BLASTX nr result
ID: Coptis24_contig00024011
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00024011
(801 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282255.1| PREDICTED: uncharacterized protein LOC100258... 142 7e-32
ref|XP_002313856.1| predicted protein [Populus trichocarpa] gi|2... 142 1e-31
ref|XP_003607957.1| Protein thiJ [Medicago truncatula] gi|355509... 139 6e-31
gb|AFK38256.1| unknown [Lotus japonicus] 133 4e-29
ref|XP_002518756.1| conserved hypothetical protein [Ricinus comm... 133 5e-29
>ref|XP_002282255.1| PREDICTED: uncharacterized protein LOC100258951 [Vitis vinifera]
gi|297741268|emb|CBI32399.3| unnamed protein product
[Vitis vinifera]
Length = 447
Score = 142 bits (359), Expect = 7e-32
Identities = 73/112 (65%), Positives = 86/112 (76%)
Frame = -2
Query: 800 GGERXXXXXXXXXXXKEQEVAGRIFGAICSSPAVLHKQGLLKDRRATGHPSIISKVTSHA 621
G ER KEQ AGRI+GAICSSP VLH+QGLLK +RAT HPS+ SK+T+
Sbjct: 336 GAERLHKSKVLKKMLKEQGSAGRIYGAICSSPTVLHRQGLLKGKRATAHPSVASKLTNEV 395
Query: 620 GNGADVVIDGKIITSKGLATAADFALTIVSKMYGHARARSVAEGLVFQYPQS 465
GA VVIDGK+ITS+GLATA +FAL IVSK++ HARARSVAEGLVF+YP+S
Sbjct: 396 VEGARVVIDGKLITSRGLATAIEFALAIVSKLFSHARARSVAEGLVFEYPKS 447
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/87 (34%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = -2
Query: 734 RIFGAICSSPAV-LHKQGLLKDRRATGHPSIISKVTSHAGNGADVVIDGKIITSKGLATA 558
R++GAIC++PA+ L GLL+ ++ T HP+ + K+ + +++ + G++ TS+G TA
Sbjct: 155 RLYGAICAAPAITLQPWGLLRRKQMTCHPAFMDKLPTFRAVKSNLQVSGELTTSRGPGTA 214
Query: 557 ADFALTIVSKMYGHARARSVAEGLVFQ 477
+FAL +V +++G + A+ V E L+ +
Sbjct: 215 FEFALALVDQLFGESVAKEVGELLLMR 241
>ref|XP_002313856.1| predicted protein [Populus trichocarpa] gi|222850264|gb|EEE87811.1|
predicted protein [Populus trichocarpa]
Length = 374
Score = 142 bits (357), Expect = 1e-31
Identities = 70/112 (62%), Positives = 86/112 (76%)
Frame = -2
Query: 800 GGERXXXXXXXXXXXKEQEVAGRIFGAICSSPAVLHKQGLLKDRRATGHPSIISKVTSHA 621
G ER +EQ AGRI+GA+CSSPAVLH+QGLLKD+RAT HPS+++ + ++
Sbjct: 264 GAERLHKSKVLKKLLQEQYTAGRIYGAVCSSPAVLHRQGLLKDKRATAHPSVVTNL-NNV 322
Query: 620 GNGADVVIDGKIITSKGLATAADFALTIVSKMYGHARARSVAEGLVFQYPQS 465
NGA VVIDGK+ITSKGL+T DFAL IVSK++GHAR R VAEGLVF YP+S
Sbjct: 323 SNGAKVVIDGKLITSKGLSTVTDFALAIVSKLFGHARTRCVAEGLVFDYPRS 374
Score = 65.9 bits (159), Expect = 1e-08
Identities = 30/87 (34%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = -2
Query: 734 RIFGAICSSPAV-LHKQGLLKDRRATGHPSIISKVTSHAGNGADVVIDGKIITSKGLATA 558
R++GAIC++PA+ L GLL+ ++ TGHP+ + K+ + + + + G++ TS+G T+
Sbjct: 83 RLYGAICAAPAITLLPWGLLRRKQMTGHPAFMDKLPTFWAVASKIQVSGELTTSRGPGTS 142
Query: 557 ADFALTIVSKMYGHARARSVAEGLVFQ 477
+FAL++V +++G + A+ V + L+ Q
Sbjct: 143 FEFALSLVDQLFGESVAKEVGQLLLMQ 169
>ref|XP_003607957.1| Protein thiJ [Medicago truncatula] gi|355509012|gb|AES90154.1|
Protein thiJ [Medicago truncatula]
Length = 451
Score = 139 bits (351), Expect = 6e-31
Identities = 70/111 (63%), Positives = 85/111 (76%)
Frame = -2
Query: 800 GGERXXXXXXXXXXXKEQEVAGRIFGAICSSPAVLHKQGLLKDRRATGHPSIISKVTSHA 621
G ER KEQ AGRI+GA+CSSPA+LHKQGLLKD++AT HPS ++K+ A
Sbjct: 340 GAERLSKSRILKKLLKEQNSAGRIYGAVCSSPAILHKQGLLKDKKATAHPSALNKLKDGA 399
Query: 620 GNGADVVIDGKIITSKGLATAADFALTIVSKMYGHARARSVAEGLVFQYPQ 468
N A VVIDGK+ITS+GLAT DFAL IVSK++G+ RARSVAEGLVF+YP+
Sbjct: 400 VNDAVVVIDGKVITSEGLATVTDFALAIVSKLFGNGRARSVAEGLVFEYPR 450
Score = 60.8 bits (146), Expect = 3e-07
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = -2
Query: 752 EQEVAGRIFGAICSSPAV-LHKQGLLKDRRATGHPSIISKVTSHAGNGADVVIDGKIITS 576
+Q R+FGAI ++PAV L GLLK ++ T HP+ K+ + +++ + + TS
Sbjct: 152 KQAEENRLFGAINAAPAVTLLPWGLLKRKKITCHPAFFHKLPTFWAVKSNIQVSNGLTTS 211
Query: 575 KGLATAADFALTIVSKMYGHARARSVAEGLVFQ 477
+G TA FALT+V +++G + AR VAE L+ +
Sbjct: 212 RGPGTAYMFALTLVEQLFGESIAREVAEFLLMR 244
>gb|AFK38256.1| unknown [Lotus japonicus]
Length = 453
Score = 133 bits (335), Expect = 4e-29
Identities = 63/95 (66%), Positives = 79/95 (83%)
Frame = -2
Query: 752 EQEVAGRIFGAICSSPAVLHKQGLLKDRRATGHPSIISKVTSHAGNGADVVIDGKIITSK 573
EQ AGRI+GA+CSSPA+LHKQGLLKD++AT HPS++ K+ A ADVVIDGK+ITS+
Sbjct: 355 EQSSAGRIYGAVCSSPAILHKQGLLKDKKATAHPSVLDKLKEEAIKDADVVIDGKLITSE 414
Query: 572 GLATAADFALTIVSKMYGHARARSVAEGLVFQYPQ 468
GLAT F+L IVSK++G RARSVAEGLVF++P+
Sbjct: 415 GLATVTAFSLAIVSKLFGAGRARSVAEGLVFEFPR 449
Score = 63.5 bits (153), Expect = 5e-08
Identities = 31/87 (35%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = -2
Query: 734 RIFGAICSSPAV-LHKQGLLKDRRATGHPSIISKVTSHAGNGADVVIDGKIITSKGLATA 558
R++GAIC++PAV L GLLK ++ T HP+ + + +++ + G++ TS+G AT
Sbjct: 157 RLYGAICAAPAVTLLPWGLLKRKKTTCHPAFFGDLPTFWAVKSNIQVSGELTTSRGPATT 216
Query: 557 ADFALTIVSKMYGHARARSVAEGLVFQ 477
FAL++V +++G + A+ +AE L+ +
Sbjct: 217 YQFALSLVQQLFGDSVAKELAESLLMR 243
>ref|XP_002518756.1| conserved hypothetical protein [Ricinus communis]
gi|223542137|gb|EEF43681.1| conserved hypothetical
protein [Ricinus communis]
Length = 477
Score = 133 bits (334), Expect = 5e-29
Identities = 64/96 (66%), Positives = 80/96 (83%)
Frame = -2
Query: 752 EQEVAGRIFGAICSSPAVLHKQGLLKDRRATGHPSIISKVTSHAGNGADVVIDGKIITSK 573
EQ+ AGRI+GA+CSS +VL QGLLKD++AT HPS S++T+ +GA VVIDGK+ITSK
Sbjct: 382 EQDAAGRIYGAVCSSISVLQSQGLLKDKKATAHPSFSSQLTNEVVDGAKVVIDGKLITSK 441
Query: 572 GLATAADFALTIVSKMYGHARARSVAEGLVFQYPQS 465
GLAT DFA+ IVSK++G ARARSVAEGLVF YP++
Sbjct: 442 GLATVTDFAMAIVSKLFGEARARSVAEGLVFDYPKT 477
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = -2
Query: 734 RIFGAICSSPAV-LHKQGLLKDRRATGHPSIISKVTSHAGNGADVVIDGKIITSKGLATA 558
R++GAICS+PAV L GLLK ++ T HP+ + K+ + +++ + G++ TS+G T
Sbjct: 185 RLYGAICSAPAVTLLPWGLLKRKQTTCHPAFMDKLPTFWAVKSNIQVSGELTTSRGPGTC 244
Query: 557 ADFALTIVSKMYGHARARSVAEGLV 483
FAL++ +++G + A+ V E L+
Sbjct: 245 FQFALSLSEQLFGESIAKEVGEFLL 269