BLASTX nr result

ID: Coptis24_contig00023998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023998
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277342.1| PREDICTED: SNF1-related protein kinase regul...   111   5e-23
ref|XP_004135193.1| PREDICTED: SNF1-related protein kinase regul...   111   7e-23
ref|XP_002323767.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|XP_003569278.1| PREDICTED: SNF1-related protein kinase regul...   107   1e-21
dbj|BAG91557.1| unnamed protein product [Oryza sativa Japonica G...   106   2e-21

>ref|XP_002277342.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-1-like [Vitis vinifera]
           gi|296086419|emb|CBI32008.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/76 (67%), Positives = 66/76 (86%)
 Frame = -3

Query: 228 IAGRPISDFGLPFTSYEEVISIKGSDLILEAFKRMKEHKIGGLPVIESPGQKLIGNISIR 49
           IA  PISD GLPF S+ EV++I+ ++LILEAFK+MK++KIGGLPV+E P +K++GN+SIR
Sbjct: 276 IAAHPISDLGLPFMSHNEVVTIQSNELILEAFKKMKDNKIGGLPVVEGPRKKIVGNVSIR 335

Query: 48  DIRFLLLQPELFSAFR 1
           DIRFLLL P+LFS FR
Sbjct: 336 DIRFLLLNPDLFSNFR 351


>ref|XP_004135193.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-1-like [Cucumis sativus]
           gi|449478452|ref|XP_004155322.1| PREDICTED: SNF1-related
           protein kinase regulatory subunit gamma-1-like [Cucumis
           sativus]
          Length = 442

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/76 (69%), Positives = 67/76 (88%)
 Frame = -3

Query: 228 IAGRPISDFGLPFTSYEEVISIKGSDLILEAFKRMKEHKIGGLPVIESPGQKLIGNISIR 49
           IA RPISD GLPF S +EVISI+ ++LILEAFK+M+E+ IGGLPV+E P ++++GNISIR
Sbjct: 275 IAARPISDLGLPFVSCKEVISIQSNELILEAFKQMRENHIGGLPVVEGPKKRIVGNISIR 334

Query: 48  DIRFLLLQPELFSAFR 1
           DIR+LLL+PELFS FR
Sbjct: 335 DIRYLLLKPELFSNFR 350


>ref|XP_002323767.1| predicted protein [Populus trichocarpa] gi|222866769|gb|EEF03900.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/76 (67%), Positives = 65/76 (85%)
 Frame = -3

Query: 228 IAGRPISDFGLPFTSYEEVISIKGSDLILEAFKRMKEHKIGGLPVIESPGQKLIGNISIR 49
           IA +PIS+ GLPF S  EV+S++  +LILEAFK+MK++KIGGLPV+E P +K+IGN+SIR
Sbjct: 276 IAAQPISNVGLPFVSANEVVSVQSGELILEAFKKMKDNKIGGLPVVEGPNKKIIGNLSIR 335

Query: 48  DIRFLLLQPELFSAFR 1
           DIR LLL+PELFS FR
Sbjct: 336 DIRHLLLKPELFSNFR 351


>ref|XP_003569278.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-1-like [Brachypodium distachyon]
          Length = 452

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/76 (64%), Positives = 65/76 (85%)
 Frame = -3

Query: 228 IAGRPISDFGLPFTSYEEVISIKGSDLILEAFKRMKEHKIGGLPVIESPGQKLIGNISIR 49
           I+  P+SD GLPF S++EVI++   DLILEAFK MK++KIGG+PV+E P +KL+G++SIR
Sbjct: 273 ISALPLSDLGLPFMSFDEVITVNSDDLILEAFKCMKDNKIGGVPVVEGPKRKLVGSVSIR 332

Query: 48  DIRFLLLQPELFSAFR 1
           DIRFLLL+P+LFS FR
Sbjct: 333 DIRFLLLRPDLFSNFR 348


>dbj|BAG91557.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 228

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/76 (64%), Positives = 64/76 (84%)
 Frame = -3

Query: 228 IAGRPISDFGLPFTSYEEVISIKGSDLILEAFKRMKEHKIGGLPVIESPGQKLIGNISIR 49
           I+  P+SD GLPF S +EVI++   DLILEAFK MK++KIGG+PV+E P +KL+G++SIR
Sbjct: 51  ISALPLSDLGLPFMSLDEVITVNSGDLILEAFKCMKDNKIGGVPVVEGPNKKLVGSVSIR 110

Query: 48  DIRFLLLQPELFSAFR 1
           DIRFLLL+P+LFS FR
Sbjct: 111 DIRFLLLRPDLFSNFR 126


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