BLASTX nr result

ID: Coptis24_contig00023994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023994
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251...   238   1e-60
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]   238   1e-60
ref|XP_004163775.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   238   2e-60
ref|XP_004145778.1| PREDICTED: uncharacterized protein LOC101203...   238   2e-60
ref|XP_002268620.1| PREDICTED: uncharacterized protein LOC100247...   230   2e-58

>ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251030 [Vitis vinifera]
          Length = 768

 Score =  238 bits (607), Expect = 1e-60
 Identities = 131/249 (52%), Positives = 163/249 (65%), Gaps = 9/249 (3%)
 Frame = -3

Query: 722 MEGKKVIAICQFGGEFETNKDGTLSYKGGEAHAIDIDHGTVFEDLKSEIADLRNSGSGLM 543
           M GKK+IAICQ GGEFE +KDG+LSY+GG+AHAIDID    F + K E+A++ N     M
Sbjct: 1   MAGKKIIAICQSGGEFEADKDGSLSYRGGDAHAIDIDDQMKFNEFKMEVAEMFNCSISTM 60

Query: 542 SIKYFLPGNRKTLITISNDRELKRMIDFNRDSVMVDVFVTMEGIVGHEHSNMPASRSSRT 363
           SIKYFLP N+KTLITISND++LKRMI F+ DSV VD++V  E +V  + SNMPASRSSRT
Sbjct: 61  SIKYFLPKNKKTLITISNDKDLKRMIKFHVDSVTVDIYVMTEEVVALDVSNMPASRSSRT 120

Query: 362 TLSEAAVPPDV---IPSNAGNENGVHTQNEG----IVD--TPTGXXXXXXXXXXXXXVLE 210
           TLSEA VP D    +  +  ++      + G    +VD  T                VL 
Sbjct: 121 TLSEAVVPVDAPLDMKDDMVDDTTYPDVSLGLPLDVVDDTTHVDVDAQITMPNEISPVLP 180

Query: 209 HLVSCVVKDYDHPSSWENAITGVRQRFRSANEFREALRRYAIAHKFAYKFKKNDSQRVTV 30
             +S   K       W+N ITGV QRF   +EFREALR+YAIAH+FA+++KKNDS RVTV
Sbjct: 181 LSISNEEKHVKAAQQWQNTITGVGQRFSGVHEFREALRKYAIAHQFAFRYKKNDSHRVTV 240

Query: 29  NCKSENCPW 3
            CK+E CPW
Sbjct: 241 KCKAEGCPW 249


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score =  238 bits (607), Expect = 1e-60
 Identities = 131/249 (52%), Positives = 163/249 (65%), Gaps = 9/249 (3%)
 Frame = -3

Query: 722 MEGKKVIAICQFGGEFETNKDGTLSYKGGEAHAIDIDHGTVFEDLKSEIADLRNSGSGLM 543
           M GKK+IAICQ GGEFE +KDG+LSY+GG+AHAIDID    F + K E+A++ N     M
Sbjct: 1   MAGKKIIAICQSGGEFEADKDGSLSYRGGDAHAIDIDDQMKFNEFKMEVAEMFNCSISTM 60

Query: 542 SIKYFLPGNRKTLITISNDRELKRMIDFNRDSVMVDVFVTMEGIVGHEHSNMPASRSSRT 363
           SIKYFLP N+KTLITISND++LKRMI F+ DSV VD++V  E +V  + SNMPASRSSRT
Sbjct: 61  SIKYFLPKNKKTLITISNDKDLKRMIKFHVDSVTVDIYVMTEEVVALDVSNMPASRSSRT 120

Query: 362 TLSEAAVPPDV---IPSNAGNENGVHTQNEG----IVD--TPTGXXXXXXXXXXXXXVLE 210
           TLSEA VP D    +  +  ++      + G    +VD  T                VL 
Sbjct: 121 TLSEAVVPVDAPLDMKDDMVDDTTYPDVSLGLPLDVVDDTTHVDVDAQITMPNEISPVLP 180

Query: 209 HLVSCVVKDYDHPSSWENAITGVRQRFRSANEFREALRRYAIAHKFAYKFKKNDSQRVTV 30
             +S   K       W+N ITGV QRF   +EFREALR+YAIAH+FA+++KKNDS RVTV
Sbjct: 181 LSISNEEKHVKAAQQWQNTITGVGQRFSGVHEFREALRKYAIAHQFAFRYKKNDSHRVTV 240

Query: 29  NCKSENCPW 3
            CK+E CPW
Sbjct: 241 KCKAEGCPW 249


>ref|XP_004163775.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203656
           [Cucumis sativus]
          Length = 770

 Score =  238 bits (606), Expect = 2e-60
 Identities = 129/250 (51%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
 Frame = -3

Query: 722 MEGKKVIAICQFGGEFETNKDGTLSYKGGEAHAIDIDHGTVFEDLKSEIADLRNSGSGLM 543
           M  KK+IAICQ GGEFET +DG LSY GG+AHAID+D    F + K EIA++ N     +
Sbjct: 1   MAEKKIIAICQSGGEFETGRDGMLSYHGGDAHAIDVDDKMKFNEFKMEIAEMFNFDVDNV 60

Query: 542 SIKYFLPGNRKTLITISNDRELKRMIDFNRDSVMVDVFVTMEGIVGHEHSNMPASRSSRT 363
           SIKYFLPGNRKTLIT+SND++LKRM+ F+ DS  VD+FV ME ++    SN+PASRSSRT
Sbjct: 61  SIKYFLPGNRKTLITLSNDKDLKRMLKFHGDSTTVDIFVIMEEVMAPNISNLPASRSSRT 120

Query: 362 TLSEAAVPPDVIPSNAGNENGVHTQN-------EG---IVDTPTGXXXXXXXXXXXXXVL 213
           TLSE  VP D  P      +G+   N       +G   +VD                 +L
Sbjct: 121 TLSETVVPVDGTPLTV--VHGIEDDNIESDIPLDGALDVVDDTNPLVNHIDIAGDITPIL 178

Query: 212 EHLVSCVVKDYDHPSSWENAITGVRQRFRSANEFREALRRYAIAHKFAYKFKKNDSQRVT 33
             L S   K+      W+N ITGV QRF S +EFRE+LR+YAIAH+FA+++KKNDS RVT
Sbjct: 179 PLLGSSDEKNGKGVQQWQNTITGVGQRFSSVHEFRESLRKYAIAHQFAFRYKKNDSHRVT 238

Query: 32  VNCKSENCPW 3
           V CK+E CPW
Sbjct: 239 VKCKAEGCPW 248


>ref|XP_004145778.1| PREDICTED: uncharacterized protein LOC101203656 [Cucumis sativus]
          Length = 770

 Score =  238 bits (606), Expect = 2e-60
 Identities = 129/250 (51%), Positives = 161/250 (64%), Gaps = 10/250 (4%)
 Frame = -3

Query: 722 MEGKKVIAICQFGGEFETNKDGTLSYKGGEAHAIDIDHGTVFEDLKSEIADLRNSGSGLM 543
           M  KK+IAICQ GGEFET +DG LSY GG+AHAID+D    F + K EIA++ N     +
Sbjct: 1   MAEKKIIAICQSGGEFETGRDGMLSYHGGDAHAIDVDDKMKFNEFKMEIAEMFNFDVDNV 60

Query: 542 SIKYFLPGNRKTLITISNDRELKRMIDFNRDSVMVDVFVTMEGIVGHEHSNMPASRSSRT 363
           SIKYFLPGNRKTLIT+SND++LKRM+ F+ DS  VD+FV ME ++    SN+PASRSSRT
Sbjct: 61  SIKYFLPGNRKTLITLSNDKDLKRMLKFHGDSTTVDIFVIMEEVMAPNISNLPASRSSRT 120

Query: 362 TLSEAAVPPDVIPSNAGNENGVHTQN-------EG---IVDTPTGXXXXXXXXXXXXXVL 213
           TLSE  VP D  P      +G+   N       +G   +VD                 +L
Sbjct: 121 TLSETVVPVDGTPLTV--VHGIEDDNIESDIPLDGALDVVDDTNPLVNHIDIAGDITPIL 178

Query: 212 EHLVSCVVKDYDHPSSWENAITGVRQRFRSANEFREALRRYAIAHKFAYKFKKNDSQRVT 33
             L S   K+      W+N ITGV QRF S +EFRE+LR+YAIAH+FA+++KKNDS RVT
Sbjct: 179 PLLGSSDEKNGKGVQQWQNTITGVGQRFSSVHEFRESLRKYAIAHQFAFRYKKNDSHRVT 238

Query: 32  VNCKSENCPW 3
           V CK+E CPW
Sbjct: 239 VKCKAEGCPW 248


>ref|XP_002268620.1| PREDICTED: uncharacterized protein LOC100247698 [Vitis vinifera]
          Length = 746

 Score =  230 bits (587), Expect = 2e-58
 Identities = 130/241 (53%), Positives = 151/241 (62%), Gaps = 1/241 (0%)
 Frame = -3

Query: 722 MEGKKVIAICQFGGEFETNKDGTLSYKGGEAHAIDIDHGTVFEDLKSEIADLRNSGSGLM 543
           M  KKVIAICQ GGEF TNKDG+LSY GGEA+AID+D  T   D K E+A++ N     M
Sbjct: 1   MAAKKVIAICQSGGEFVTNKDGSLSYNGGEAYAIDVDQQTQLSDFKLEVAEMFNCSIDTM 60

Query: 542 SIKYFLPGNRKTLITISNDRELKRMIDFNRDSVMVDVFVTMEGIVGHEHSNMPASRSSRT 363
           SIKYFLP N+KTLITIS D++LKRM+ F  DSV VD+F+  E  V    S MPASRSSRT
Sbjct: 61  SIKYFLPDNKKTLITISKDKDLKRMVKFLGDSVTVDIFIMTEEAVPRNQSIMPASRSSRT 120

Query: 362 TLSEAAVPPDVIPSNAGNENGVHTQNEGIVD-TPTGXXXXXXXXXXXXXVLEHLVSCVVK 186
           T+SEA VP  V P +A            +VD T                    ++S   K
Sbjct: 121 TVSEAVVPA-VAPVDA------------VVDMTHAIDKVDMDMANYTHSDNAPVISNDDK 167

Query: 185 DYDHPSSWENAITGVRQRFRSANEFREALRRYAIAHKFAYKFKKNDSQRVTVNCKSENCP 6
                  WEN ITGV QRF S NEFREAL +Y+IAH FAYK+KKNDS RVTV CKS+ CP
Sbjct: 168 HQKAAQQWENTITGVDQRFNSFNEFREALHKYSIAHGFAYKYKKNDSHRVTVKCKSQGCP 227

Query: 5   W 3
           W
Sbjct: 228 W 228


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