BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024035
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...   120   9e-26
emb|CBI20846.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   113   1e-23
ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medi...   110   1e-22
ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   107   8e-22

>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/83 (69%), Positives = 67/83 (80%)
 Frame = -2

Query: 346 SILHGSIFGKPFEEQDLPPSLQNSGMFDIAKEWENTLDSADLVQLTRMESFYHNMLSNVK 167
           SILHGSIFGKPFEEQD+P SLQNSG FDIAKEWEN L+SAD  +L  +E FY NML+ VK
Sbjct: 482 SILHGSIFGKPFEEQDIPISLQNSGFFDIAKEWENMLESADRGKLVMLEKFYRNMLAGVK 541

Query: 166 NKLLKRRIQELINECLHSSTKGS 98
           +KL+KRRIQE+I ECL     G+
Sbjct: 542 DKLMKRRIQEIIKECLPPPATGN 564


>emb|CBI20846.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/83 (69%), Positives = 67/83 (80%)
 Frame = -2

Query: 346 SILHGSIFGKPFEEQDLPPSLQNSGMFDIAKEWENTLDSADLVQLTRMESFYHNMLSNVK 167
           SILHGSIFGKPFEEQD+P SLQNSG FDIAKEWEN L+SAD  +L  +E FY NML+ VK
Sbjct: 359 SILHGSIFGKPFEEQDIPISLQNSGFFDIAKEWENMLESADRGKLVMLEKFYRNMLAGVK 418

Query: 166 NKLLKRRIQELINECLHSSTKGS 98
           +KL+KRRIQE+I ECL     G+
Sbjct: 419 DKLMKRRIQEIIKECLPPPATGN 441


>ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 559

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/79 (65%), Positives = 68/79 (86%)
 Frame = -2

Query: 346 SILHGSIFGKPFEEQDLPPSLQNSGMFDIAKEWENTLDSADLVQLTRMESFYHNMLSNVK 167
           SILHGSIFGKPF+EQD+P SL+NSG FDIAKEWE+ L++AD  +L R+E FY +ML+ VK
Sbjct: 477 SILHGSIFGKPFDEQDIPVSLRNSGSFDIAKEWESMLEAADQRKLIRLEMFYRDMLTGVK 536

Query: 166 NKLLKRRIQELINECLHSS 110
           ++L+KRRI+E++ ECL SS
Sbjct: 537 DELMKRRIKEIVQECLQSS 555


>ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
           gi|355492663|gb|AES73866.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
          Length = 563

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/79 (67%), Positives = 64/79 (81%)
 Frame = -2

Query: 346 SILHGSIFGKPFEEQDLPPSLQNSGMFDIAKEWENTLDSADLVQLTRMESFYHNMLSNVK 167
           SILHGSIFGKPF EQD+P SL NSG  DIAKEWEN L++AD  +L  ME FY +ML+ VK
Sbjct: 481 SILHGSIFGKPFNEQDIPVSLGNSGSMDIAKEWENMLEAADDRKLVTMEMFYRDMLTGVK 540

Query: 166 NKLLKRRIQELINECLHSS 110
           +KL+KR+I+E+I ECL SS
Sbjct: 541 DKLMKRKIKEIIKECLESS 559


>ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 581

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/80 (61%), Positives = 66/80 (82%)
 Frame = -2

Query: 346 SILHGSIFGKPFEEQDLPPSLQNSGMFDIAKEWENTLDSADLVQLTRMESFYHNMLSNVK 167
           S LHGSIFGKPF+E D+P SL+NSG FDIAKEWE+ L+S+D   L R+E+ Y NML+++K
Sbjct: 499 SFLHGSIFGKPFQEGDIPLSLRNSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIK 558

Query: 166 NKLLKRRIQELINECLHSST 107
           +K+LK+R+QEL+ E L S+T
Sbjct: 559 DKILKKRVQELVKEFLQSAT 578