BLASTX nr result

ID: Coptis24_contig00023875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023875
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283527.2| PREDICTED: uncharacterized protein LOC100262...   181   1e-43
ref|XP_003544506.1| PREDICTED: uncharacterized protein LOC100806...   162   1e-37
ref|XP_003556959.1| PREDICTED: uncharacterized protein LOC100797...   160   3e-37
ref|XP_002510036.1| conserved hypothetical protein [Ricinus comm...   159   8e-37
gb|ACU19129.1| unknown [Glycine max]                                  153   4e-35

>ref|XP_002283527.2| PREDICTED: uncharacterized protein LOC100262671 [Vitis vinifera]
           gi|302142146|emb|CBI19349.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  181 bits (460), Expect = 1e-43
 Identities = 99/225 (44%), Positives = 130/225 (57%)
 Frame = +3

Query: 30  MALSASAIPSISYRMKSFAGQNYPVHRYSFSGLCNHQTSLRCSKKIVVMGQFSKPRSLIM 209
           MAL AS +   S R +    +   +H  S S   N QT    S K+  M QFS+   + M
Sbjct: 1   MALPASTVTVWSSRFRINLLRPCQLHGCSLSHAYNRQTLHSHSIKLRTMAQFSEQNKVKM 60

Query: 210 YVTNFRDKLWDVFPQPLKELPWKKAENMIVQRLLVVGEKTLMWSLAMLFIFSSLSDAMLS 389
            ++  R +LW+  P  LK+ PWKKAE+ ++Q+LL++G+K L WS   LFI SS+SD +  
Sbjct: 61  QMSILRKRLWEAAPDSLKDFPWKKAEDTVLQQLLLLGQKALKWSFITLFILSSVSDVIFC 120

Query: 390 IYLNKELLIPLGLFVGCVMTNFFKEVSQDLFQSRNEGELKWHLLGISFIFVFAKVASSFV 569
           I  NKEL+IP GLFVGC+M +F KE S++LF +  +  LK  LLGI   FVF K  S+F+
Sbjct: 121 ISRNKELMIPFGLFVGCMMADFLKETSRELFPNSEKTGLKQPLLGIGCFFVFVKFMSTFL 180

Query: 570 TVGGQVFLSHVGNGGLMQVLWFWXXXXXXXXXXXXXXXXXLQETS 704
           T  GQ FL HV NGGLMQ+LW W                  QETS
Sbjct: 181 TSQGQAFLLHVANGGLMQILWLWKGLLEGRDGQSGQNFFSCQETS 225


>ref|XP_003544506.1| PREDICTED: uncharacterized protein LOC100806012 [Glycine max]
          Length = 227

 Score =  162 bits (409), Expect = 1e-37
 Identities = 89/201 (44%), Positives = 127/201 (63%), Gaps = 2/201 (0%)
 Frame = +3

Query: 36  LSASAIPSISY-RMKSFAGQNYPVHRYSFSGLCNHQTSLRCSKKIVV-MGQFSKPRSLIM 209
           L + A+PS    R+K F  Q    HR +   L  HQT    ++ I V M   ++P  + M
Sbjct: 4   LPSLAVPSTPISRVKLFQCQPCQFHRCTELYL-PHQTYYTRTRSIKVSMADHNEPSEVKM 62

Query: 210 YVTNFRDKLWDVFPQPLKELPWKKAENMIVQRLLVVGEKTLMWSLAMLFIFSSLSDAMLS 389
            +   R+KL +  P  ++E PWKKAE +++ RLL + ++T+ WSL + FIFSS+SD + +
Sbjct: 63  QIGIMREKLKEAMPVSVQEFPWKKAEQILLDRLLNLAQETVKWSLVLFFIFSSVSDVVYT 122

Query: 390 IYLNKELLIPLGLFVGCVMTNFFKEVSQDLFQSRNEGELKWHLLGISFIFVFAKVASSFV 569
             +N+EL+IP+GLFVG ++  F KE+SQDLF    E +LKWHLLG+  IFVFAK  S++ 
Sbjct: 123 FSINRELVIPIGLFVGLLVAGFLKEISQDLFHRPEEKDLKWHLLGMYCIFVFAKFMSTWF 182

Query: 570 TVGGQVFLSHVGNGGLMQVLW 632
               +VFL HV NGGL+Q LW
Sbjct: 183 ATLPRVFLLHVANGGLIQALW 203


>ref|XP_003556959.1| PREDICTED: uncharacterized protein LOC100797104 [Glycine max]
          Length = 227

 Score =  160 bits (405), Expect = 3e-37
 Identities = 86/200 (43%), Positives = 125/200 (62%), Gaps = 1/200 (0%)
 Frame = +3

Query: 36  LSASAIPSISY-RMKSFAGQNYPVHRYSFSGLCNHQTSLRCSKKIVVMGQFSKPRSLIMY 212
           L + A+PS    R+K F  Q    HR +   L +     R +   V M   ++P  + M 
Sbjct: 4   LPSLAVPSTPISRVKLFQCQPCQFHRCTELYLPHQTYYTRTTSIKVSMADQNEPSEVNMQ 63

Query: 213 VTNFRDKLWDVFPQPLKELPWKKAENMIVQRLLVVGEKTLMWSLAMLFIFSSLSDAMLSI 392
           +   R+KL +  P  ++E PWKKAE++++ RLL + ++T+ WSL + FIFSS+SD + + 
Sbjct: 64  IGIMREKLKETLPVSVQEFPWKKAEHILLDRLLNLAQETVKWSLVLFFIFSSVSDVVYTF 123

Query: 393 YLNKELLIPLGLFVGCVMTNFFKEVSQDLFQSRNEGELKWHLLGISFIFVFAKVASSFVT 572
            +N+EL+IP+GLFVGC+  +F KE+SQ+LF    E +LK HLLG+  +FVF K  S++  
Sbjct: 124 SINRELVIPVGLFVGCLAADFLKEISQELFHKSEEKDLKRHLLGMYCLFVFVKFMSTWFA 183

Query: 573 VGGQVFLSHVGNGGLMQVLW 632
              QVFL HV NGGLMQVLW
Sbjct: 184 ALPQVFLLHVANGGLMQVLW 203


>ref|XP_002510036.1| conserved hypothetical protein [Ricinus communis]
           gi|223550737|gb|EEF52223.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  159 bits (402), Expect = 8e-37
 Identities = 70/153 (45%), Positives = 109/153 (71%)
 Frame = +3

Query: 180 QFSKPRSLIMYVTNFRDKLWDVFPQPLKELPWKKAENMIVQRLLVVGEKTLMWSLAMLFI 359
           QF +P  + + +++ ++KLW+  P P+K+ PW++A +M+++RLL +G+K L WSLA++F+
Sbjct: 37  QFGEPNKVRLQLSSAKEKLWEATPNPVKKFPWREAGDMLLKRLLFIGQKVLKWSLAVIFV 96

Query: 360 FSSLSDAMLSIYLNKELLIPLGLFVGCVMTNFFKEVSQDLFQSRNEGELKWHLLGISFIF 539
            S +SD + SI  N+EL+IP+GL VGC+MT+F KE  Q+LFQ+  + EL + L+ I   F
Sbjct: 97  LSCISDIIFSISRNQELMIPIGLLVGCLMTDFLKETLQELFQASEDKELNFPLVIICCFF 156

Query: 540 VFAKVASSFVTVGGQVFLSHVGNGGLMQVLWFW 638
           VF KV S++     Q+ LSHV NGGL+Q +W W
Sbjct: 157 VFVKVMSAYFISRPQMLLSHVANGGLLQAVWLW 189


>gb|ACU19129.1| unknown [Glycine max]
          Length = 225

 Score =  153 bits (387), Expect = 4e-35
 Identities = 82/199 (41%), Positives = 121/199 (60%)
 Frame = +3

Query: 36  LSASAIPSISYRMKSFAGQNYPVHRYSFSGLCNHQTSLRCSKKIVVMGQFSKPRSLIMYV 215
           L + A+PS     + F  Q    HR +   L +     R +   V M   ++P  + M +
Sbjct: 4   LPSLAVPSTPIS-RLFQCQPCQFHRCTELYLPHQTYYTRTTSIKVSMADQNEPSEVNMQI 62

Query: 216 TNFRDKLWDVFPQPLKELPWKKAENMIVQRLLVVGEKTLMWSLAMLFIFSSLSDAMLSIY 395
              R+KL +  P  ++E PWKKAE++++ RLL + ++T+ WSL + FIFSS+SD + +  
Sbjct: 63  GIMREKLKETLPVSVQEFPWKKAEHILLDRLLNLAQETVKWSLVLFFIFSSVSDVVYTFS 122

Query: 396 LNKELLIPLGLFVGCVMTNFFKEVSQDLFQSRNEGELKWHLLGISFIFVFAKVASSFVTV 575
           +N+EL+IP+GLFVGC+  +F KE+SQ+LF    E +LK H LG+  +FVF K  S++   
Sbjct: 123 INRELVIPVGLFVGCLAADFLKEISQELFHKFEEKDLKRHFLGVYCLFVFVKFMSTWFAA 182

Query: 576 GGQVFLSHVGNGGLMQVLW 632
             QVF  HV NGGLMQVLW
Sbjct: 183 LPQVFFLHVANGGLMQVLW 201


Top