BLASTX nr result

ID: Coptis24_contig00023967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023967
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003704443.1| peptidoglycan-binding lysin domain-containin...    55   6e-06

>ref|YP_003704443.1| peptidoglycan-binding lysin domain-containing protein [Truepera
           radiovictrix DSM 17093] gi|297164189|gb|ADI13900.1|
           Peptidoglycan-binding lysin domain protein [Truepera
           radiovictrix DSM 17093]
          Length = 532

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
 Frame = -1

Query: 396 AQIAELEKADVES--------LRDELSNLRAVQEAEKAELDALRPQLTALTLEKTSAVNE 241
           AQ+AEL   DV          L+DE++N+RA    E A+L+AL+ +L AL  E+ +A+ E
Sbjct: 53  AQLAELLAIDVAPGVAVRLRVLQDEVANVRAALPEEAADLEALQAELEALR-EENAALQE 111

Query: 240 SIE-LKHEVEALRGQLVAANTYAERCKTSTLQAKEAYLTIRAEVEELERKLDDLQEE 73
            +E  + E+EA  G   AA    E       + +E     RAE +  E++L DL+EE
Sbjct: 112 ELEAARRELEAAAGD--AAREEQEALSAENAELREELEAARAERQAQEQQLQDLREE 166


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