BLASTX nr result
ID: Coptis24_contig00023915
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00023915
(1326 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001064509.1| Os10g0391200 [Oryza sativa Japonica Group] g... 75 3e-11
gb|EAZ15947.1| hypothetical protein OsJ_31391 [Oryza sativa Japo... 75 3e-11
gb|EEC76835.1| hypothetical protein OsI_14984 [Oryza sativa Indi... 75 5e-11
emb|CAD39623.2| OSJNBa0040D17.2 [Oryza sativa Japonica Group] 74 8e-11
ref|NP_001052208.1| Os04g0193300 [Oryza sativa Japonica Group] g... 74 8e-11
>ref|NP_001064509.1| Os10g0391200 [Oryza sativa Japonica Group]
gi|14018043|gb|AAK52106.1|AC079936_2 Hypothetical protein
[Oryza sativa Japonica Group] gi|31431842|gb|AAP53561.1|
F-box protein interaction domain containing protein,
expressed [Oryza sativa Japonica Group]
gi|113639118|dbj|BAF26423.1| Os10g0391200 [Oryza sativa
Japonica Group] gi|125531773|gb|EAY78338.1| hypothetical
protein OsI_33424 [Oryza sativa Indica Group]
Length = 492
Score = 75.5 bits (184), Expect = 3e-11
Identities = 86/359 (23%), Positives = 144/359 (40%), Gaps = 21/359 (5%)
Frame = +1
Query: 124 PNSFTGRQLPDEIIVDIFGRLPAECIVRCGHACKPLHALMRSPAFV--YKHLNRATPVIA 297
P FTG + ++ +I RLPA ++RC C L PAF+ + H R P+I
Sbjct: 138 PRGFTGGLDDEMVLCEILVRLPARSVLRCRAVCTAWRRLTSDPAFLRAHHHRQRDLPLIY 197
Query: 298 FSYHWKSYWEEVRVHFTDDLVRTISLKSVPLEKYYLPVLFCSYNGFLLLRGSKEVIIWNP 477
F + +H +R + + P Y + S +G LLL S I NP
Sbjct: 198 FRRGGSDRVGAIDLHAAQ--LRPVVDHTWPPLGY---TVIASCDGLLLL-SSGRFYICNP 251
Query: 478 ISEQLVRVTLPLGSCLCGFFIYPQTMEYRIIH-QSRESNYFKFFVYGLMSKESKKITFSH 654
+ + + + G + + + EYR+++ + + + L S E + IT +
Sbjct: 252 ATNHWAEIPQLVDADFLGLYPHNPSGEYRVLYGEFHGEEECVYHILTLGSDEPRCITMTM 311
Query: 655 PPTTEKAP--------------ILLHGVLHWMVSDDAYQIVHGVQPDCSNSIVLFNINSE 792
T + P +L+ G LHW + D I++F+ SE
Sbjct: 312 GSETVEQPLAREFLMHARGDRSVLVRGNLHWYLR----------HRDGGCKIMVFDTASE 361
Query: 793 DFYTTPHPGVQCGLKKKHGKMELIEMEGHLCFCDSSSNENVVIWILEDYEDMIW--RKRF 966
F HP + G + L+EM+ L F + +W+L+DYE W + R
Sbjct: 362 SFQWMRHPAIP-------GWVSLLEMDSTLVFSAVECTTRIDLWVLQDYERSTWACKHRI 414
Query: 967 IVMMESLMEF--CGIQWRYGYNVNVGGFQIYNKELLVRVSKNDIILYDLQTGVCRRVGN 1137
+ M + +F C ++ G++ V + ++LVR S IL+ C R GN
Sbjct: 415 ELPMAQIRQFPECNLE-HLGWSAMVVSVE---GDVLVRCSNR--ILH------CDRKGN 461
>gb|EAZ15947.1| hypothetical protein OsJ_31391 [Oryza sativa Japonica Group]
Length = 492
Score = 75.5 bits (184), Expect = 3e-11
Identities = 86/359 (23%), Positives = 144/359 (40%), Gaps = 21/359 (5%)
Frame = +1
Query: 124 PNSFTGRQLPDEIIVDIFGRLPAECIVRCGHACKPLHALMRSPAFV--YKHLNRATPVIA 297
P FTG + ++ +I RLPA ++RC C L PAF+ + H R P+I
Sbjct: 138 PRGFTGGLDDEMVLCEILVRLPARSVLRCRAVCTAWRRLTSDPAFLRAHHHRQRDLPLIY 197
Query: 298 FSYHWKSYWEEVRVHFTDDLVRTISLKSVPLEKYYLPVLFCSYNGFLLLRGSKEVIIWNP 477
F + +H +R + + P Y + S +G LLL S I NP
Sbjct: 198 FRRGGSDRVGAIDLHAAQ--LRPVVDHTWPPLGY---TVIASCDGLLLL-SSGRFYICNP 251
Query: 478 ISEQLVRVTLPLGSCLCGFFIYPQTMEYRIIH-QSRESNYFKFFVYGLMSKESKKITFSH 654
+ + + + G + + + EYR+++ + + + L S E + IT +
Sbjct: 252 ATNHWAEIPQLVDADFLGLYPHNPSGEYRVLYGEFHGEEECVYHILTLGSDEPRCITMTM 311
Query: 655 PPTTEKAP--------------ILLHGVLHWMVSDDAYQIVHGVQPDCSNSIVLFNINSE 792
T + P +L+ G LHW + D I++F+ SE
Sbjct: 312 GSETVEQPLAREFLMHARGDRSVLVRGNLHWYLR----------HRDGGCKIMVFDTASE 361
Query: 793 DFYTTPHPGVQCGLKKKHGKMELIEMEGHLCFCDSSSNENVVIWILEDYEDMIW--RKRF 966
F HP + G + L+EM+ L F + +W+L+DYE W + R
Sbjct: 362 SFQWMRHPAIP-------GWVSLLEMDSTLVFSAVECTTRIDLWVLQDYERSTWACKHRI 414
Query: 967 IVMMESLMEF--CGIQWRYGYNVNVGGFQIYNKELLVRVSKNDIILYDLQTGVCRRVGN 1137
+ M + +F C ++ G++ V + ++LVR S IL+ C R GN
Sbjct: 415 ELPMAQIRQFPECNLE-HLGWSAMVVSVE---GDVLVRCSNR--ILH------CDRKGN 461
>gb|EEC76835.1| hypothetical protein OsI_14984 [Oryza sativa Indica Group]
Length = 378
Score = 74.7 bits (182), Expect = 5e-11
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 18/295 (6%)
Frame = +1
Query: 142 RQLPDEIIV-DIFGRLPAECIVRCGHACKPLHALMRSPAFVYKHLNRATPVIAFSYHWKS 318
R LP+EI+V +I RLP + ++RC C+ L + F+ H +R P + +K
Sbjct: 14 RGLPEEIVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTH-HRHQPSLPPVDRYKC 72
Query: 319 YWEEVRVHFTDDLVRTISLKSVPLEKY----YLPVLFCSYNGFLLLR-GSKEVIIWNPIS 483
EE + R + + P+ + Y+ S +G LLL G I NPI+
Sbjct: 73 N-EEFLLGIVSLDRRAAATRLQPVAQLDDTCYMMNADASCDGLLLLSIGGIWWFICNPIT 131
Query: 484 EQLVRVTLPLGSCLCGFFIYPQTMEYRII---HQSRESNYF------KFFVYGLMSKESK 636
Q + L G + GF+ +P T +YR++ +Q S + +VY L S +
Sbjct: 132 RQFGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPGDRNTCYVYTLGSSDVP 191
Query: 637 KITFSHPPTTEKAPILLHGVLHWMVSDDAYQIVHGVQPDCSNSIVLFNINSEDF--YTTP 810
+ + A ++LHG LHW YQ + I++F+ +E F P
Sbjct: 192 RCIGWPETSASGATVVLHGSLHW------YQ-------RSQDMILVFDTTAESFRWMRAP 238
Query: 811 HPGVQCGLKKKHGKMELIEMEGHL-CFCDSSSNENVVIWILEDYEDMIWRKRFIV 972
++C L + L +M+G L +C + V IW+L+DY+ IW ++ V
Sbjct: 239 SDRMKCTLDSGN----LFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQV 289
>emb|CAD39623.2| OSJNBa0040D17.2 [Oryza sativa Japonica Group]
Length = 429
Score = 73.9 bits (180), Expect = 8e-11
Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 18/295 (6%)
Frame = +1
Query: 142 RQLPDEIIV-DIFGRLPAECIVRCGHACKPLHALMRSPAFVYKHLNRATPVIAFSYHWKS 318
R LP+EI+V +I RLP + ++RC C+ L + F+ H +R P + +K
Sbjct: 65 RGLPEEIVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTH-HRHQPTLPLVDRYKC 123
Query: 319 YWEEVRVHFTDDLVRTISLKSVPLEKY----YLPVLFCSYNGFLLLR-GSKEVIIWNPIS 483
EE + R + + P+ + Y+ S +G LLL G I NPI+
Sbjct: 124 N-EEFLLGIVSLDRRAAAARLQPVAQLDDTCYMMSADASCDGLLLLSIGGIWWFICNPIT 182
Query: 484 EQLVRVTLPLGSCLCGFFIYPQTMEYRII---HQSRESNYF------KFFVYGLMSKESK 636
Q + L G + GF+ +P T +YR++ +Q S + +VY L S +
Sbjct: 183 RQFGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPGDRNTCYVYTLGSSDVP 242
Query: 637 KITFSHPPTTEKAPILLHGVLHWMVSDDAYQIVHGVQPDCSNSIVLFNINSEDF--YTTP 810
+ + A ++LH LHW YQ + I++F+ +E F P
Sbjct: 243 RCIGWPETSASGATVVLHCSLHW------YQ-------RSQDMILVFDTTAESFRWMRAP 289
Query: 811 HPGVQCGLKKKHGKMELIEMEGHL-CFCDSSSNENVVIWILEDYEDMIWRKRFIV 972
++C L + L +M+G L +C + V IW+L+DY+ IW ++ V
Sbjct: 290 SDRMKCTLDSGN----LFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQV 340
>ref|NP_001052208.1| Os04g0193300 [Oryza sativa Japonica Group]
gi|113563779|dbj|BAF14122.1| Os04g0193300, partial
[Oryza sativa Japonica Group]
Length = 405
Score = 73.9 bits (180), Expect = 8e-11
Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 18/295 (6%)
Frame = +1
Query: 142 RQLPDEIIV-DIFGRLPAECIVRCGHACKPLHALMRSPAFVYKHLNRATPVIAFSYHWKS 318
R LP+EI+V +I RLP + ++RC C+ L + F+ H +R P + +K
Sbjct: 41 RGLPEEIVVWEILVRLPPKPLLRCRQVCRAWRRLTSTGDFLLTH-HRHQPTLPLVDRYKC 99
Query: 319 YWEEVRVHFTDDLVRTISLKSVPLEKY----YLPVLFCSYNGFLLLR-GSKEVIIWNPIS 483
EE + R + + P+ + Y+ S +G LLL G I NPI+
Sbjct: 100 N-EEFLLGIVSLDRRAAAARLQPVAQLDDTCYMMSADASCDGLLLLSIGGIWWFICNPIT 158
Query: 484 EQLVRVTLPLGSCLCGFFIYPQTMEYRII---HQSRESNYF------KFFVYGLMSKESK 636
Q + L G + GF+ +P T +YR++ +Q S + +VY L S +
Sbjct: 159 RQFGALHLLCGFMVMGFYKHPPTGDYRLLLYRNQELMSEHLIPGDRNTCYVYTLGSSDVP 218
Query: 637 KITFSHPPTTEKAPILLHGVLHWMVSDDAYQIVHGVQPDCSNSIVLFNINSEDF--YTTP 810
+ + A ++LH LHW YQ + I++F+ +E F P
Sbjct: 219 RCIGWPETSASGATVVLHCSLHW------YQ-------RSQDMILVFDTTAESFRWMRAP 265
Query: 811 HPGVQCGLKKKHGKMELIEMEGHL-CFCDSSSNENVVIWILEDYEDMIWRKRFIV 972
++C L + L +M+G L +C + V IW+L+DY+ IW ++ V
Sbjct: 266 SDRMKCTLDSGN----LFDMDGKLGMYCSNDGCTIVDIWVLQDYKREIWSLKYQV 316