BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023973
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ91129.1| histone deacetylase [Platanus x acerifolia]           186   1e-45
ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi...   171   7e-41
gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK...   171   7e-41
emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]   169   2e-40
emb|CBI28344.3| unnamed protein product [Vitis vinifera]              168   5e-40

>emb|CAJ91129.1| histone deacetylase [Platanus x acerifolia]
          Length = 212

 Score =  186 bits (473), Expect = 1e-45
 Identities = 89/114 (78%), Positives = 98/114 (85%)
 Frame = +2

Query: 2   PDMMAFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHSKGLLLIVQEGGYHLTYA 181
           P M   +IGQDSS+FDPNGRQCLTM+GYREIG+IVH+LAD  S G LLIVQEGGYH+TY+
Sbjct: 99  PSMTVMIIGQDSSAFDPNGRQCLTMDGYREIGQIVHKLADKFSDGRLLIVQEGGYHITYS 158

Query: 182 AYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQYWNDIGLLFQRD 343
           AYCLHATLEGAL+LP  LLSDPIAYYPEDEALA+KVVDSIKQYW D   LF  D
Sbjct: 159 AYCLHATLEGALDLPHLLLSDPIAYYPEDEALAVKVVDSIKQYWKDTVPLFGED 212


>ref|XP_003596882.1| Histone deacetylase [Medicago truncatula]
           gi|87240922|gb|ABD32780.1| Histone deacetylase
           superfamily [Medicago truncatula]
           gi|355485930|gb|AES67133.1| Histone deacetylase
           [Medicago truncatula]
          Length = 386

 Score =  171 bits (432), Expect = 7e-41
 Identities = 78/114 (68%), Positives = 95/114 (83%)
 Frame = +2

Query: 2   PDMMAFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHSKGLLLIVQEGGYHLTYA 181
           PDM+  V+GQDSS+FDPNGRQCLTMEGYREIGRIVH LA  HS G LLIVQEGGYH+TY+
Sbjct: 273 PDMIVLVVGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYS 332

Query: 182 AYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQYWNDIGLLFQRD 343
           AYCLHATLEG LNLP+ LL DP+AYYPED+  ++KV+++++ Y  D   L++ D
Sbjct: 333 AYCLHATLEGVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQNYVTDKMPLWKTD 386


>gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK47853.1| unknown
           [Medicago truncatula]
          Length = 386

 Score =  171 bits (432), Expect = 7e-41
 Identities = 78/114 (68%), Positives = 95/114 (83%)
 Frame = +2

Query: 2   PDMMAFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHSKGLLLIVQEGGYHLTYA 181
           PDM+  V+GQDSS+FDPNGRQCLTMEGYREIGRIVH LA  HS G LLIVQEGGYH+TY+
Sbjct: 273 PDMIVLVVGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYS 332

Query: 182 AYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQYWNDIGLLFQRD 343
           AYCLHATLEG LNLP+ LL DP+AYYPED+  ++KV+++++ Y  D   L++ D
Sbjct: 333 AYCLHATLEGVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQNYVTDKMPLWKTD 386


>emb|CAN79825.1| hypothetical protein VITISV_025116 [Vitis vinifera]
          Length = 379

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/105 (75%), Positives = 91/105 (86%)
 Frame = +2

Query: 2   PDMMAFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHSKGLLLIVQEGGYHLTYA 181
           P+MM  V+GQDSS+FDPNGRQCLTMEGYREIG+IV +LAD +S G LLIVQEGGY LTY+
Sbjct: 266 PEMMVLVVGQDSSAFDPNGRQCLTMEGYREIGQIVRKLADKYSDGRLLIVQEGGYQLTYS 325

Query: 182 AYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQYWN 316
           AYCLHATLEG LNLP  LLSDPIAYYPEDE +  KV+D+IK++ N
Sbjct: 326 AYCLHATLEGVLNLPSPLLSDPIAYYPEDELMTTKVIDAIKKFQN 370


>emb|CBI28344.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/105 (74%), Positives = 91/105 (86%)
 Frame = +2

Query: 2   PDMMAFVIGQDSSSFDPNGRQCLTMEGYREIGRIVHRLADTHSKGLLLIVQEGGYHLTYA 181
           P+MM  V+GQDSS+FDPNGRQCLTMEGYREIG+IV +LAD +S G LLIVQEGGY +TY+
Sbjct: 235 PEMMVLVVGQDSSAFDPNGRQCLTMEGYREIGQIVRKLADKYSDGHLLIVQEGGYQVTYS 294

Query: 182 AYCLHATLEGALNLPVSLLSDPIAYYPEDEALAIKVVDSIKQYWN 316
           AYCLHATLEG LNLP  LLSDPIAYYPEDE +  KV+D+IK++ N
Sbjct: 295 AYCLHATLEGVLNLPSPLLSDPIAYYPEDELMTTKVIDAIKKFQN 339