BLASTX nr result

ID: Coptis24_contig00024024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024024
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34946.3| unnamed protein product [Vitis vinifera]              513   e-143
ref|XP_002274835.1| PREDICTED: nodulation receptor kinase-like [...   511   e-142
emb|CAN80789.1| hypothetical protein VITISV_020546 [Vitis vinifera]   495   e-137
ref|XP_002264586.2| PREDICTED: nodulation receptor kinase-like [...   491   e-136
ref|XP_002517357.1| serine-threonine protein kinase, plant-type,...   479   e-133

>emb|CBI34946.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  513 bits (1320), Expect = e-143
 Identities = 263/415 (63%), Positives = 313/415 (75%), Gaps = 15/415 (3%)
 Frame = +3

Query: 3    CRFAVLVSLTSNMIQDENWITTLLGCLGDQ--------------SAGIQVEGRSKRK-KI 137
            CRFAVLVSL S+  +DE+W   +  CL +Q              S+G     RS  K KI
Sbjct: 177  CRFAVLVSLISSRTEDESWFGKIYTCLREQDIDKGHFHFQSNTRSSGRDETSRSHTKFKI 236

Query: 138  NKGLWLLVGGHTAITIMVGVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLDCQEIPIK 317
            + GLW L+GG  A+ +++ +                 +  L   ++  P+   C +I IK
Sbjct: 237  STGLWFLIGGLIAMALIITIGIWFLLRRWCKSYAIPKRAAL---KAVAPEGPGCMKISIK 293

Query: 318  EIFAATNNLNAMNFIGQGIAGKVYKGVLANGQPVAVKHIINDGHMETFVREVTSLSHVRH 497
            E+++ATNNLN  N IG+G AGKVY+G+L N Q VAVKHIIND HMETFVRE+TSLSH++H
Sbjct: 294  EVYSATNNLNEKNIIGEGTAGKVYRGILQNNQHVAVKHIINDNHMETFVREITSLSHIKH 353

Query: 498  TNLVSLLGYCEEEDECYLVYELCPNGNLSEWLFGKEQVLSWIQRLEIAIDSARGLWFLHT 677
             NLV+LLGYCE EDEC+LVYELCP+GNLSEWLFGK++VLSWIQRLEIAIDSA+GL FLHT
Sbjct: 354  PNLVALLGYCEVEDECFLVYELCPDGNLSEWLFGKDKVLSWIQRLEIAIDSAQGLLFLHT 413

Query: 678  YPEGCIVHRDIKPTNILLGKRFEAKLSDFGLSKVIDLGQSYVSSEVRGTFGYVDPEYQRN 857
            YP GCIVHRDIKPTNILLG  FEAKLSDFGLSKVID G+S+VSSEVRGTFGY+DPEYQ N
Sbjct: 414  YPAGCIVHRDIKPTNILLGANFEAKLSDFGLSKVIDQGESHVSSEVRGTFGYMDPEYQSN 473

Query: 858  HRVNSYGDVYSFGIVLLQLISGKRVINLNLKKPMPIGKMAKLLTRGGSISEFADPKMNGE 1037
            H VN  GDVYSFGIVLLQ++SGK+VINLNLKKPM + KMAK+LT+ GSI+EF DPK++GE
Sbjct: 474  HHVNPSGDVYSFGIVLLQILSGKKVINLNLKKPMSLDKMAKILTKDGSITEFVDPKLDGE 533

Query: 1038 YSTEAFDLILELALSCTALKQQRPRMEQVLKALEIALNISTKEKARSPTDTLTRV 1202
            YS EAFDLIL+LALSCT+LKQQRP MEQV+  LE AL IST  KA +P  T  R+
Sbjct: 534  YSAEAFDLILKLALSCTSLKQQRPSMEQVVLRLEKALEISTMAKACTPQLTPNRL 588


>ref|XP_002274835.1| PREDICTED: nodulation receptor kinase-like [Vitis vinifera]
          Length = 594

 Score =  511 bits (1317), Expect = e-142
 Identities = 258/400 (64%), Positives = 307/400 (76%)
 Frame = +3

Query: 3    CRFAVLVSLTSNMIQDENWITTLLGCLGDQSAGIQVEGRSKRKKINKGLWLLVGGHTAIT 182
            CRFAVLVSL S+  +DE+W   +  CL +Q              I+KGLW L+GG  A+ 
Sbjct: 189  CRFAVLVSLISSRTEDESWFGKIYTCLREQD-------------IDKGLWFLIGGLIAMA 235

Query: 183  IMVGVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLDCQEIPIKEIFAATNNLNAMNFI 362
            +++ +                 +  L   ++  P+   C +I IKE+++ATNNLN  N I
Sbjct: 236  LIITIGIWFLLRRWCKSYAIPKRAAL---KAVAPEGPGCMKISIKEVYSATNNLNEKNII 292

Query: 363  GQGIAGKVYKGVLANGQPVAVKHIINDGHMETFVREVTSLSHVRHTNLVSLLGYCEEEDE 542
            G+G AGKVY+G+L N Q VAVKHIIND HMETFVRE+TSLSH++H NLV+LLGYCE EDE
Sbjct: 293  GEGTAGKVYRGILQNNQHVAVKHIINDNHMETFVREITSLSHIKHPNLVALLGYCEVEDE 352

Query: 543  CYLVYELCPNGNLSEWLFGKEQVLSWIQRLEIAIDSARGLWFLHTYPEGCIVHRDIKPTN 722
            C+LVYELCP+GNLSEWLFGK++VLSWIQRLEIAIDSA+GL FLHTYP GCIVHRDIKPTN
Sbjct: 353  CFLVYELCPDGNLSEWLFGKDKVLSWIQRLEIAIDSAQGLLFLHTYPAGCIVHRDIKPTN 412

Query: 723  ILLGKRFEAKLSDFGLSKVIDLGQSYVSSEVRGTFGYVDPEYQRNHRVNSYGDVYSFGIV 902
            ILLG  FEAKLSDFGLSKVID G+S+VSSEVRGTFGY+DPEYQ NH VN  GDVYSFGIV
Sbjct: 413  ILLGANFEAKLSDFGLSKVIDQGESHVSSEVRGTFGYMDPEYQSNHHVNPSGDVYSFGIV 472

Query: 903  LLQLISGKRVINLNLKKPMPIGKMAKLLTRGGSISEFADPKMNGEYSTEAFDLILELALS 1082
            LLQ++SGK+VINLNLKKPM + KMAK+LT+ GSI+EF DPK++GEYS EAFDLIL+LALS
Sbjct: 473  LLQILSGKKVINLNLKKPMSLDKMAKILTKDGSITEFVDPKLDGEYSAEAFDLILKLALS 532

Query: 1083 CTALKQQRPRMEQVLKALEIALNISTKEKARSPTDTLTRV 1202
            CT+LKQQRP MEQV+  LE AL IST  KA +P  T  R+
Sbjct: 533  CTSLKQQRPSMEQVVLRLEKALEISTMAKACTPQLTPNRL 572


>emb|CAN80789.1| hypothetical protein VITISV_020546 [Vitis vinifera]
          Length = 623

 Score =  495 bits (1274), Expect = e-137
 Identities = 258/416 (62%), Positives = 309/416 (74%), Gaps = 16/416 (3%)
 Frame = +3

Query: 3    CRFAVLVSLTSNMIQDENWITTLLGCLGDQ--------------SAGIQVEGRSKRK-KI 137
            CRFAVLVSL S+  +DE+W   +  CL +Q              S+G     RS  K KI
Sbjct: 189  CRFAVLVSLISSRTEDESWFGKIYTCLREQDIDKGHFHFQSNTRSSGRDETSRSHTKFKI 248

Query: 138  NKGLWLLVGGHTAITIMVGVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLDCQEIPIK 317
            + GLW L+GG  A+ +++ +                 +  L   ++  P+   C +I IK
Sbjct: 249  STGLWFLIGGLIAMALIITIGIWFLLRRWCKSYAIPKRAAL---KAVAPEGPGCMKISIK 305

Query: 318  EIFAATNNLNAMNFIGQGIAGKVYKGVLANGQPVAVKHIINDGHMETFVREVTSLSHVRH 497
            E+++ATNNLN  N IG+G AGKVY+G+L N Q VAVKHIIND HMETFVRE+ SLS ++H
Sbjct: 306  EVYSATNNLNEKNIIGEGTAGKVYRGILQNNQHVAVKHIINDNHMETFVREIXSLSXIKH 365

Query: 498  TNLVSLLGYCEEEDECYLVYELCPNGNLSEWLFGKEQVLSWIQRLEIAIDSARGLWFLHT 677
             NLV+LLGYCE EDEC+LVYELCP+GNLSEWLFGK++VLSWIQRLEIAIDSA+GL FLHT
Sbjct: 366  PNLVALLGYCEVEDECFLVYELCPBGNLSEWLFGKDKVLSWIQRLEIAIDSAQGLLFLHT 425

Query: 678  YPEGCIVHRDIKPTNILLGKRFEAKLSDFGLSKVIDLGQSYVSSEVRGTFGYVDPEYQRN 857
            YP GCIVHRDIKPTNILLG  FEAKLSDFGLSKVID G+S+VSSEVRGTFGY+DPEYQ N
Sbjct: 426  YPAGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDQGESHVSSEVRGTFGYMDPEYQSN 485

Query: 858  HRVNSYGDVYSFGIVLLQLISGKRVINLNLKKPMPIG-KMAKLLTRGGSISEFADPKMNG 1034
            H VNS GDVYSFGIVLLQ++SGK+VINLNL +   +  KMAK+LT+ GSI+EF DPK++G
Sbjct: 486  HHVNSSGDVYSFGIVLLQILSGKKVINLNLGRNRCLSDKMAKILTKDGSITEFVDPKLDG 545

Query: 1035 EYSTEAFDLILELALSCTALKQQRPRMEQVLKALEIALNISTKEKARSPTDTLTRV 1202
            EYS EAFDLIL+LALSCT+LKQQRP MEQV+  LE AL IST  KA +P  T  R+
Sbjct: 546  EYSAEAFDLILKLALSCTSLKQQRPSMEQVVLRLEKALXISTMAKACTPQLTPNRL 601


>ref|XP_002264586.2| PREDICTED: nodulation receptor kinase-like [Vitis vinifera]
          Length = 595

 Score =  491 bits (1265), Expect = e-136
 Identities = 250/411 (60%), Positives = 304/411 (73%), Gaps = 15/411 (3%)
 Frame = +3

Query: 3    CRFAVLVSLTSNMIQDENWITTLLGCLGDQSAGIQVEGRSKRKKINKG------------ 146
            CRF+VLVSL S  I ++ W+  +  CL  QS  + +    K+  I KG            
Sbjct: 184  CRFSVLVSLISKRIGEKKWVQEVCRCLRKQSTPMAMGSVEKKPNIRKGEPSLLSPINNIS 243

Query: 147  ---LWLLVGGHTAITIMVGVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLDCQEIPIK 317
               L+ ++GG   I ++V +A                KD     + S  +   C  I IK
Sbjct: 244  ITGLYFVIGGLMGIAVIVLIASWILCSRRHKDDYPKGKDA---SDDSESEEFRCLNISIK 300

Query: 318  EIFAATNNLNAMNFIGQGIAGKVYKGVLANGQPVAVKHIINDGHMETFVREVTSLSHVRH 497
            EI++ATNNL+A NFIGQGIAGKVY+G+L+NGQ +AVKHI ++  +ETF+REVTSLSHVRH
Sbjct: 301  EIYSATNNLSASNFIGQGIAGKVYRGMLSNGQHIAVKHIFDNECVETFIREVTSLSHVRH 360

Query: 498  TNLVSLLGYCEEEDECYLVYELCPNGNLSEWLFGKEQVLSWIQRLEIAIDSARGLWFLHT 677
             NLV+LLGYCE+E+EC+LVYELC NGNLSEWL+GK++VLSWI RLEIAID ARGLWFLHT
Sbjct: 361  PNLVTLLGYCEKEEECFLVYELCHNGNLSEWLYGKDKVLSWILRLEIAIDCARGLWFLHT 420

Query: 678  YPEGCIVHRDIKPTNILLGKRFEAKLSDFGLSKVIDLGQSYVSSEVRGTFGYVDPEYQRN 857
            YPEGCIVHRDIKPTNIL+   F AKLSDFGLSKV+DL QSYVSSEVRGTFGYVDPEYQ N
Sbjct: 421  YPEGCIVHRDIKPTNILISANFHAKLSDFGLSKVMDLDQSYVSSEVRGTFGYVDPEYQIN 480

Query: 858  HRVNSYGDVYSFGIVLLQLISGKRVINLNLKKPMPIGKMAKLLTRGGSISEFADPKMNGE 1037
            H VNS GD+YSFGIVLLQ++SGKRV+NLN KKPMP+ KMA+ L +G +ISEFADPK+NGE
Sbjct: 481  HHVNSSGDIYSFGIVLLQILSGKRVLNLNSKKPMPLDKMARFLMKGRNISEFADPKLNGE 540

Query: 1038 YSTEAFDLILELALSCTALKQQRPRMEQVLKALEIALNISTKEKARSPTDT 1190
            YS EAF+LILELAL+CT LK+ RP +EQV+  LE AL+IS + +  +P  T
Sbjct: 541  YSVEAFELILELALTCTGLKKHRPSIEQVVIILEKALDISRRVELTAPHST 591


>ref|XP_002517357.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223543368|gb|EEF44899.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 605

 Score =  479 bits (1233), Expect = e-133
 Identities = 252/416 (60%), Positives = 306/416 (73%), Gaps = 17/416 (4%)
 Frame = +3

Query: 3    CRFAVLVSLTSNMIQDENWITTLLGCLGDQ-----SAGIQVEGRSKRKKIN--------- 140
            CRFAVLV+LTS  I D ++I  +  CL +Q     SA   V+ + K    +         
Sbjct: 188  CRFAVLVALTSTRIDDNSYINRVYRCLANQNNDTESAETAVKSKPKISTGDSLQPLMISI 247

Query: 141  --KGLWLLVGGHTAITIMV-GVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLDCQEIP 311
              +G+W+L+G   A T M+  +A                K+     ++   +N  C + P
Sbjct: 248  RLQGIWILIGCLFAATAMIITIAANIVSRRRLKSKVPLEKNAF---KNLQLENSRCPKFP 304

Query: 312  IKEIFAATNNLNAMNFIGQGIAGKVYKGVLANGQPVAVKHIINDGHMETFVREVTSLSHV 491
            ++E++ ATNNL+  N IG+G AGKVYKGVL+N Q VA+KHIINDG+ ET VREVTSLSHV
Sbjct: 305  LREVYLATNNLSDENLIGEGTAGKVYKGVLSNSQHVAIKHIINDGNRETVVREVTSLSHV 364

Query: 492  RHTNLVSLLGYCEEEDECYLVYELCPNGNLSEWLFGKEQVLSWIQRLEIAIDSARGLWFL 671
            RH NLV+LLG C  EDEC+++YELCPNGNLS+W+FGK+++LSWIQRL+IAIDSAR L FL
Sbjct: 365  RHPNLVALLGCCIREDECFILYELCPNGNLSQWIFGKDKILSWIQRLQIAIDSARALCFL 424

Query: 672  HTYPEGCIVHRDIKPTNILLGKRFEAKLSDFGLSKVIDLGQSYVSSEVRGTFGYVDPEYQ 851
            HTY EGCIVHRDIKPTNILLG+ FEAKLSDFGLSKVI  G++Y SSEVRGTFGYVDPEYQ
Sbjct: 425  HTYSEGCIVHRDIKPTNILLGQNFEAKLSDFGLSKVISQGETYASSEVRGTFGYVDPEYQ 484

Query: 852  RNHRVNSYGDVYSFGIVLLQLISGKRVINLNLKKPMPIGKMAKLLTRGGSISEFADPKMN 1031
             N +VNS GDVYSFGIVLLQ++SGK+VIN+NLKKPMPI KMAK LTRGGSI EFADPK++
Sbjct: 485  SNRQVNSSGDVYSFGIVLLQILSGKKVINMNLKKPMPIDKMAKALTRGGSIIEFADPKLD 544

Query: 1032 GEYSTEAFDLILELALSCTALKQQRPRMEQVLKALEIALNISTKEKARSPTDTLTR 1199
            GEYS EAF LI +LALSCTALKQ RP MEQV+  LE AL +ST+ +A +P  T  R
Sbjct: 545  GEYSAEAFVLIFKLALSCTALKQLRPSMEQVVIKLEEALVVSTRARASTPETTPNR 600


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