BLASTX nr result

ID: Coptis24_contig00023940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023940
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36098.3| unnamed protein product [Vitis vinifera]              379   e-102
ref|XP_002515995.1| hypothetical protein RCOM_1491960 [Ricinus c...   364   3e-98
emb|CBI38948.3| unnamed protein product [Vitis vinifera]              349   9e-94
ref|XP_002277853.2| PREDICTED: probable disease resistance prote...   321   3e-85
ref|XP_002299726.1| predicted protein [Populus trichocarpa] gi|2...   283   6e-74

>emb|CBI36098.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  379 bits (972), Expect = e-102
 Identities = 212/403 (52%), Positives = 280/403 (69%), Gaps = 37/403 (9%)
 Frame = +3

Query: 54   PNKASQELSFWIPLVEKKLSVAFQREGVVSRIQSFRNRQDL------ERDLATLGLFAFL 215
            P++ S+++ FWI L +KKL+ A +RE V S +Q+F+++            LATLG+FAFL
Sbjct: 97   PSQKSEDVEFWIGLAQKKLAKAIRRESVFSGLQTFQDKVSSVIHVQESNCLATLGIFAFL 156

Query: 216  GSRTRLFLSDMGIKDLDEQIKDFLSYLECAIVFIYPELSSLPLYQLFMEVIDEEIGWLDL 395
            G +TRLFL  MGIKDLDEQ+KDFLSYLEC  +FIYP+ SSL +YQLFMEV+ +EIGWLD 
Sbjct: 157  GRKTRLFLLGMGIKDLDEQVKDFLSYLECGSLFIYPKFSSLSVYQLFMEVVADEIGWLDF 216

Query: 396  YAAVPCIGHHERRRSKQHAIQAEQEIILCAVFSVCSDVFSGFALFSNSTQLSLDTNMVAF 575
            YAA P   + ERRRSKQHAIQAE+EIIL  VF+VC DVFSGFA FS+STQ  L+ +++AF
Sbjct: 217  YAAFPLGFNQERRRSKQHAIQAEKEIILHTVFTVCYDVFSGFAHFSSSTQQPLNADLLAF 276

Query: 576  LLQSRNLLTICLDDYLAAYYRSG---------ELLKHADRFVPQQTM----------RIQ 698
            LL+S++LLT CL+DY AAY RSG         +L K A+R    QT            + 
Sbjct: 277  LLRSQSLLTSCLEDYWAAYDRSGYDNADFSSSQLQKIAERNALDQTQSSGTKDTTSSSVT 336

Query: 699  VTPQHKS------------KLGIDVVRILKFPFSAQIKPICASIFKKYRKRLITFSCDIL 842
            +  Q K+            K+G +   +++   +A+ + +  ++ +K   +LI+ S DI 
Sbjct: 337  LDAQQKATITIICCWQASCKVGTETRTLVEAGRTAESEALHQNLLRKSSMKLISTSSDIW 396

Query: 843  LGTRLLFIDMSTATSLLLKHIRGHKVTEREMKKLKRTLVDFATVIPVTILMLLPVSAVGH 1022
            +GT+LLFID+  +  LLLK +RG +VTERE KKLK+TL D A++IPVTILMLLPVS VGH
Sbjct: 397  MGTQLLFIDIMASLELLLKQMRGRRVTERERKKLKQTLADIASLIPVTILMLLPVSVVGH 456

Query: 1023 AAMLAGIKKYIPCLIPSSYSSKRLDIAKQLDRTKMMEVKS*SN 1151
            AA+LA IKKY+P LIPS YSS+RLD+ KQL R+K MEV++ SN
Sbjct: 457  AAILAAIKKYMPSLIPSPYSSERLDVVKQLKRSKKMEVQTLSN 499


>ref|XP_002515995.1| hypothetical protein RCOM_1491960 [Ricinus communis]
            gi|223544900|gb|EEF46415.1| hypothetical protein
            RCOM_1491960 [Ricinus communis]
          Length = 740

 Score =  364 bits (934), Expect = 3e-98
 Identities = 208/416 (50%), Positives = 270/416 (64%), Gaps = 47/416 (11%)
 Frame = +3

Query: 54   PNKASQELSFWIPLVEKKLSVAFQREGVVSRIQSFRNRQDLERDLATLGLFAFLGSRTRL 233
            P    +EL FWI L ++KLSVAF +E +V   +S   +   +  LATLGLFA+LG +TRL
Sbjct: 309  PCNEIEELEFWIGLAQRKLSVAFSKETIVKDTKSSLEKVQAD-SLATLGLFAYLGRKTRL 367

Query: 234  FLSDMGIKDLDEQIKDFLSYLECAIVFIYPELSSLPLYQLFMEVIDEEIGWLDLYAAVPC 413
            FLS M +KDLDE +KDFL YLEC+I+FIYPE +S+  Y+ FMEV++EEIGWLD YA    
Sbjct: 368  FLSRMSVKDLDELVKDFLDYLECSILFIYPEFASVSAYECFMEVVNEEIGWLDFYATCSP 427

Query: 414  IGHH----------ERRRSKQHAIQAEQEIILCAVFSVCSDVFSGFALFSNSTQLSLDTN 563
            + +           ER+RSKQH IQAE+EIIL  VF+VC DVFSGFA FS STQ  LD  
Sbjct: 428  LRNQERKRSQFKKKERKRSKQHPIQAEKEIILSTVFTVCYDVFSGFAHFSRSTQQPLDAE 487

Query: 564  MVAFLLQSRNLLTICLDDYLAAYYRSGELLKHAD------------------------RF 671
             + FLL+S++LLT+CL+DY A Y RS EL K AD                        + 
Sbjct: 488  SLEFLLRSQSLLTVCLEDYRAVYDRSCELRKIADGGTSDHTLSAGTRATNKLPVALEVQQ 547

Query: 672  VPQQTMR---IQVTPQHKSKLG---------IDVVRILKFP-FSAQIKPICASIFKKYRK 812
             P + MR   +Q+  Q  +KL           +VV + + P  S     +  S+ K+Y  
Sbjct: 548  KPSELMRQGCLQIKSQEGTKLRKEQAGSSAVTEVVSVAEVPETSTNSSSLHQSLLKRYGV 607

Query: 813  RLITFSCDILLGTRLLFIDMSTATSLLLKHIRGHKVTEREMKKLKRTLVDFATVIPVTIL 992
            +L + S D+ +GT+LLF+D+     LLLK +RGHKV+ RE +KLKRTL D AT+IP+TIL
Sbjct: 608  KLASTSSDVWMGTQLLFVDIIDTMELLLKQMRGHKVSRRERRKLKRTLNDIATLIPITIL 667

Query: 993  MLLPVSAVGHAAMLAGIKKYIPCLIPSSYSSKRLDIAKQLDRTKMMEVKS*SNLRE 1160
            MLLPVSAVGHAAMLA IKKY+P LIPS YSS+RL++ KQL+R K ME++S SNL++
Sbjct: 668  MLLPVSAVGHAAMLAAIKKYVPNLIPSPYSSERLEVVKQLNRAKKMEIRSWSNLQD 723


>emb|CBI38948.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  349 bits (895), Expect = 9e-94
 Identities = 197/376 (52%), Positives = 261/376 (69%), Gaps = 26/376 (6%)
 Frame = +3

Query: 102  KKLSVAFQREGVVSRIQSFRNRQDL------ERDLATLGLFAFLGSRTRLFLSDMGIKDL 263
            KKL+ A +RE V S +Q+F+++            LATLG+ AFLG +TRLFLS MGIKDL
Sbjct: 38   KKLAKAIRRESVFSGLQTFQDKVSSVIHVQESNCLATLGILAFLGRKTRLFLSGMGIKDL 97

Query: 264  DEQIKDFLSYLECAIVFIYPELSSLPLYQLFMEVIDEEIGWLDLYAAVPCIGHHERRRSK 443
            DEQ+KDFLSYLEC  +FIYP+ SSL + QLFMEV+ +EIGW+D YAA       ERRRSK
Sbjct: 98   DEQVKDFLSYLECGSLFIYPKFSSLSMNQLFMEVVADEIGWIDFYAAFSFEFKQERRRSK 157

Query: 444  QHAIQAEQEIILCAVFSVCSDVFSGFALFSNSTQLSLDTNMVAFLLQSRNLLTICLDDYL 623
              AIQAE+EIIL  VF+VC +VFSGF  FS+STQ  L+ +++AFLL+S +LLT CL+DY 
Sbjct: 158  PRAIQAEKEIILHTVFTVCYNVFSGFVHFSSSTQQPLNADLLAFLLRSESLLTSCLEDYW 217

Query: 624  AAYYRSG---------ELLKHADR--FVPQQTMRIQVT---------PQHKSKLGIDVVR 743
            AAY RSG         +L K A+R  F P Q++  + T          Q +  +G +   
Sbjct: 218  AAYNRSGYDNADFSSSQLQKIAERNAFDPTQSIGTKSTTSSSLTLEAQQKQGMMGTETRT 277

Query: 744  ILKFPFSAQIKPICASIFKKYRKRLITFSCDILLGTRLLFIDMSTATSLLLKHIRGHKVT 923
            +++   + + + +  ++ +K   +LI+ S DI +GT+LLFID+  +  LLLK +RG ++T
Sbjct: 278  LVEAGRTVESEALHQNLLRKSSMKLISTSSDIWMGTQLLFIDIMASLELLLKQMRGRRIT 337

Query: 924  EREMKKLKRTLVDFATVIPVTILMLLPVSAVGHAAMLAGIKKYIPCLIPSSYSSKRLDIA 1103
            ERE  KLK+TLVD A++IPVTILMLLPVS VGHAA+LA IKKY+P LIPS YSS+RLD+ 
Sbjct: 338  ERERNKLKQTLVDIASLIPVTILMLLPVSVVGHAAILAAIKKYVPSLIPSPYSSERLDVV 397

Query: 1104 KQLDRTKMMEVKS*SN 1151
            KQL R+K MEV++ SN
Sbjct: 398  KQLKRSKKMEVQTLSN 413


>ref|XP_002277853.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 1639

 Score =  321 bits (822), Expect = 3e-85
 Identities = 179/380 (47%), Positives = 250/380 (65%), Gaps = 12/380 (3%)
 Frame = +3

Query: 57   NKASQELSFWIPLVEKKLSVAFQREGVVSRIQSFRNRQDLERDLATLGLFAFLGSRTRLF 236
            ++ S+++ FWI L +KKL+ A +RE V S +Q+F+++      LATLG+FAFLG +TRLF
Sbjct: 1257 SQKSEDVEFWIGLAQKKLAKAIRRESVFSGLQTFQDKVQESNCLATLGIFAFLGRKTRLF 1316

Query: 237  LSDMGIKDLDEQIKDFLSYLECAIVFIYPELSSLPLYQLFMEVIDEEIGWLDLYAAVPCI 416
             S MGIKDLDEQ+KDFLSYLEC  +FIYP+ SSL +YQLFMEV+ +EIGWLD YAA    
Sbjct: 1317 FSGMGIKDLDEQVKDFLSYLECGSLFIYPKFSSLSVYQLFMEVVADEIGWLDFYAAFSFG 1376

Query: 417  GHHERRRSKQHAIQAEQEIILCAVFSVCSDVFSGFALFSNSTQLSLDTNMVAFLLQSRNL 596
             + ERR SK HAIQAE+EIIL  VF+VC DVFSGFA FS+STQ  L+ ++   L+  +  
Sbjct: 1377 FNQERRSSKPHAIQAEKEIILHTVFTVCCDVFSGFAHFSSSTQQPLNADLAYLLVVWKTT 1436

Query: 597  LTICLDDYLAAYYRSGELLKHADR------------FVPQQTMRIQVTPQHKSKLGIDVV 740
                +D      + S +L K  +R                 ++ ++   +   K+G +  
Sbjct: 1437 GLPMIDQ--GTDFSSSQLQKITERNALDPTQSIGTKSTTSSSLTLEAQQKASCKVGTETR 1494

Query: 741  RILKFPFSAQIKPICASIFKKYRKRLITFSCDILLGTRLLFIDMSTATSLLLKHIRGHKV 920
             +++   +A+ + +   + +K   +LI+ S DI +GT+LLFID+  +  LLLK +RG ++
Sbjct: 1495 TLVEAGRTAESEALHQILLRKSSMKLISTSSDIWMGTQLLFIDIMASLELLLKQMRGRRI 1554

Query: 921  TEREMKKLKRTLVDFATVIPVTILMLLPVSAVGHAAMLAGIKKYIPCLIPSSYSSKRLDI 1100
            TERE KKLK+TL   A++IPVT      VS VGHAA+LA I KY+P LIPS YSS+RLD+
Sbjct: 1555 TERERKKLKQTLAGIASLIPVT-----TVSVVGHAAILAAINKYMPSLIPSPYSSERLDV 1609

Query: 1101 AKQLDRTKMMEVKS*SNLRE 1160
             KQL R+K MEV++ SN ++
Sbjct: 1610 VKQLKRSKKMEVQTMSNQQD 1629


>ref|XP_002299726.1| predicted protein [Populus trichocarpa] gi|222846984|gb|EEE84531.1|
            predicted protein [Populus trichocarpa]
          Length = 706

 Score =  283 bits (724), Expect = 6e-74
 Identities = 185/424 (43%), Positives = 236/424 (55%), Gaps = 55/424 (12%)
 Frame = +3

Query: 54   PNKASQELSFWIPLVEKKLSVAFQREGVVSRIQSFRNRQDLERDLATLGLFAFLGSRTRL 233
            P   ++EL  WI L ++KLS+A  +E +  R    R R D    LATLGLFA+LG +TRL
Sbjct: 313  PCNKTEELELWIGLAQQKLSLALSKE-IDLRGTGKRARAD---SLATLGLFAYLGRKTRL 368

Query: 234  FLSDMGIKDLDEQIKDFLSYLECAIVFIYPELSSLPLYQLFMEVIDEEIGWLDLYAAVPC 413
            FLS MGIKDLDE + DFLSYLEC  +F+YPEL+S+  YQ FMEV+ +EIGWLD YAA   
Sbjct: 369  FLSRMGIKDLDELVLDFLSYLECGCLFVYPELASVSTYQCFMEVVSDEIGWLDFYAACSF 428

Query: 414  IGHHERRRSKQHAIQAEQEIILCAVFSVCSDVFSGFALFSNSTQLSLDTNMVAFLLQSRN 593
            + + ER                                 S S Q  LD  ++AFLL+S++
Sbjct: 429  LSNQERE--------------------------------SRSAQQPLDAELLAFLLRSQS 456

Query: 594  LLTICLDDYLAAYYRSGELLK-----HADRFVP---------QQTMRIQVTPQHKSKLG- 728
            LLTICL+DY A Y RS E LK      +D  +P           T+  Q  P      G 
Sbjct: 457  LLTICLEDYWAVYDRSCEPLKIVEAGASDHMLPVGTKGNENLYVTLEAQQRPAELILKGC 516

Query: 729  -----IDVVRILKFPFSAQIKPIC----------------ASIFKKYRKRLIT------- 824
                 +  + + K   SAQ + I                  S+ +KY  +L++       
Sbjct: 517  LTTKSLQSINLRKASCSAQREAITHVEASSTTATRPNLPHESLLRKYSVKLVSTSSHGFI 576

Query: 825  FSC------------DILLGTRLLFIDMSTATSLLLKHIRGHKVTEREMKKLKRTLVDFA 968
            F C            D+ +GT+LL +D+S A  LLLK   GH+VT RE KKLKRTL D  
Sbjct: 577  FGCWIANIEKQIVLKDLWMGTQLLVVDISCALKLLLKQFHGHEVTIRERKKLKRTLNDII 636

Query: 969  TVIPVTILMLLPVSAVGHAAMLAGIKKYIPCLIPSSYSSKRLDIAKQLDRTKMMEVKS*S 1148
            T+IPVTILMLLPVSAVGHAA+LA IKKY+P LIPS YS++RL++ KQLDRTK MEV+S  
Sbjct: 637  TLIPVTILMLLPVSAVGHAAILAAIKKYMPFLIPSPYSAERLEVVKQLDRTKKMEVQSWI 696

Query: 1149 NLRE 1160
            NL +
Sbjct: 697  NLED 700


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