BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023895
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285679.1| PREDICTED: probable DNA primase large subuni...   267   6e-70
gb|AEL98888.1| DNA primase large subunit, partial [Silene latifo...   265   4e-69
gb|AEL98887.1| DNA primase large subunit, partial [Silene latifo...   265   4e-69
ref|XP_003579602.1| PREDICTED: probable DNA primase large subuni...   253   9e-66
ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|2...   252   3e-65

>ref|XP_002285679.1| PREDICTED: probable DNA primase large subunit [Vitis vinifera]
           gi|297741936|emb|CBI33371.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  267 bits (683), Expect = 6e-70
 Identities = 140/171 (81%), Positives = 155/171 (90%), Gaps = 1/171 (0%)
 Frame = -2

Query: 511 ASE-VTKDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPY 335
           ASE V KDIISHFVLRLVYCRT+ELRKWFL+MET LFR+RF+LET +AQR L++EF+ PY
Sbjct: 80  ASEFVNKDIISHFVLRLVYCRTEELRKWFLSMETALFRHRFRLETPEAQRVLLAEFDHPY 139

Query: 334 KAASNAERENVKDKLIQVARSIDHSKLTAADTIYFKVPFEEVPELVAGRRVFIHKGYAYV 155
           KA S+AE E+VK+KL QVARS   S L +AD IYFKVPFEEVPELVAGRRVF+ KG+AYV
Sbjct: 140 KAVSHAEFESVKEKLGQVARSFGQS-LPSADAIYFKVPFEEVPELVAGRRVFLQKGHAYV 198

Query: 154 AMNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSY 2
           AMNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEK+RLTPIVEALSTSY
Sbjct: 199 AMNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKERLTPIVEALSTSY 249


>gb|AEL98888.1| DNA primase large subunit, partial [Silene latifolia]
          Length = 450

 Score =  265 bits (676), Expect = 4e-69
 Identities = 132/167 (79%), Positives = 154/167 (92%)
 Frame = -2

Query: 502 VTKDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYKAAS 323
           + KDIISHFVLRLVYCRTDELR WFL+METTLFRYRFKL++ DAQRALM+EF LPYKA S
Sbjct: 83  INKDIISHFVLRLVYCRTDELRNWFLSMETTLFRYRFKLKSLDAQRALMAEFGLPYKAVS 142

Query: 322 NAERENVKDKLIQVARSIDHSKLTAADTIYFKVPFEEVPELVAGRRVFIHKGYAYVAMNQ 143
           NAE E+VK+KL QVARS+  S LT+ D++++KVPFEEVPELVAGRRV+IHKG+AYVA++Q
Sbjct: 143 NAEFESVKEKLTQVARSMGQS-LTSGDSVFYKVPFEEVPELVAGRRVYIHKGHAYVAVHQ 201

Query: 142 VVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSY 2
           VVSLVVTQFRS+LSKAL+LTNRKWTS I +QEK+RLTPI+EALSTSY
Sbjct: 202 VVSLVVTQFRSNLSKALILTNRKWTSVISDQEKNRLTPIIEALSTSY 248


>gb|AEL98887.1| DNA primase large subunit, partial [Silene latifolia]
          Length = 450

 Score =  265 bits (676), Expect = 4e-69
 Identities = 132/167 (79%), Positives = 154/167 (92%)
 Frame = -2

Query: 502 VTKDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYKAAS 323
           + KDIISHFVLRLVYCRTDELR WFL+METTLFRYRFKL++ DAQRALM+EF LPYKA S
Sbjct: 83  INKDIISHFVLRLVYCRTDELRNWFLSMETTLFRYRFKLKSLDAQRALMAEFGLPYKAVS 142

Query: 322 NAERENVKDKLIQVARSIDHSKLTAADTIYFKVPFEEVPELVAGRRVFIHKGYAYVAMNQ 143
           NAE E+VK+KL QVARS+  S LT+ D++++KVPFEEVPELVAGRRV+IHKG+AYVA++Q
Sbjct: 143 NAEFESVKEKLTQVARSMGQS-LTSGDSVFYKVPFEEVPELVAGRRVYIHKGHAYVAVHQ 201

Query: 142 VVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSY 2
           VVSLVVTQFRS+LSKAL+LTNRKWTS I +QEK+RLTPI+EALSTSY
Sbjct: 202 VVSLVVTQFRSNLSKALILTNRKWTSVISDQEKNRLTPIIEALSTSY 248


>ref|XP_003579602.1| PREDICTED: probable DNA primase large subunit-like [Brachypodium
           distachyon]
          Length = 462

 Score =  253 bits (647), Expect = 9e-66
 Identities = 128/170 (75%), Positives = 150/170 (88%)
 Frame = -2

Query: 511 ASEVTKDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYK 332
           A  + KDIISHFVLRLVYCRT+ELRKWFL+ME TLFRYRF+LE+ ++QR LMSEF+LPYK
Sbjct: 87  AETLNKDIISHFVLRLVYCRTEELRKWFLSMEMTLFRYRFRLESPESQRLLMSEFQLPYK 146

Query: 331 AASNAERENVKDKLIQVARSIDHSKLTAADTIYFKVPFEEVPELVAGRRVFIHKGYAYVA 152
           A  ++E E VKDKL QVARSI  S   + ++++FKVPFEEVP+LVA RRVF+ KGYAYVA
Sbjct: 147 ALPHSEFEAVKDKLSQVARSIGQS--ASVESVFFKVPFEEVPDLVASRRVFLSKGYAYVA 204

Query: 151 MNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSY 2
           M+QVVSLVVTQFRS++SKALVLTNRKWTSTI+EQEKDRLTPIVEALS +Y
Sbjct: 205 MSQVVSLVVTQFRSNISKALVLTNRKWTSTIKEQEKDRLTPIVEALSNAY 254


>ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|222841212|gb|EEE78759.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  252 bits (643), Expect = 3e-65
 Identities = 133/170 (78%), Positives = 145/170 (85%), Gaps = 1/170 (0%)
 Frame = -2

Query: 508 SEVT-KDIISHFVLRLVYCRTDELRKWFLTMETTLFRYRFKLETHDAQRALMSEFELPYK 332
           SEVT KDIISHFVLRLVYCRT+ELRKWFL+ E  LFRYRF+L + +AQR LM+EF+LPYK
Sbjct: 83  SEVTNKDIISHFVLRLVYCRTEELRKWFLSNEIALFRYRFRLLSPEAQRLLMAEFDLPYK 142

Query: 331 AASNAERENVKDKLIQVARSIDHSKLTAADTIYFKVPFEEVPELVAGRRVFIHKGYAYVA 152
             + AE E VK+KL  VARS    K TA+D I++KVPFEEVPELVAGRRVFI KGYAYVA
Sbjct: 143 PVTTAEFEGVKEKLHLVARSTGQLKPTASDAIFYKVPFEEVPELVAGRRVFICKGYAYVA 202

Query: 151 MNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTPIVEALSTSY 2
           MNQVVSLVVTQFR  LSKALVLTNRKWTSTIREQEKDRLTPIVE L TSY
Sbjct: 203 MNQVVSLVVTQFRGLLSKALVLTNRKWTSTIREQEKDRLTPIVETLCTSY 252