BLASTX nr result

ID: Coptis24_contig00023881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023881
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    70   2e-10
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    69   5e-10
emb|CCH50966.1| T4.5 [Malus x robusta]                                 67   2e-09
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    67   2e-09
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]    66   3e-09

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = +1

Query: 1   NGQGLNILNTGSSIFYPTNSYSSFTMKNILHVPQMTHNLLSVHKFVTDNNCSLTFHSAGF 180
           NG GL +LNTGS+ F      S+F +  ILH PQ   NL+S+++F  DNNC     + GF
Sbjct: 354 NGSGLQVLNTGSTTF--NFGQSNFHLNKILHCPQAATNLISINQFCLDNNCYFILTANGF 411

Query: 181 IVKDNATQRILSQ 219
           +VK+N T RIL Q
Sbjct: 412 VVKENLTGRILLQ 424


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   NGQGLNILNTGSSIFYPTNSYSSFTMKNILHVPQMTHNLLSVHKFVTDNNCSLTFHSAGF 180
           NG  LNI N G S     +   S  +KNILHVPQ+T NL+SV++  TDNN ++ F + GF
Sbjct: 333 NGNRLNISNIGHSTISSVSR--SLNLKNILHVPQLTTNLISVNRLCTDNNVTVEFFTNGF 390

Query: 181 IVKDNATQRILSQ 219
           +VKD A+++ L Q
Sbjct: 391 VVKDQASKKALLQ 403


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = +1

Query: 1   NGQGLNILNTGSSIFYPTNSYSSFTMKNILHVPQMTHNLLSVHKFVTDNNCSLTFHSAGF 180
           +G+GL I +TGS++      +++F + ++L VPQ +HNLLSV+KFV DN C LTF   GF
Sbjct: 624 DGKGLCISHTGSALI--RTKHATFRLNDVLLVPQASHNLLSVYKFVYDNWCYLTFDPFGF 681

Query: 181 IVKDNATQRILSQ 219
            VKD +T ++L Q
Sbjct: 682 YVKDLSTGKMLFQ 694


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/73 (46%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   NGQGLNILNTGSSIFYPTNSYSSFTMKNILHVPQMTHNLLSVHKFVTDNNCSLTFHSAGF 180
           NG+ L I NTG +  +  ++  SF +K + HVP ++ NL+SV KF +DNN  + FHS GF
Sbjct: 375 NGKHLTISNTGFTRLF--SNPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHSNGF 432

Query: 181 IVKDNATQRILSQ 219
            VKD  T+R+L+Q
Sbjct: 433 FVKDLHTKRVLAQ 445


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   NGQGLNILNTGS-SIFYPTNSYSSFTMKNILHVPQMTHNLLSVHKFVTDNNCSLTFHSAG 177
           +G  L ILNTG+ S F+P+ ++S   +  +LHVP ++ NL+SV KF TDN     FHS+ 
Sbjct: 379 DGNSLPILNTGTKSFFFPSKTFS---LNQVLHVPHLSTNLISVSKFCTDNAVFFEFHSSC 435

Query: 178 FIVKDNATQRIL 213
           F VKD  T++IL
Sbjct: 436 FFVKDQVTKKIL 447


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