BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024063
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280518.1| PREDICTED: pentatricopeptide repeat-containi...   239   6e-61
emb|CAN68786.1| hypothetical protein VITISV_024068 [Vitis vinife...   239   6e-61
ref|XP_002299976.1| predicted protein [Populus trichocarpa] gi|2...   229   7e-58
ref|XP_003589614.1| Pentatricopeptide repeat-containing protein ...   229   1e-57
ref|XP_003552899.1| PREDICTED: pentatricopeptide repeat-containi...   224   4e-56

>ref|XP_002280518.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
          Length = 248

 Score =  239 bits (611), Expect = 6e-61
 Identities = 112/130 (86%), Positives = 126/130 (96%)
 Frame = +1

Query: 4   QRQDQVFLSIKIYDVVRKEIWYRPDMFFYRDMLMMLARNKRVDEIRQVREDLRREDVLFD 183
           QRQDQVFLS+K+YDVVRKEIWYRPDM+FYRDMLMMLARNK+VDE ++V EDL+RE+VLFD
Sbjct: 100 QRQDQVFLSMKLYDVVRKEIWYRPDMYFYRDMLMMLARNKKVDETKRVWEDLKREEVLFD 159

Query: 184 QHTYGDIVRSFLDGGMPSEAMDLYEEMRCSPDPPLSLPYRVILKGLIPYPELRERVKDDF 363
           QHT+GDIVR+FLDGG+PSEAMD+YEEMR SPDPPLSLPYRVILKGL+PYPELRE+VKDDF
Sbjct: 160 QHTFGDIVRAFLDGGLPSEAMDIYEEMRRSPDPPLSLPYRVILKGLLPYPELREKVKDDF 219

Query: 364 LELFPDMIVY 393
           LELFP MIVY
Sbjct: 220 LELFPGMIVY 229


>emb|CAN68786.1| hypothetical protein VITISV_024068 [Vitis vinifera]
           gi|296083864|emb|CBI24252.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  239 bits (611), Expect = 6e-61
 Identities = 112/130 (86%), Positives = 126/130 (96%)
 Frame = +1

Query: 4   QRQDQVFLSIKIYDVVRKEIWYRPDMFFYRDMLMMLARNKRVDEIRQVREDLRREDVLFD 183
           QRQDQVFLS+K+YDVVRKEIWYRPDM+FYRDMLMMLARNK+VDE ++V EDL+RE+VLFD
Sbjct: 46  QRQDQVFLSMKLYDVVRKEIWYRPDMYFYRDMLMMLARNKKVDETKRVWEDLKREEVLFD 105

Query: 184 QHTYGDIVRSFLDGGMPSEAMDLYEEMRCSPDPPLSLPYRVILKGLIPYPELRERVKDDF 363
           QHT+GDIVR+FLDGG+PSEAMD+YEEMR SPDPPLSLPYRVILKGL+PYPELRE+VKDDF
Sbjct: 106 QHTFGDIVRAFLDGGLPSEAMDIYEEMRRSPDPPLSLPYRVILKGLLPYPELREKVKDDF 165

Query: 364 LELFPDMIVY 393
           LELFP MIVY
Sbjct: 166 LELFPGMIVY 175


>ref|XP_002299976.1| predicted protein [Populus trichocarpa] gi|222847234|gb|EEE84781.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  229 bits (585), Expect = 7e-58
 Identities = 107/130 (82%), Positives = 121/130 (93%)
 Frame = +1

Query: 4   QRQDQVFLSIKIYDVVRKEIWYRPDMFFYRDMLMMLARNKRVDEIRQVREDLRREDVLFD 183
           QRQDQVFL +K+YDVVRKEIWYRPDMF +RDMLMMLARNK+VDE  QV  DLRRE+VLFD
Sbjct: 46  QRQDQVFLCMKLYDVVRKEIWYRPDMFLFRDMLMMLARNKKVDEANQVWRDLRREEVLFD 105

Query: 184 QHTYGDIVRSFLDGGMPSEAMDLYEEMRCSPDPPLSLPYRVILKGLIPYPELRERVKDDF 363
           QHT+GDI+R+FLD G+PS+AMD+YEEMR SPDPP+SLP+RVILKGLIP+PELRE VKDDF
Sbjct: 106 QHTFGDIIRAFLDNGLPSKAMDIYEEMRQSPDPPISLPFRVILKGLIPFPELREEVKDDF 165

Query: 364 LELFPDMIVY 393
           LELFPDMIVY
Sbjct: 166 LELFPDMIVY 175


>ref|XP_003589614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478662|gb|AES59865.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 232

 Score =  229 bits (583), Expect = 1e-57
 Identities = 105/129 (81%), Positives = 122/129 (94%)
 Frame = +1

Query: 7   RQDQVFLSIKIYDVVRKEIWYRPDMFFYRDMLMMLARNKRVDEIRQVREDLRREDVLFDQ 186
           RQD VFLS+K+YD+VRKEIWYRPDMFFYRDMLMMLARNKRVDE ++V +DL+ E VLFDQ
Sbjct: 82  RQDNVFLSMKLYDIVRKEIWYRPDMFFYRDMLMMLARNKRVDETKRVWDDLKGEGVLFDQ 141

Query: 187 HTYGDIVRSFLDGGMPSEAMDLYEEMRCSPDPPLSLPYRVILKGLIPYPELRERVKDDFL 366
           HT+GDIVR++LD GMPSEAMD+YEEMR SP+PPLSLP+RVILKGLIPYPELRE++KDDFL
Sbjct: 142 HTFGDIVRAYLDSGMPSEAMDIYEEMRQSPEPPLSLPFRVILKGLIPYPELREKIKDDFL 201

Query: 367 ELFPDMIVY 393
           E+FPDMI+Y
Sbjct: 202 EVFPDMIIY 210


>ref|XP_003552899.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Glycine max]
          Length = 234

 Score =  224 bits (570), Expect = 4e-56
 Identities = 102/130 (78%), Positives = 121/130 (93%)
 Frame = +1

Query: 4   QRQDQVFLSIKIYDVVRKEIWYRPDMFFYRDMLMMLARNKRVDEIRQVREDLRREDVLFD 183
           QRQ+Q FL +K+YD+VRKEIWYRPDMFFYRDMLMMLARNKRV+E ++V  DL+ E+VLFD
Sbjct: 83  QRQNQFFLCVKLYDIVRKEIWYRPDMFFYRDMLMMLARNKRVEEAKKVWGDLKTEEVLFD 142

Query: 184 QHTYGDIVRSFLDGGMPSEAMDLYEEMRCSPDPPLSLPYRVILKGLIPYPELRERVKDDF 363
           QHT+GDI+R+FLD G+PSEAMD+YEEMR SP+PPLSLP+RVILKGLIPYPELRE+VKDDF
Sbjct: 143 QHTFGDIIRAFLDNGLPSEAMDIYEEMRQSPEPPLSLPFRVILKGLIPYPELREKVKDDF 202

Query: 364 LELFPDMIVY 393
           LE+FP MI+Y
Sbjct: 203 LEIFPGMIIY 212