BLASTX nr result

ID: Coptis24_contig00023981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023981
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513045.1| conserved hypothetical protein [Ricinus comm...   174   9e-42
ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244...   172   3e-41
emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera]   172   3e-41
ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250...   169   2e-40
emb|CBI24243.3| unnamed protein product [Vitis vinifera]              167   1e-39

>ref|XP_002513045.1| conserved hypothetical protein [Ricinus communis]
           gi|223548056|gb|EEF49548.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score =  174 bits (440), Expect = 9e-42
 Identities = 79/118 (66%), Positives = 97/118 (82%), Gaps = 3/118 (2%)
 Frame = -1

Query: 346 LLMLGFFFATYNLITLVLHNRSSG---YDNSDRGSLSMLHDPITRMPERVKKQETVRLPF 176
           LL+LGFFFATYNL+T+++HNRS G   +D+SD G   +  DP+  MPE  KK +  R+PF
Sbjct: 11  LLVLGFFFATYNLVTMIMHNRSVGKRIHDDSDGG---IFFDPVIEMPEDAKKSKNARMPF 67

Query: 175 HVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGFTRVLHSGVPDKLMDEIPTYVV 2
           HVALTATD PY++WQCRIMYYWYK+ KD+PGSD+GGFTR+LHSG PD LMDEIPT+VV
Sbjct: 68  HVALTATDAPYSKWQCRIMYYWYKQKKDLPGSDLGGFTRILHSGNPDNLMDEIPTFVV 125


>ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244671 [Vitis vinifera]
          Length = 362

 Score =  172 bits (435), Expect = 3e-41
 Identities = 76/118 (64%), Positives = 94/118 (79%)
 Frame = -1

Query: 355 FRSLLMLGFFFATYNLITLVLHNRSSGYDNSDRGSLSMLHDPITRMPERVKKQETVRLPF 176
           F  +L LGFFFATYNL+T+ +HNR++G    D     +L DPI  MPE V+K +  +LPF
Sbjct: 8   FLVVLSLGFFFATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKPKNAKLPF 67

Query: 175 HVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGFTRVLHSGVPDKLMDEIPTYVV 2
           H+ALTATD PY++WQCRIMYYWYKK KD+PGS+MGGFTR+LHSG PD LM+EIPT+VV
Sbjct: 68  HIALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSGSPDNLMEEIPTFVV 125


>emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera]
          Length = 416

 Score =  172 bits (435), Expect = 3e-41
 Identities = 76/118 (64%), Positives = 94/118 (79%)
 Frame = -1

Query: 355 FRSLLMLGFFFATYNLITLVLHNRSSGYDNSDRGSLSMLHDPITRMPERVKKQETVRLPF 176
           F  +L LGFFFATYNL+T+ +HNR++G    D     +L DPI  MPE V+K +  +LPF
Sbjct: 8   FLVVLSLGFFFATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKPKNAKLPF 67

Query: 175 HVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGFTRVLHSGVPDKLMDEIPTYVV 2
           H+ALTATD PY++WQCRIMYYWYKK KD+PGS+MGGFTR+LHSG PD LM+EIPT+VV
Sbjct: 68  HIALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSGSPDNLMEEIPTFVV 125


>ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250010 [Vitis vinifera]
          Length = 367

 Score =  169 bits (428), Expect = 2e-40
 Identities = 81/115 (70%), Positives = 90/115 (78%)
 Frame = -1

Query: 346 LLMLGFFFATYNLITLVLHNRSSGYDNSDRGSLSMLHDPITRMPERVKKQETVRLPFHVA 167
           LL LGFFFATYNL+T+++HNR SG  N       +  DPITRM +  KK     L FHVA
Sbjct: 17  LLALGFFFATYNLLTMIMHNRGSGLGNWMTDDFDVF-DPITRMTKETKKVGNRNLYFHVA 75

Query: 166 LTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGFTRVLHSGVPDKLMDEIPTYVV 2
           LTATD PY+QWQCRIMYYWYKKVKDMPGS+MGGFTRVLHSG PD LMDEIPT+VV
Sbjct: 76  LTATDAPYSQWQCRIMYYWYKKVKDMPGSEMGGFTRVLHSGSPDSLMDEIPTFVV 130


>emb|CBI24243.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/115 (68%), Positives = 90/115 (78%)
 Frame = -1

Query: 346 LLMLGFFFATYNLITLVLHNRSSGYDNSDRGSLSMLHDPITRMPERVKKQETVRLPFHVA 167
           LL LGFFFATYNL+T+++HNR + +D         + DPITRM +  KK     L FHVA
Sbjct: 17  LLALGFFFATYNLLTMIMHNRGNDFD---------VFDPITRMTKETKKVGNRNLYFHVA 67

Query: 166 LTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGFTRVLHSGVPDKLMDEIPTYVV 2
           LTATD PY+QWQCRIMYYWYKKVKDMPGS+MGGFTRVLHSG PD LMDEIPT+VV
Sbjct: 68  LTATDAPYSQWQCRIMYYWYKKVKDMPGSEMGGFTRVLHSGSPDSLMDEIPTFVV 122


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