BLASTX nr result

ID: Coptis24_contig00024023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00024023
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632010.1| PREDICTED: uncharacterized protein LOC100245...   204   4e-50
ref|XP_002528335.1| Vesicle transport protein SEC20, putative [R...   204   4e-50
ref|XP_003594439.1| hypothetical protein MTR_2g028660 [Medicago ...   199   1e-48
ref|NP_001239735.1| uncharacterized protein LOC100795925 [Glycin...   198   3e-48
ref|XP_003535033.1| PREDICTED: uncharacterized protein LOC100812...   193   9e-47

>ref|XP_003632010.1| PREDICTED: uncharacterized protein LOC100245990 [Vitis vinifera]
           gi|296083741|emb|CBI23730.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  204 bits (519), Expect = 4e-50
 Identities = 117/217 (53%), Positives = 138/217 (63%)
 Frame = +2

Query: 2   EEYGKGTEEEGNSLQRLNGLAQDGXXXXXXXXXXXXXXXPQMPTQEDVQSAXXXXXXXXX 181
           E+YGK ++++ NSL RLNGLAQDG               PQ+PT ED+QSA         
Sbjct: 30  EDYGKSSDQK-NSLPRLNGLAQDGLALLSSLQFNLDLLAPQLPTDEDIQSANTT------ 82

Query: 182 XXXXXXXXXXXXXXXXLLFKSWKDQYQSLHLGLRNANLQAKANIRKAAQAEREXXXXXXX 361
                              +SWK+Q QSL   LRNANLQAKAN+RKAA+ ERE       
Sbjct: 83  ------------------LQSWKNQIQSLRSSLRNANLQAKANMRKAAKEERELLLGAGG 124

Query: 362 ESTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQEVERSSSMLTTFDESTGVLKKAESE 541
           ESTIRRRNLQTK GMTSAAE+IT+SLRRTRQLMVQEVER+++ML T +ESTGVLKKAESE
Sbjct: 125 ESTIRRRNLQTKTGMTSAAENITESLRRTRQLMVQEVERNTTMLLTNEESTGVLKKAESE 184

Query: 542 YKGHXXXXXXXXXXXXXXXXQDVLDRLIIVAGFLFFS 652
           YKGH                QDVLDR+I++ GF+FFS
Sbjct: 185 YKGHRSLLMRTRNLLTTMQRQDVLDRIILIVGFVFFS 221


>ref|XP_002528335.1| Vesicle transport protein SEC20, putative [Ricinus communis]
           gi|223532203|gb|EEF34007.1| Vesicle transport protein
           SEC20, putative [Ricinus communis]
          Length = 299

 Score =  204 bits (519), Expect = 4e-50
 Identities = 122/226 (53%), Positives = 135/226 (59%), Gaps = 9/226 (3%)
 Frame = +2

Query: 2   EEYGKGT---------EEEGNSLQRLNGLAQDGXXXXXXXXXXXXXXXPQMPTQEDVQSA 154
           E YGK T         EE  NSL RLNGLAQDG               PQ+PT EDV SA
Sbjct: 30  EGYGKSTRLNGGVASQEETVNSLPRLNGLAQDGLAVLKSLQFKLDLLAPQLPTHEDVNSA 89

Query: 155 XXXXXXXXXXXXXXXXXXXXXXXXXLLFKSWKDQYQSLHLGLRNANLQAKANIRKAAQAE 334
                                     L +SWK Q+Q+L L LRNANLQAKAN+RKAAQ +
Sbjct: 90  QS------------------------LLESWKTQFQNLRLSLRNANLQAKANMRKAAQEQ 125

Query: 335 REXXXXXXXESTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQEVERSSSMLTTFDEST 514
           RE       ESTIRRRNLQTKAGMTSAAESIT+SLRR+RQLMVQEVERS+S L TF+EST
Sbjct: 126 RELLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRSRQLMVQEVERSASSLVTFEEST 185

Query: 515 GVLKKAESEYKGHXXXXXXXXXXXXXXXXQDVLDRLIIVAGFLFFS 652
           GVL+KAESEYKGH                QDVLDR+I+  GF  FS
Sbjct: 186 GVLRKAESEYKGHRSLLTRTRNLLSTMQRQDVLDRMILAVGFFLFS 231


>ref|XP_003594439.1| hypothetical protein MTR_2g028660 [Medicago truncatula]
           gi|355483487|gb|AES64690.1| hypothetical protein
           MTR_2g028660 [Medicago truncatula]
          Length = 292

 Score =  199 bits (507), Expect = 1e-48
 Identities = 116/218 (53%), Positives = 135/218 (61%), Gaps = 2/218 (0%)
 Frame = +2

Query: 5   EYGKG--TEEEGNSLQRLNGLAQDGXXXXXXXXXXXXXXXPQMPTQEDVQSAXXXXXXXX 178
           EYGK   +++E NSL RLNG+AQDG               PQ+PTQ++V SA        
Sbjct: 31  EYGKSGRSKDEKNSLARLNGIAQDGLALLSSLHFNLDLLAPQLPTQQEVDSARQ------ 84

Query: 179 XXXXXXXXXXXXXXXXXLLFKSWKDQYQSLHLGLRNANLQAKANIRKAAQAEREXXXXXX 358
                             L +SWK   Q+L + LRNANLQAKAN+RKAAQ ERE      
Sbjct: 85  ------------------LLQSWKTLTQNLRISLRNANLQAKANLRKAAQEERELLLGGG 126

Query: 359 XESTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQEVERSSSMLTTFDESTGVLKKAES 538
            EST+RRRNLQTKAGMTSAAESIT+SLRRTRQLMVQEVER++S L T DESTGVLKKAES
Sbjct: 127 EESTVRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAES 186

Query: 539 EYKGHXXXXXXXXXXXXXXXXQDVLDRLIIVAGFLFFS 652
           EYKGH                QD++DR+I+  GFL FS
Sbjct: 187 EYKGHRSLLTRTRNLLSTMQRQDIIDRVILGVGFLLFS 224


>ref|NP_001239735.1| uncharacterized protein LOC100795925 [Glycine max]
           gi|255645756|gb|ACU23371.1| unknown [Glycine max]
          Length = 292

 Score =  198 bits (503), Expect = 3e-48
 Identities = 118/218 (54%), Positives = 133/218 (61%), Gaps = 2/218 (0%)
 Frame = +2

Query: 5   EYGKG--TEEEGNSLQRLNGLAQDGXXXXXXXXXXXXXXXPQMPTQEDVQSAXXXXXXXX 178
           EYGK    +EE NSL RLNG+AQDG               PQ+P++ +VQS         
Sbjct: 31  EYGKPGRAKEEKNSLARLNGIAQDGLALLSSFLFTLDLLAPQLPSEPEVQSTRA------ 84

Query: 179 XXXXXXXXXXXXXXXXXLLFKSWKDQYQSLHLGLRNANLQAKANIRKAAQAEREXXXXXX 358
                             L +SWK   Q+L L LRNANLQAKAN+RKAAQ ERE      
Sbjct: 85  ------------------LLQSWKTLTQNLRLNLRNANLQAKANLRKAAQEERELLLGGG 126

Query: 359 XESTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQEVERSSSMLTTFDESTGVLKKAES 538
            EST+RRRNLQTKAGMTSAAESIT+SLRRTRQLMVQEVER++S L T DESTGVLKKAES
Sbjct: 127 EESTVRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAES 186

Query: 539 EYKGHXXXXXXXXXXXXXXXXQDVLDRLIIVAGFLFFS 652
           EYKGH                QDV+DR+II  GFL FS
Sbjct: 187 EYKGHRSLLMRTRNLLSTMQRQDVIDRVIIGVGFLLFS 224


>ref|XP_003535033.1| PREDICTED: uncharacterized protein LOC100812474 [Glycine max]
          Length = 293

 Score =  193 bits (490), Expect = 9e-47
 Identities = 116/218 (53%), Positives = 132/218 (60%), Gaps = 2/218 (0%)
 Frame = +2

Query: 5   EYGKGT--EEEGNSLQRLNGLAQDGXXXXXXXXXXXXXXXPQMPTQEDVQSAXXXXXXXX 178
           +YGK    +EE NSL RLNG+AQDG               PQ+P++ +VQS         
Sbjct: 31  DYGKSARAKEENNSLARLNGIAQDGLALLSSFLFTLDLLAPQLPSEPEVQSTRA------ 84

Query: 179 XXXXXXXXXXXXXXXXXLLFKSWKDQYQSLHLGLRNANLQAKANIRKAAQAEREXXXXXX 358
                             L +S K   Q+L L LRNANLQAKAN+RKAAQ ERE      
Sbjct: 85  ------------------LLQSSKTLTQNLRLNLRNANLQAKANLRKAAQEERELLLGGG 126

Query: 359 XESTIRRRNLQTKAGMTSAAESITDSLRRTRQLMVQEVERSSSMLTTFDESTGVLKKAES 538
            EST+RRRNLQTKAGMTSAAESIT+SLRRTRQLMVQEVER++S L T DESTGVLKKAES
Sbjct: 127 EESTVRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERNTSTLMTLDESTGVLKKAES 186

Query: 539 EYKGHXXXXXXXXXXXXXXXXQDVLDRLIIVAGFLFFS 652
           EYKGH                QDV+DR+II  GFL FS
Sbjct: 187 EYKGHRSLLMRTRNLLSTMQRQDVIDRVIIGVGFLLFS 224


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