BLASTX nr result

ID: Coptis24_contig00023977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023977
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|2...   230   3e-58
gb|AFK40756.1| unknown [Medicago truncatula]                          221   2e-55
ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-tra...   218   2e-54
ref|XP_004134516.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   214   3e-53
ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp....   209   7e-52

>ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|222845172|gb|EEE82719.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  230 bits (587), Expect = 3e-58
 Identities = 124/201 (61%), Positives = 139/201 (69%), Gaps = 5/201 (2%)
 Frame = +3

Query: 111 HTPKKISIPTKDL----VHITNAASTR-SVSSQHNLELQQPLHLSKRETIGLSFCLGLTS 275
           +TP+ +S P   L    +  T  +S + S  SQ N   Q  L   +RE IGL FC G   
Sbjct: 11  YTPRNLSAPNTTLPAKNLDTTKVSSIKFSSHSQENFSRQLQL-FKRREAIGLGFCAGFLD 69

Query: 276 VFTQQPQIALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFD 455
           V  QQ   A AEEA  C+ TVAPSGL FCD++VG GLEA  GQLIKAHYVGKLE+GKIFD
Sbjct: 70  VLLQQQLTATAEEA-PCELTVAPSGLAFCDKIVGTGLEAVKGQLIKAHYVGKLESGKIFD 128

Query: 456 SSYNRGKPLTFRIGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPELGYGVRGAGCKA 635
           SSYNRGKPLTFR+GVGEV              PPMLAGGKR LKLPPEL YG+RGAGCK 
Sbjct: 129 SSYNRGKPLTFRVGVGEVIKGWDQGILGGDGIPPMLAGGKRKLKLPPELAYGMRGAGCKG 188

Query: 636 GSCVIPPNSVLLFDVEFIGKA 698
           GSC+IPP+SVLLFDVEFIGKA
Sbjct: 189 GSCIIPPDSVLLFDVEFIGKA 209


>gb|AFK40756.1| unknown [Medicago truncatula]
          Length = 207

 Score =  221 bits (562), Expect = 2e-55
 Identities = 117/194 (60%), Positives = 136/194 (70%), Gaps = 4/194 (2%)
 Frame = +3

Query: 129 SIPTKDLVHITNAASTRSVSSQHN--LELQQPLHLSKRETIGLSFCLGLTSVFTQQPQI- 299
           S+  + L H+ +  +T SV  Q    + +Q+   L +RE IGLS   GL     Q P I 
Sbjct: 15  SLQPQKLNHLNSLTTTCSVQVQQQPPVLVQKDNQLKRREAIGLSLSFGLLHSLLQ-PIIP 73

Query: 300 -ALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDSSYNRGK 476
            A A EA+ CQ TVAPSGL +CD+VVGYG +A  GQLIKAHYVG+LENGK+FDSSYNRGK
Sbjct: 74  TATAAEAVPCQLTVAPSGLSYCDKVVGYGPQAVKGQLIKAHYVGRLENGKVFDSSYNRGK 133

Query: 477 PLTFRIGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIPP 656
           PLTFR+GVGEV              PPML GGKRTLKLPPE GYG RGAGCK GSCVIPP
Sbjct: 134 PLTFRVGVGEVIKGWDVGILGDDGIPPMLTGGKRTLKLPPEFGYGSRGAGCKGGSCVIPP 193

Query: 657 NSVLLFDVEFIGKA 698
           ++VLLFDVEF+GKA
Sbjct: 194 DAVLLFDVEFVGKA 207


>ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-trans isomerase 3,
           chloroplastic [Vitis vinifera]
           gi|297738045|emb|CBI27246.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  218 bits (554), Expect = 2e-54
 Identities = 113/186 (60%), Positives = 129/186 (69%)
 Frame = +3

Query: 141 KDLVHITNAASTRSVSSQHNLELQQPLHLSKRETIGLSFCLGLTSVFTQQPQIALAEEAL 320
           K L H   ++S R +    N  L       +RE IG  FC  +  VF Q  Q ++A +  
Sbjct: 37  KILSHHQESSSPRPLQINENSPL-----FGRREAIGFGFCFSILDVFLQA-QPSVAAQTA 90

Query: 321 KCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRIGV 500
            C+ TVAPSGL FCD+VVG G EA  GQLIKAHYVGKLE+GK+FDSSY+RGKPLTFRIGV
Sbjct: 91  PCELTVAPSGLAFCDKVVGTGPEAVEGQLIKAHYVGKLESGKVFDSSYDRGKPLTFRIGV 150

Query: 501 GEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIPPNSVLLFDV 680
           GEV              PPMLAGGKRTLKLPPELGYG RGAGC+ GSC+IPP+SVLLFDV
Sbjct: 151 GEVIRGWDQGILGGDGVPPMLAGGKRTLKLPPELGYGTRGAGCRGGSCIIPPDSVLLFDV 210

Query: 681 EFIGKA 698
           EFIGKA
Sbjct: 211 EFIGKA 216


>ref|XP_004134516.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13,
           chloroplastic-like isoform 1 [Cucumis sativus]
          Length = 214

 Score =  214 bits (544), Expect = 3e-53
 Identities = 118/210 (56%), Positives = 135/210 (64%), Gaps = 7/210 (3%)
 Frame = +3

Query: 90  AISLVVPHT--PKKISIP----TKDLVHITNAASTRSVSSQHNLELQQ-PLHLSKRETIG 248
           ++  V P T   K IS+     TK +   T A + +       LE ++ P    +RE IG
Sbjct: 7   SVGAVTPRTLSSKDISLDKCLTTKQVSKFTYARTPKINFPHQKLEAKENPASFGRREAIG 66

Query: 249 LSFCLGLTSVFTQQPQIALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVG 428
             F LGL  V  Q   +  A EA  C+ T APSGL FCD+VVG G EA  GQLIKAHYVG
Sbjct: 67  CGFLLGLGKVLLQP--LPAAAEATPCELTTAPSGLAFCDKVVGSGPEAEKGQLIKAHYVG 124

Query: 429 KLENGKIFDSSYNRGKPLTFRIGVGEVXXXXXXXXXXXXXXPPMLAGGKRTLKLPPELGY 608
           KLE+GK+FDSSYNRGKPLTFR+GVGEV              P ML GGKR LKLPPELGY
Sbjct: 125 KLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPPELGY 184

Query: 609 GVRGAGCKAGSCVIPPNSVLLFDVEFIGKA 698
           G RGAGC+ GSC+IPPNSVLLFDVEFIGKA
Sbjct: 185 GARGAGCRGGSCIIPPNSVLLFDVEFIGKA 214


>ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311065|gb|EFH41489.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  209 bits (532), Expect = 7e-52
 Identities = 108/180 (60%), Positives = 122/180 (67%), Gaps = 1/180 (0%)
 Frame = +3

Query: 162 NAASTRSVSSQHNLELQQPLHLSKRETI-GLSFCLGLTSVFTQQPQIALAEEALKCQFTV 338
           N  +T+  SS   L   Q     +RE I G  F +GL         ++   E   C+F+V
Sbjct: 35  NLRNTQKASSDPELSFVQLSSCGRREAIIGFGFSIGLLD------NVSALAETTSCEFSV 88

Query: 339 APSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRIGVGEVXXX 518
           +PSGL FCD+VVGYG EA  GQLIKAHYVGKLENGK+FDSSYNRGKPLTFRIGVGEV   
Sbjct: 89  SPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIRG 148

Query: 519 XXXXXXXXXXXPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIPPNSVLLFDVEFIGKA 698
                      PPML GGKRTLK+PPEL YG RGAGCK GSC+IPP SVLLFD+EFIGKA
Sbjct: 149 WDQGILGSDGIPPMLTGGKRTLKIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEFIGKA 208


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