (67%), Positives = 227/273 (83%), Gaps = 1/273 (0%)
 Frame = +3

Query: 120  AHNLPEQIDILDISSGVLQLAGSSVVPESISKDCLKDAKILIQLDKKFIPVVAGMTLAVI 299
            +H   +++ ILDISSG L LA +S+VP+SI K+ L+DAK+L+QLDKKFIPVV+G  LAVI
Sbjct: 960  SHAFDDEVSILDISSGFLSLASNSLVPDSIDKNFLEDAKVLLQLDKKFIPVVSGGILAVI 1019

Query: 300  DQHAADERIRLEEFRRKVLSGEGKSVSYLESEQDLVLPEAGFQLLQNYSEQIQKWGWICN 479
            DQHAADERIRLE+ R+K+LSGE K+ +YL++E +LVLPE G+QLL NY++Q+++WGWICN
Sbjct: 1020 DQHAADERIRLEDLRQKLLSGEAKTTAYLDAEHELVLPEIGYQLLYNYADQVKEWGWICN 1079

Query: 480  VHAQGSGSFTKNLNLLNRQTSVATLLAVPCILGVNLSNNDLLEFLDQLAETDGSSTLPPS 659
            +HAQ S SF  NLN+L++Q +V  L+AVPCILGVNLS+ DLLEFL QLA+TDGS+T+PPS
Sbjct: 1080 IHAQDSKSFRSNLNILHKQETVIMLMAVPCILGVNLSDVDLLEFLHQLADTDGSATMPPS 1139

Query: 660  VVRVLNSKACRSAIMFGDALLPSECSLIIEELKQTSLCFQCAHGRPTTVPIVNLEALRKQ 839
            V+RVLNSKACR AIMFGD+LLPSECSL++EELKQTSLCFQCAHGRPTTVP+VNLEAL KQ
Sbjct: 1140 VLRVLNSKACRGAIMFGDSLLPSECSLLVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQ 1199

Query: 840  IDNLNTWNVC-SRQPWHGLVRHRPSLERARQRL 935
            I  L       S   W+GL R   S+ER  QRL
Sbjct: 1200 IKELEIHGRSGSNGTWNGLGRQELSIERMLQRL 1232


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