BLASTX nr result

ID: Coptis24_contig00023978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023978
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526758.1| Disease resistance protein RGA2, putative [R...    55   5e-06

>ref|XP_002526758.1| Disease resistance protein RGA2, putative [Ricinus communis]
           gi|223533885|gb|EEF35612.1| Disease resistance protein
           RGA2, putative [Ricinus communis]
          Length = 1100

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
 Frame = -2

Query: 197 NLVVIGLIQCRNCQNLPALGQLPSLKEVHLEELDALQFIEGGSVVRRQRE----WFPSLK 30
           +LV + +  C NCQNLP L Q PSLK + L++L+ L++IE G    R       +FPSL+
Sbjct: 781 SLVELRIDNCINCQNLPPLDQFPSLKHLTLDKLNDLKYIESGITYDRAESGPALFFPSLE 840

Query: 29  KIFLFANPN 3
           K++L   PN
Sbjct: 841 KLWLRNCPN 849


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