BLASTX nr result

ID: Coptis24_contig00024028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024028
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group] g...   178   4e-43
gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indi...   176   2e-42
ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloro...   163   2e-38
ref|XP_002437117.1| hypothetical protein SORBIDRAFT_10g021300 [S...   162   3e-38
gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hy...   157   7e-37

>ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group]
           gi|53793078|dbj|BAD54288.1| putative arogenate
           dehydrogenase isoform 2 [Oryza sativa Japonica Group]
           gi|113595847|dbj|BAF19721.1| Os06g0542200 [Oryza sativa
           Japonica Group] gi|215765048|dbj|BAG86745.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222635711|gb|EEE65843.1| hypothetical protein
           OsJ_21611 [Oryza sativa Japonica Group]
          Length = 342

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/121 (71%), Positives = 101/121 (83%)
 Frame = +1

Query: 1   KCEQFLSIFQDEGCQMVEMTCEEHDRYAAESQFITHMVARILSNMNLESTPINTKNYETL 180
           KCEQFLSIF+ EGC+MVEM CEEHDRYAA SQFITH + RILS +NLESTPINTK YETL
Sbjct: 221 KCEQFLSIFEREGCRMVEMLCEEHDRYAAGSQFITHTIGRILSQLNLESTPINTKGYETL 280

Query: 181 MELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKLRSTLRTQIEEKVT 360
           ++LT  T+S S DL+ GLF+YN+NA EQI+ LDRAFE VKQ L+G+L + LR QIEE+V 
Sbjct: 281 LQLTKNTISDSFDLYYGLFMYNVNATEQIDNLDRAFEKVKQMLYGRLHNVLRKQIEERVP 340

Query: 361 I 363
           I
Sbjct: 341 I 341


>gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indica Group]
          Length = 342

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/121 (70%), Positives = 100/121 (82%)
 Frame = +1

Query: 1   KCEQFLSIFQDEGCQMVEMTCEEHDRYAAESQFITHMVARILSNMNLESTPINTKNYETL 180
           KCEQFLSIF+ EGC+MVEM CEEHDRYAA SQFITH + RILS +NLESTPINTK YETL
Sbjct: 221 KCEQFLSIFEREGCRMVEMLCEEHDRYAAGSQFITHTIGRILSQLNLESTPINTKGYETL 280

Query: 181 MELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKLRSTLRTQIEEKVT 360
           ++LT  T+S S DL+ GLF+YN+NA EQI+ LDRAFE VKQ L+G+L + LR QI E+V 
Sbjct: 281 LQLTKNTISDSFDLYYGLFMYNVNATEQIDNLDRAFEKVKQMLYGRLHNVLRKQIVERVP 340

Query: 361 I 363
           I
Sbjct: 341 I 341


>ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 361

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/120 (65%), Positives = 97/120 (80%)
 Frame = +1

Query: 4   CEQFLSIFQDEGCQMVEMTCEEHDRYAAESQFITHMVARILSNMNLESTPINTKNYETLM 183
           C QFLSIF+ EGC+MVEM+C EHDR+AA SQFITH + R+L+ +NL+STPINTK +E L+
Sbjct: 242 CGQFLSIFEGEGCRMVEMSCAEHDRHAAASQFITHTIGRVLAQLNLKSTPINTKGFEALL 301

Query: 184 ELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKLRSTLRTQIEEKVTI 363
           +LT  TVS S DL+ GLF+YN+NA EQIEKL+RAFE VKQ L+G+L   LR QI E+V I
Sbjct: 302 KLTENTVSDSFDLYYGLFMYNVNATEQIEKLERAFEKVKQMLYGRLHDILRKQIVERVPI 361


>ref|XP_002437117.1| hypothetical protein SORBIDRAFT_10g021300 [Sorghum bicolor]
           gi|241915340|gb|EER88484.1| hypothetical protein
           SORBIDRAFT_10g021300 [Sorghum bicolor]
          Length = 382

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/118 (64%), Positives = 96/118 (81%)
 Frame = +1

Query: 1   KCEQFLSIFQDEGCQMVEMTCEEHDRYAAESQFITHMVARILSNMNLESTPINTKNYETL 180
           KC+QFLSIF+ EGC+MVEM+C EHDRYAA SQFITH + R+LS +NL+STPINTK YETL
Sbjct: 240 KCDQFLSIFEQEGCRMVEMSCAEHDRYAAGSQFITHTIGRVLSQLNLKSTPINTKGYETL 299

Query: 181 MELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKLRSTLRTQIEEK 354
           ++LT  TVS S DL+ GLF+YN+NA EQ++KL+ AFE V+Q L G+L   +R QI E+
Sbjct: 300 LQLTKNTVSDSFDLYYGLFMYNVNATEQLDKLEMAFEKVRQMLSGRLHDFIRKQIVER 357


>gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hypothetical protein
           ZEAMMB73_026457 [Zea mays]
          Length = 392

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/117 (62%), Positives = 94/117 (80%)
 Frame = +1

Query: 4   CEQFLSIFQDEGCQMVEMTCEEHDRYAAESQFITHMVARILSNMNLESTPINTKNYETLM 183
           C++FLSIF+ EGC+MVEM+C EHDRYAA SQFITH + R+LS +NL STPINTK YETL+
Sbjct: 234 CDRFLSIFEQEGCRMVEMSCAEHDRYAAGSQFITHTIGRVLSQLNLSSTPINTKGYETLL 293

Query: 184 ELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKLRSTLRTQIEEK 354
           +LT  TVS S DL+ GLF+YN+NA EQ+++L+ AFE V+Q L G+L   +R QI E+
Sbjct: 294 QLTQNTVSDSFDLYYGLFMYNINATEQLDRLEMAFEKVRQMLSGRLHDFIRKQIVER 350


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