BLASTX nr result

ID: Coptis24_contig00023955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023955
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530190.1| sugar transporter, putative [Ricinus communi...    72   3e-10
ref|XP_002530184.1| sugar transporter, putative [Ricinus communi...    71   6e-10
ref|XP_002308382.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-09
gb|ABW81108.1| unknown [Cleome spinosa]                                68   4e-09
ref|XP_002523539.1| sugar transporter, putative [Ricinus communi...    66   1e-08

>ref|XP_002530190.1| sugar transporter, putative [Ricinus communis]
           gi|223530309|gb|EEF32204.1| sugar transporter, putative
           [Ricinus communis]
          Length = 503

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
 Frame = -1

Query: 359 WVSSSLGGLLCGYELGQSSNFLQDDYVLHKFLHSLYMKKEHFGT-YYCGTSPFPLQAIPI 183
           W+ ++ GGL+ GY++G S      D  L KF  S+Y +K H     YC  +   LQ    
Sbjct: 34  WIFAAFGGLMFGYDIGISGGVTAMDDFLIKFFPSVYHRKLHAREDNYCKYNDQLLQLFTS 93

Query: 182 VWYIVLIFSSFGSRSICRIFGWRIVFRFLSIFILLGAFVSMTSSNVYIFILGRVFASIGI 3
             YI  IFSSF +  +C+ FG +      S+  LLGA +S  + N+ + I+GR+   +G+
Sbjct: 94  SLYIAAIFSSFAASVVCKKFGRKRTILAASLVFLLGAGLSSGAQNLPMLIIGRILLGVGV 153


>ref|XP_002530184.1| sugar transporter, putative [Ricinus communis]
           gi|223530303|gb|EEF32198.1| sugar transporter, putative
           [Ricinus communis]
          Length = 448

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
 Frame = -1

Query: 359 WVSSSLGGLLCGYELGQSSNFLQDDYVLHKFLHSLYMKKEHFGT-YYCGTSPFPLQAIPI 183
           W+ ++ GGL+ GY++G S      D  L +F  S+Y +K H     YC  +   LQ    
Sbjct: 34  WIFAAFGGLMFGYDIGISGGVTAMDDFLIQFFPSVYHRKLHAREDNYCKYNDQLLQLFTS 93

Query: 182 VWYIVLIFSSFGSRSICRIFGWRIVFRFLSIFILLGAFVSMTSSNVYIFILGRVFASIGI 3
             YI  IFSSF +  +C+ FG +      S+  LLGA +S  + N+ + I+GR+   IG+
Sbjct: 94  SLYIAAIFSSFAASVVCKKFGRKRTILAASLVFLLGAGLSSGAQNLPMLIIGRILLGIGV 153


>ref|XP_002308382.1| predicted protein [Populus trichocarpa] gi|222854358|gb|EEE91905.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
 Frame = -1

Query: 434 ISPIVVLFDSVSQMQRRGHLSLMLIWVSSSLGGLLCGYELGQSSNFLQDDYVLHKFLHSL 255
           I P  V  +   Q Q R   S+++  V +++GG L GY++G S      D  L KF H +
Sbjct: 6   IGPAGVAKERAEQYQGRVTCSVIIACVIAAVGGSLFGYDIGISGGVTSMDGFLKKFFHGV 65

Query: 254 YMKKEH-FGTYYCGTSPFPLQAIPIVWYIVLIFSSFGSRSICRIFGWRIVFRFLSIFILL 78
           Y KK+      YC  +   L A     Y+  + SS  +  I RI+G RI         L+
Sbjct: 66  YEKKQRAHENNYCKYNDQGLSAFTSSLYLAGLVSSLVASPITRIYGRRISIICGGSSFLI 125

Query: 77  GAFVSMTSSNVYIFILGRVFASIGI 3
           GA ++ TS N+ + ++GR+   +GI
Sbjct: 126 GAILNATSINLAMLLMGRIMLGVGI 150


>gb|ABW81108.1| unknown [Cleome spinosa]
          Length = 493

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = -1

Query: 356 VSSSLGGLLCGYELGQSSNFLQDDYVLHKFLHSLYMKKEH-FGTYYCGTSPFPLQAIPIV 180
           + ++ GGL+ GY++G S      D  L KF H++Y KK       YC      LQ     
Sbjct: 27  IIAACGGLMFGYDIGISGGVTSMDSFLIKFFHTVYEKKHRAHENNYCKFDNQLLQLFTSS 86

Query: 179 WYIVLIFSSFGSRSICRIFGWRIVFRFLSIFILLGAFVSMTSSNVYIFILGRVFASIGI 3
            Y+  IF+SF +  +CR  G +      S F L+GA ++  + N+Y+ I GR+    GI
Sbjct: 87  LYLAAIFASFAASIVCRKCGRKPTITLASCFFLVGAVLNFFARNLYMLIGGRILLGFGI 145


>ref|XP_002523539.1| sugar transporter, putative [Ricinus communis]
           gi|1723182|sp|Q10710.1|STA_RICCO RecName: Full=Sugar
           carrier protein A gi|169736|gb|AAA79769.1| sugar carrier
           protein [Ricinus communis] gi|223537246|gb|EEF38878.1|
           sugar transporter, putative [Ricinus communis]
          Length = 522

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
 Frame = -1

Query: 434 ISPIVVLFDSVSQMQRRGHLSLMLIWVSSSLGGLLCGYELGQSSNFLQDDYVLHKFLHSL 255
           ++P  V  +   Q Q +   ++ +  + +++GG + GY++G S   +  D  L KF  S+
Sbjct: 6   LAPAGVAKERAEQYQGKVTFAVFVACMVAAVGGSIFGYDIGISGGVISMDAFLEKFFRSV 65

Query: 254 YMKKEH-FGTYYCGTSPFPLQAIPIVWYIVLIFSSFGSRSICRIFGWRIVFRFLSIFILL 78
           Y+KK+H     YC      L A     Y+  + +S  +  I RI+G R       I  L+
Sbjct: 66  YLKKKHAHENNYCKYDDQRLAAFTSSLYLAGLAASLVAGPITRIYGRRASIISGGISFLI 125

Query: 77  GAFVSMTSSNVYIFILGRVFASIGI 3
           GA ++ T+ N+ + +LGR+   +GI
Sbjct: 126 GAALNATAINLAMLLLGRIMLGVGI 150


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