BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023975
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...   291   2e-76
emb|CBI39748.3| unnamed protein product [Vitis vinifera]              281   2e-73
ref|XP_002522771.1| conserved hypothetical protein [Ricinus comm...   278   1e-72
ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PAR...   262   1e-67
ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PAR...   257   3e-66

>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score =  291 bits (744), Expect = 2e-76
 Identities = 157/294 (53%), Positives = 204/294 (69%), Gaps = 11/294 (3%)
 Frame = +3

Query: 3    QVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYMN 182
            QVD+MRSSNWNSGAKHEAGYDAFMTGCVFAQA S+LGIDFK H  S+   +N+ LQK++N
Sbjct: 443  QVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSNLGIDFKKHSSSANLAHNKNLQKHVN 502

Query: 183  HLYVSWRNGSIIDLCTGKIIPETSV-QKSKQRYPKVIFQNIVLLSGFSLNLKPAELKECL 359
            HLY SW NG IIDL TG  I  T+V    K+RYPK++F NIV++ GF   L   +++EC+
Sbjct: 503  HLYFSWVNGDIIDLGTGNRIAATTVCYNLKRRYPKILFSNIVIVWGFPSQLSSKKIRECI 562

Query: 360  CKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDGG 539
             K FG  S+++IY+LD+T  F+QFSK ELV+DFL LKE LE   D ++VLHPLS +L+GG
Sbjct: 563  SKAFGPISVTTIYHLDETAVFVQFSKPELVADFLVLKETLETIQDPISVLHPLSVLLEGG 622

Query: 540  NTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTK------EEKLRED---AESEGAE 692
            NT A  YETYK ICSS IS+V+FADQ KAV +K KTK      + K +ED   ++  GA 
Sbjct: 623  NTCAASYETYKEICSSPISKVMFADQAKAVGIKWKTKLIESKEKVKTQEDESFSKENGAT 682

Query: 693  NYNSDSVTKNDTGQRSCETANDS-SQFQLSCVELMDTLCGPESQLGKQTRASKL 851
            +  SD   K+ T  R  E   D+ S  ++S  E++D+L   +++L K  R + L
Sbjct: 683  DAASDPADKSKT--RKIEDVIDNLSDDRISGSEIIDSLYAAQTKLSKHIRTTNL 734


>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  281 bits (718), Expect = 2e-73
 Identities = 138/237 (58%), Positives = 179/237 (75%), Gaps = 1/237 (0%)
 Frame = +3

Query: 3    QVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYMN 182
            QVD+MRSSNWNSGAKHEAGYDAFMTGCVFAQA S+LGIDFK H  S+   +N+ LQK++N
Sbjct: 443  QVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSNLGIDFKKHSSSANLAHNKNLQKHVN 502

Query: 183  HLYVSWRNGSIIDLCTGKIIPETSV-QKSKQRYPKVIFQNIVLLSGFSLNLKPAELKECL 359
            HLY SW NG IIDL TG  I  T+V    K+RYPK++F NIV++ GF   L   +++EC+
Sbjct: 503  HLYFSWVNGDIIDLGTGNRIAATTVCYNLKRRYPKILFSNIVIVWGFPSQLSSKKIRECI 562

Query: 360  CKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDGG 539
             K FG  S+++IY+LD+T  F+QFSK ELV+DFL LKE LE   D ++VLHPLS +L+GG
Sbjct: 563  SKAFGPISVTTIYHLDETAVFVQFSKPELVADFLVLKETLETIQDPISVLHPLSVLLEGG 622

Query: 540  NTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTKEEKLREDAESEGAENYNSDS 710
            NT A  YETYK ICSS IS+V+FADQ KAV +K KTK  + +E  +++  E+++ ++
Sbjct: 623  NTCAASYETYKEICSSPISKVMFADQAKAVGIKWKTKLIESKEKVKTQEDESFSKEN 679


>ref|XP_002522771.1| conserved hypothetical protein [Ricinus communis]
            gi|223538009|gb|EEF39622.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 699

 Score =  278 bits (712), Expect = 1e-72
 Identities = 145/282 (51%), Positives = 192/282 (68%), Gaps = 9/282 (3%)
 Frame = +3

Query: 3    QVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYMN 182
            QVD+ RSSNW+SG KHEAGYDAFMTGCVFAQA +HLG+DFK    S    +NE+LQK +N
Sbjct: 413  QVDDTRSSNWSSGVKHEAGYDAFMTGCVFAQACNHLGVDFKLKSSSENLAHNEKLQKLIN 472

Query: 183  HLYVSWRNGSIIDLCTGKIIPET-SVQKSKQRYPKVIFQNIVLLSGFSLNLKPAELKECL 359
             LY+SW N  IIDL TG  + E+      +++ P ++F+NIVL+  F   LK  E++EC+
Sbjct: 473  LLYISWINWDIIDLRTGNRVAESLGFNYLRKQRPNILFKNIVLIWRFPSRLKAGEIRECI 532

Query: 360  CKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDGG 539
            CK FGL+S++SIY++D+T  F+QFSK ELVS+FL LKE+L++ ND ++VLHPLSK+LDGG
Sbjct: 533  CKAFGLNSVTSIYHVDETAVFVQFSKAELVSEFLVLKESLDRSNDPISVLHPLSKLLDGG 592

Query: 540  NTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTKEEKLREDAES--------EGAEN 695
            NT A DYETYK ICSS IS+V FADQ  AV +  KTK  + + DAES        E A  
Sbjct: 593  NTCAADYETYKEICSSPISKVRFADQAAAVGINWKTKLVESKIDAESQHQDSFYKEDART 652

Query: 696  YNSDSVTKNDTGQRSCETANDSSQFQLSCVELMDTLCGPESQ 821
              S S  K++ G  S    +D    + +C +++D+    E Q
Sbjct: 653  TKSASTKKSNAGDHS--VIDDLLSGRSACDQVIDSFYAAEDQ 692


>ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 714

 Score =  262 bits (669), Expect = 1e-67
 Identities = 130/258 (50%), Positives = 180/258 (69%)
 Frame = +3

Query: 3    QVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYMN 182
            +VD+ RS +W+ G KHEAGYDAFMTGC+FAQ  S LGIDFK H  S     NE+LQKY+N
Sbjct: 435  EVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDSSKPLALNEKLQKYVN 494

Query: 183  HLYVSWRNGSIIDLCTGKIIPETSVQKSKQRYPKVIFQNIVLLSGFSLNLKPAELKECLC 362
             LY+SW +  IIDL TG  + ++S++   +RYPK++F+NIV++ GFS  LK  E++EC+ 
Sbjct: 495  RLYLSWMHRDIIDLNTGNKVADSSLRSLTKRYPKIMFENIVIIWGFSSKLKANEIRECIS 554

Query: 363  KVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDGGN 542
            KVFG  S+ S+++LD T AF+QFSK ELVSDFL +K++LE+   A++VLHPLSK+L+GGN
Sbjct: 555  KVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGAISVLHPLSKLLEGGN 614

Query: 543  THAIDYETYKVICSSSISRVLFADQVKAVNVKGKTKEEKLREDAESEGAENYNSDSVTKN 722
            T   +Y+TY+ IC SS+S  LFADQ +AV +K KTK  + +    S G E+ N       
Sbjct: 615  TCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYK--VASRGKEHENPSVQDNV 672

Query: 723  DTGQRSCETANDSSQFQL 776
            +T  ++ E    ++  QL
Sbjct: 673  NTVMKNVERTKPNTIDQL 690


>ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 718

 Score =  257 bits (657), Expect = 3e-66
 Identities = 139/286 (48%), Positives = 188/286 (65%), Gaps = 12/286 (4%)
 Frame = +3

Query: 3    QVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYMN 182
            +VD  RS +WN G KHEAGYDAFMTGC+FAQ  S LGIDFK    S+    NE+LQKY+N
Sbjct: 436  EVDGSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLRDSSNQLALNEKLQKYVN 495

Query: 183  HLYVSWRNGSIIDLCTGKIIPETSVQKS-KQRYPKVIFQNIVLLSGFSLNLKPAELKECL 359
             LY+SW +G IIDL TG  + ++S   S K+RYP ++F+NIV++ GF   LK  E++EC+
Sbjct: 496  RLYLSWIHGDIIDLNTGNKVADSSPSHSLKKRYPTILFENIVIIWGFPSKLKANEVRECI 555

Query: 360  CKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDGG 539
             K FG  S+ S+++LD T AF+QFSK ELVSDFL +K++LE+ + A++VLHPLSK+L+GG
Sbjct: 556  SKAFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSDGAISVLHPLSKLLEGG 615

Query: 540  NTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTKEEKLREDAESEGAENYNSDSVTK 719
            NT A +Y+TY  IC S +S  LFADQ K V +K KT   KL E   +   E + + S+  
Sbjct: 616  NTCAANYDTYNEICGSPLSEGLFADQAKKVGIKWKT---KLTECKVASRGEEHENPSLQA 672

Query: 720  ND--TGQRSCE---------TANDSSQFQLSCVELMDTLCGPESQL 824
            ND  T  ++ E           N SS+ Q+S  E+ D+    E+ L
Sbjct: 673  NDVNTAMKNVEKTKPNTIDQLGNASSRGQVSTFEIEDSSRVAEANL 718