BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023974
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   149   2e-34
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   133   2e-29

>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/98 (77%), Positives = 84/98 (85%)
 Frame = -1

Query: 296 DRFVGNSLLSMYFKLGHDFCETRKVFDNLFEKDVISWTSMISGYVHVGKCKDSLEMFRKM 117
           DRFVGNSLL++YFKLG DF ETRKVFD LF KDVISWTSMISGYV VGK  +SLE+F KM
Sbjct: 93  DRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKM 152

Query: 116 LDFGVEPNAFTLSAVIKACSELEALRIGVCFHGVVVKR 3
           L +GVEPNAFTLSAVIKACSEL  L++G  FHGVV+ R
Sbjct: 153 LAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGR 190


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/98 (77%), Positives = 84/98 (85%)
 Frame = -1

Query: 296 DRFVGNSLLSMYFKLGHDFCETRKVFDNLFEKDVISWTSMISGYVHVGKCKDSLEMFRKM 117
           DRFVGNSLL++YFKLG DF ETRKVFD LF KDVISWTSMISGYV VGK  +SLE+F KM
Sbjct: 152 DRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKM 211

Query: 116 LDFGVEPNAFTLSAVIKACSELEALRIGVCFHGVVVKR 3
           L +GVEPNAFTLSAVIKACSEL  L++G  FHGVV+ R
Sbjct: 212 LAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGR 249


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/101 (68%), Positives = 81/101 (80%)
 Frame = -1

Query: 305 LGSDRFVGNSLLSMYFKLGHDFCETRKVFDNLFEKDVISWTSMISGYVHVGKCKDSLEMF 126
           L +DRFVGNSLL++YFKLG +  E R+VFD LF KD+ISWTSMI+GYV V K K SLE+F
Sbjct: 91  LDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELF 150

Query: 125 RKMLDFGVEPNAFTLSAVIKACSELEALRIGVCFHGVVVKR 3
            +ML  G+EPN FTLSAVIKACS L  LR+G CFHGVV+ R
Sbjct: 151 LEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVR 191


>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/101 (67%), Positives = 80/101 (79%)
 Frame = -1

Query: 305 LGSDRFVGNSLLSMYFKLGHDFCETRKVFDNLFEKDVISWTSMISGYVHVGKCKDSLEMF 126
           L +DRFVGNSLLS+YFKLG D   TR+VFD LF KDV+SW SMI+GYV  GK   ++E+F
Sbjct: 91  LETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELF 150

Query: 125 RKMLDFGVEPNAFTLSAVIKACSELEALRIGVCFHGVVVKR 3
             MLD G+EPN FTLSAVIKACSE+  L +G CFHGVVV+R
Sbjct: 151 WDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRR 191


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/101 (64%), Positives = 82/101 (81%)
 Frame = -1

Query: 305 LGSDRFVGNSLLSMYFKLGHDFCETRKVFDNLFEKDVISWTSMISGYVHVGKCKDSLEMF 126
           L +DRFVGNSLL++YFKL  DF ETR+VFD L+ +DVISWTSMI+GYV   K K +L++F
Sbjct: 82  LETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWTSMITGYVKGEKPKKALDLF 141

Query: 125 RKMLDFGVEPNAFTLSAVIKACSELEALRIGVCFHGVVVKR 3
            +MLD GV+PNAFTLSAVIKAC++L  L +G CFH V++ R
Sbjct: 142 WEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIR 182



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = -1

Query: 299 SDRFVGNSLLSMYFKLGHDFCETRKVFDNLFEKDVISWTSMISGYVHVGKCKDSLEMFRK 120
           S+  +G++L+ +Y +  ++  + R++FD L E D I WTS+IS Y        +L  F  
Sbjct: 186 SNHVIGSALIDLYGR-NYELDDARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYL 244

Query: 119 M-LDFGVEPNAFTLSAVIKACSELEALRIGVCFHGVVV 9
           M    G+ P+ FT   V+ AC  L  L+ G   H  ++
Sbjct: 245 MQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLI 282