BLASTX nr result

ID: Coptis24_contig00023997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023997
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283742.1| PREDICTED: snurportin-1 [Vitis vinifera] gi|...   206   e-102
ref|XP_002321701.1| predicted protein [Populus trichocarpa] gi|2...   191   3e-96
ref|XP_002869701.1| hypothetical protein ARALYDRAFT_492350 [Arab...   188   2e-95
ref|XP_004138050.1| PREDICTED: uncharacterized protein LOC101214...   186   3e-94
ref|NP_567711.1| snurportin-1 [Arabidopsis thaliana] gi|16209705...   187   3e-94

>ref|XP_002283742.1| PREDICTED: snurportin-1 [Vitis vinifera]
           gi|297734416|emb|CBI15663.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  206 bits (524), Expect(2) = e-102
 Identities = 94/119 (78%), Positives = 105/119 (88%)
 Frame = -1

Query: 701 EPEPEPRDFDVARASKLKGAEAREWFSRQLTLPEWMIDIPPRLNQDWYVFARPSGKRCFV 522
           E +  PRD DV +ASKLKG EAR WF+RQL LPEWMID+P RL+ DWYV ARP+GKRCFV
Sbjct: 72  ESQSIPRDIDVRQASKLKGYEARRWFARQLMLPEWMIDVPDRLSHDWYVLARPTGKRCFV 131

Query: 521 VSSDGTTVSRLRNGYVLHHFPSALPNGARTKDVSGPSHSFCLLDCIFHELDQTYYVIDM 345
           VSSDGTTVSRLRNG VLHHFPSALPNGART+D+SG + S+C+LDCIFHELDQTYYVIDM
Sbjct: 132 VSSDGTTVSRLRNGSVLHHFPSALPNGARTRDISGSAQSYCILDCIFHELDQTYYVIDM 190



 Score =  192 bits (487), Expect(2) = e-102
 Identities = 84/97 (86%), Positives = 89/97 (91%)
 Frame = -3

Query: 291 YYVIDMVCWRGYSLYDCTAEFRFFWLSSKLAETGACDTPSLYHRYRFSVVPIYSCDLTGL 112
           YYVIDMVCWRGYSLYDCTAEFRFFW++SKLAETGACD PS YHRYRFSVVPIY+CD  GL
Sbjct: 185 YYVIDMVCWRGYSLYDCTAEFRFFWVNSKLAETGACDPPSPYHRYRFSVVPIYNCDQNGL 244

Query: 111 HTAYAGNVPYVKDGLLFYNKHAHYQTGNTPLALVWKD 1
           +TAY G  PYVKDGLLFYN+HAHYQTGNTPL LVWKD
Sbjct: 245 YTAYTGAAPYVKDGLLFYNRHAHYQTGNTPLTLVWKD 281


>ref|XP_002321701.1| predicted protein [Populus trichocarpa] gi|222868697|gb|EEF05828.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  191 bits (484), Expect(2) = 3e-96
 Identities = 82/97 (84%), Positives = 89/97 (91%)
 Frame = -3

Query: 291 YYVIDMVCWRGYSLYDCTAEFRFFWLSSKLAETGACDTPSLYHRYRFSVVPIYSCDLTGL 112
           YYVIDMVCWRGYSLYDC AEFRFFWL+SKL ETGACD PS YH+YRFS VP+Y+CD  GL
Sbjct: 186 YYVIDMVCWRGYSLYDCAAEFRFFWLNSKLGETGACDPPSFYHKYRFSTVPVYNCDQNGL 245

Query: 111 HTAYAGNVPYVKDGLLFYNKHAHYQTGNTPLALVWKD 1
            +AY+G+VPYVKDGLLFYNKHAHYQTGNTPLALVWKD
Sbjct: 246 FSAYSGDVPYVKDGLLFYNKHAHYQTGNTPLALVWKD 282



 Score =  187 bits (475), Expect(2) = 3e-96
 Identities = 83/113 (73%), Positives = 100/113 (88%)
 Frame = -1

Query: 683 RDFDVARASKLKGAEAREWFSRQLTLPEWMIDIPPRLNQDWYVFARPSGKRCFVVSSDGT 504
           +D DV  A++LKGAEAR+WF++QL L EWMID+P RL+ DWYVFARP+GKRCFVVS++GT
Sbjct: 79  QDLDVRHAARLKGAEARKWFAKQLMLHEWMIDVPDRLSDDWYVFARPAGKRCFVVSTNGT 138

Query: 503 TVSRLRNGYVLHHFPSALPNGARTKDVSGPSHSFCLLDCIFHELDQTYYVIDM 345
           TVSR RNG +LH FPSALPNGA+ +D SGP+ S+C+LDCIFHELDQTYYVIDM
Sbjct: 139 TVSRQRNGSILHRFPSALPNGAKKRDGSGPNQSYCILDCIFHELDQTYYVIDM 191


>ref|XP_002869701.1| hypothetical protein ARALYDRAFT_492350 [Arabidopsis lyrata subsp.
           lyrata] gi|297315537|gb|EFH45960.1| hypothetical protein
           ARALYDRAFT_492350 [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score =  188 bits (478), Expect(2) = 2e-95
 Identities = 85/117 (72%), Positives = 100/117 (85%)
 Frame = -1

Query: 695 EPEPRDFDVARASKLKGAEAREWFSRQLTLPEWMIDIPPRLNQDWYVFARPSGKRCFVVS 516
           E E   FDV +AS+L+G EAR+WF++QL LPEWMID+P  L+QDWYV ARP+GKRCFVVS
Sbjct: 72  ELESSSFDVRQASRLRGPEARKWFAKQLMLPEWMIDVPDNLSQDWYVLARPAGKRCFVVS 131

Query: 515 SDGTTVSRLRNGYVLHHFPSALPNGARTKDVSGPSHSFCLLDCIFHELDQTYYVIDM 345
           SDGTTVSR+RNG +LHHFPSALP GAR K  SGP++S+ +LDCIFHE DQTYYVIDM
Sbjct: 132 SDGTTVSRVRNGSILHHFPSALPGGARKKGASGPANSYSILDCIFHESDQTYYVIDM 188



 Score =  187 bits (475), Expect(2) = 2e-95
 Identities = 78/97 (80%), Positives = 88/97 (90%)
 Frame = -3

Query: 291 YYVIDMVCWRGYSLYDCTAEFRFFWLSSKLAETGACDTPSLYHRYRFSVVPIYSCDLTGL 112
           YYVIDMVCWRGYSLY+CTAEFRFFW+ SKLAETGACD PS YH++RFS VP Y+CD +GL
Sbjct: 183 YYVIDMVCWRGYSLYECTAEFRFFWMQSKLAETGACDPPSFYHKFRFSAVPFYNCDQSGL 242

Query: 111 HTAYAGNVPYVKDGLLFYNKHAHYQTGNTPLALVWKD 1
           H+AY G++PYVKDGLLFYNKHAHY TGNTPL L+WKD
Sbjct: 243 HSAYTGSLPYVKDGLLFYNKHAHYHTGNTPLVLIWKD 279


>ref|XP_004138050.1| PREDICTED: uncharacterized protein LOC101214543 [Cucumis sativus]
          Length = 432

 Score =  186 bits (472), Expect(2) = 3e-94
 Identities = 83/117 (70%), Positives = 100/117 (85%)
 Frame = -1

Query: 695 EPEPRDFDVARASKLKGAEAREWFSRQLTLPEWMIDIPPRLNQDWYVFARPSGKRCFVVS 516
           EP  ++ DV +ASKLK +EAR+WFS+QL LPEWMID+P RL+ +WYVFARPSGKRCFVVS
Sbjct: 89  EPALKELDVRQASKLKSSEARKWFSKQLLLPEWMIDVPDRLSDEWYVFARPSGKRCFVVS 148

Query: 515 SDGTTVSRLRNGYVLHHFPSALPNGARTKDVSGPSHSFCLLDCIFHELDQTYYVIDM 345
           S+GTT+SRLRNG +LH FPS+LPNGA+TK  SG   ++ +LDCIFHE DQTYYVIDM
Sbjct: 149 SNGTTISRLRNGSILHRFPSSLPNGAKTKKASGSGQTYSILDCIFHETDQTYYVIDM 205



 Score =  185 bits (470), Expect(2) = 3e-94
 Identities = 78/97 (80%), Positives = 88/97 (90%)
 Frame = -3

Query: 291 YYVIDMVCWRGYSLYDCTAEFRFFWLSSKLAETGACDTPSLYHRYRFSVVPIYSCDLTGL 112
           YYVIDM+CWRGYSLYDC AEFRFFWL+SKLAE+GAC+ PS YH+Y+FS+VP+YSCD  GL
Sbjct: 200 YYVIDMICWRGYSLYDCAAEFRFFWLNSKLAESGACELPSYYHKYKFSLVPVYSCDQNGL 259

Query: 111 HTAYAGNVPYVKDGLLFYNKHAHYQTGNTPLALVWKD 1
           H AYAG  P+VKDGLLFYNKH+HYQ GNTPLALVWKD
Sbjct: 260 HAAYAGAAPFVKDGLLFYNKHSHYQPGNTPLALVWKD 296


>ref|NP_567711.1| snurportin-1 [Arabidopsis thaliana] gi|16209705|gb|AAL14409.1|
           AT4g24880/F13M23_20 [Arabidopsis thaliana]
           gi|115311481|gb|ABI93921.1| At4g24880 [Arabidopsis
           thaliana] gi|332659572|gb|AEE84972.1| snurportin-1
           [Arabidopsis thaliana]
          Length = 417

 Score =  187 bits (476), Expect(2) = 3e-94
 Identities = 78/97 (80%), Positives = 90/97 (92%)
 Frame = -3

Query: 291 YYVIDMVCWRGYSLYDCTAEFRFFWLSSKLAETGACDTPSLYHRYRFSVVPIYSCDLTGL 112
           YYVIDMVCWRGYSLY+CT+EFRFFWL SKLAETGACD PS+YH++RFSVVP Y+CD +GL
Sbjct: 184 YYVIDMVCWRGYSLYECTSEFRFFWLQSKLAETGACDPPSVYHKFRFSVVPFYNCDQSGL 243

Query: 111 HTAYAGNVPYVKDGLLFYNKHAHYQTGNTPLALVWKD 1
           H+AY G++PYV+DGLLFYNKHAHY TGNTPL L+WKD
Sbjct: 244 HSAYTGSLPYVRDGLLFYNKHAHYHTGNTPLVLIWKD 280



 Score =  184 bits (466), Expect(2) = 3e-94
 Identities = 84/117 (71%), Positives = 98/117 (83%)
 Frame = -1

Query: 695 EPEPRDFDVARASKLKGAEAREWFSRQLTLPEWMIDIPPRLNQDWYVFARPSGKRCFVVS 516
           E E   FDV +AS+L+G EAR+WF++QL LPEWMID+P  L+QDWYV ARP+GKRCFVVS
Sbjct: 73  ESESSSFDVRQASRLRGPEARKWFAKQLMLPEWMIDVPDNLSQDWYVLARPAGKRCFVVS 132

Query: 515 SDGTTVSRLRNGYVLHHFPSALPNGARTKDVSGPSHSFCLLDCIFHELDQTYYVIDM 345
           SDGTTVSR+RNG  LH FPSALP GAR K  SGP++S+ +LDCIFHE DQTYYVIDM
Sbjct: 133 SDGTTVSRVRNGSTLHLFPSALPGGARKKGASGPANSYSILDCIFHESDQTYYVIDM 189


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