BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023867
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm...   123   1e-25
ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23...   101   4e-19
ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23...    96   2e-17
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit...    93   1e-16
ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-15

>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
            gi|223538985|gb|EEF40582.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 413

 Score =  123 bits (308), Expect = 1e-25
 Identities = 109/421 (25%), Positives = 183/421 (43%), Gaps = 37/421 (8%)
 Frame = -3

Query: 1246 SSSVMEENLVMMEC--RKSFEETICDKRSNLVVPYLEDDIIFEIFRGICACKINKLRYDC 1073
            + SV  +NL ++     ++  + + D+++   VPY   D I  I   +    +   R+ C
Sbjct: 2    AKSVGNKNLGLLRTVEERALSKKVEDEQNKQHVPYFHKDCISNILIRLPLQSLQSSRFVC 61

Query: 1072 KQWYNLFSSSYFIDGHLRQSKLGLMAI---------PTSLP-------------LHRKWG 959
            K WY++ +SS FID HLR+S+  L+ +          TS P             L    G
Sbjct: 62   KLWYSIINSSIFIDAHLRRSESVLIYVKPVPNKRYSATSKPPEESNNFSVEASFLQSNSG 121

Query: 958  PMHVDP----------DFVHVMNEKVSIRSLSITRKNFVRGTCNGLVLLEDICATGNLSI 809
             +  +P           FV      + I   ++     +R TCNGL+LL++    G L +
Sbjct: 122  SIFAEPIMNSAPKFCIQFVEFKEGNMKIGEYNVNCLGNIRATCNGLILLDNKLKKGGLIV 181

Query: 808  ANPATGQLLKLPPCTQRSKKVDIVRGITYFDCSGEYKIISVVIHKTGWFGCEMLALGSSA 629
             NP T +L+ LP  T  S + D   G    D +GEYK++ +   + G+  CE L L +  
Sbjct: 182  MNPVTRKLIALPLGTIYSPQ-DESYGFALSDTTGEYKVVHLFRDELGYVSCETLNLRARF 240

Query: 628  WKWVASPFECVGKWSLSERGCVSIKGVFHIMLFSIRGSVHTLSFDTVEEKFYKSEFQNNC 449
            WK V  P   + +W       V+  G  H  +  +  + + +S +   EKF+      +C
Sbjct: 241  WKEVNGPSFGLFRWFGYRP--VAALGALH-WIPQVDHNDYLVSMEVDNEKFHSVPLPKSC 297

Query: 448  LLRVEVLHEIEGCPSVVVPNFWVRGCQFDIWVLKDLCTGEWDKRYTISLTIYRDKFSGKL 269
             +   ++ E+ G    V           DIW L+ L    W K+Y+I+         G +
Sbjct: 298  RIHDRII-EMGGLLCFVTH----EELNIDIWNLRSLSGDVWTKQYSIT--------RGSI 344

Query: 268  DFPYIVGVLKNSRFLILKRDSLWGKYYSYDVQRHQLKFLNLDER---LGYVFRPHVESLV 98
                 +  L+    LI KRD   G +YSYD +  +++ + +D++       + PHV SL+
Sbjct: 345  IDMVPICSLRIGGELIFKRDE-DGSFYSYDCRLKEMRKVEMDKKCLPFHGTYLPHVNSLI 403

Query: 97   S 95
            S
Sbjct: 404  S 404


>ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
            sativus]
          Length = 401

 Score =  101 bits (252), Expect = 4e-19
 Identities = 97/400 (24%), Positives = 163/400 (40%), Gaps = 40/400 (10%)
 Frame = -3

Query: 1174 KRSNLVVPYLEDDIIFEIFRGICACKINKLRYDCKQWYNLFSSSYFIDGHLRQSKLGLM- 998
            K+   ++PY+ +D +  I   +    +++  + CK W+N+  S  F++ H  +S+  L+ 
Sbjct: 19   KQQESLIPYVHEDCVSNILIRLPLDSLHRSMFVCKHWFNIICSPTFVETHFHRSESVLIF 78

Query: 997  AIPT-----------SLPLHRKWGPMHVDPDFVHVMNEKVSIRSLSITRKNFV------- 872
              PT           SLP   K   + ++  ++          +L  T K F+       
Sbjct: 79   TAPTRYEETSHHLTPSLPHSGKSNTLSIEAKYMQSSESLSLFHNLEPTSKRFIQFLEFQD 138

Query: 871  ----------------RGTCNGLVLLEDICATGNLSIANPATGQLLKLPPCTQRSKKVDI 740
                            R TCNGL+LL++    G L + NP T +L  LPP T  S   + 
Sbjct: 139  GISNVGEYSLSCFGQIRATCNGLILLDNKLKIGGLIVINPVTRKLTALPPGTLNSSHNES 198

Query: 739  VRGITYFDCSGEYKIISVVIHKTGWFGCEMLALGSSAWKWV-ASPFECVGKWSLSERGCV 563
              G  Y + SG YK++ +      +  CE+  LG+  W+ V   PF   G +       V
Sbjct: 199  Y-GFAYDNISGRYKVVHLFRDALMYISCEIFILGTENWRAVDGPPFGLFGWFGYKP---V 254

Query: 562  SIKGVFHIMLFSIRGSVHTLSFDTVEEKFYKSEFQNNCLLRVEVLHEIEGCPSVVVPNFW 383
               G  H  +  +  S    S +   EKF      N+C  R + + EI    S V     
Sbjct: 255  EAIGALH-WIPQVNHSDCIASLEIENEKFQTIPLPNSC-NRYDGIVEIGSSLSYVTH--- 309

Query: 382  VRGCQFDIWVLKDLCTGEWDKRYTISLTIYRDKFSGKLDFPYIVGVLKNSRFLILKRDSL 203
                  DIW+LK L    W K+++I++         ++D   ++        +   +D  
Sbjct: 310  -METHTDIWILKGLSGEIWIKQHSINI-------GCRMDMVPLLSFRIRGDLIFKSKD-- 359

Query: 202  WGKYYSYDVQRHQLKFLNLDERL----GYVFRPHVESLVS 95
             G +Y YD +   +  +   +RL     ++F PHV S+VS
Sbjct: 360  -GFFYIYDFELRSITKVEDKKRLRVSSDFLF-PHVNSMVS 397


>ref|XP_004171022.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
            sativus]
          Length = 390

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 82/327 (25%), Positives = 134/327 (40%), Gaps = 36/327 (11%)
 Frame = -3

Query: 1174 KRSNLVVPYLEDDIIFEIFRGICACKINKLRYDCKQWYNLFSSSYFIDGHLRQSKLGLM- 998
            K+   ++PY+ +D +  I   +    +++  + CK W+N+  S  F++ H  +S+  L+ 
Sbjct: 19   KQQESLIPYVHEDCVSNILIRLPLDSLHRSMFVCKHWFNIICSPTFVETHFHRSESVLIF 78

Query: 997  AIPT-----------SLPLHRKWGPMHVDPDFVHVMNEKVSIRSLSITRKNFV------- 872
              PT           SLP   K   + ++  ++          +L  T K F+       
Sbjct: 79   TAPTRYEETSHHLTPSLPHSGKSNTLSIEAKYMQSSESLSLFHNLEPTSKRFIQFLEFQD 138

Query: 871  ----------------RGTCNGLVLLEDICATGNLSIANPATGQLLKLPPCTQRSKKVDI 740
                            R TCNGL+LL++    G L + NP T +L  LPP T  S   + 
Sbjct: 139  GISNVGEYSLSCFGQIRATCNGLILLDNKLKIGGLIVINPVTRKLTALPPGTLNSSHNES 198

Query: 739  VRGITYFDCSGEYKIISVVIHKTGWFGCEMLALGSSAWKWV-ASPFECVGKWSLSERGCV 563
              G  Y + SG YK++ +      +  CE+  LG+  W+ V   PF   G +       V
Sbjct: 199  Y-GFAYDNVSGRYKVVHLFRDALMYISCEIFILGTENWRAVDGPPFGLFGWFGYKP---V 254

Query: 562  SIKGVFHIMLFSIRGSVHTLSFDTVEEKFYKSEFQNNCLLRVEVLHEIEGCPSVVVPNFW 383
               G  H  +  +  S    S +   EKF      N+C  R + + EI    S V     
Sbjct: 255  EAIGALH-WIPQVNHSDCIASLEIENEKFQTIPLPNSC-NRYDGIVEIGSSLSYVTH--- 309

Query: 382  VRGCQFDIWVLKDLCTGEWDKRYTISL 302
                  DIW+LK L    W K+++I++
Sbjct: 310  -METHTDIWILKGLSGEIWIKQHSINI 335


>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
          Length = 417

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 95/403 (23%), Positives = 159/403 (39%), Gaps = 37/403 (9%)
 Frame = -3

Query: 1192 EETICDKRSNLVVPYLEDDIIFEIFRGICACKINKLRYDCKQWYNLFSSSYFIDGHLRQS 1013
            E  +  K     VPYL  D    I   +    +   R  CK WY L +S  FID HLR+S
Sbjct: 19   ERALSKKVEEKQVPYLPKDCFSNILVRLPIESLPSSRLVCKPWYKLINSPIFIDAHLRRS 78

Query: 1012 KLGLMAIPTSLPLHRKWGPMH-------------------------------VDP----- 941
            ++ L+ +   +       P                                 +DP     
Sbjct: 79   EVVLIFLTPIVKQETYLYPFSTRSISQEKPNTFSVEVNLLQLESTPLFHQPVIDPRRKSY 138

Query: 940  -DFVHVMNEKVSIRSLSITRKNFVRGTCNGLVLLEDICATGNLSIANPATGQLLKLPPCT 764
              F+ + + K  I   +I+    +  + NGL+LLE+    G L + NP T +L +LP  T
Sbjct: 139  IQFMEIKDGKSKIGEFNISCMGEITASFNGLILLENKLKRGRLVVMNPVTRKLTELPLGT 198

Query: 763  QRSKKVDIVRGITYFDCSGEYKIISVVIHKTGWFGCEMLALGSSAWKWVASPFECVGKWS 584
              S+      G      + EYK++ +   +  +  CE+L +G+  W+ V  P   +  W 
Sbjct: 199  -LSQPHQESYGFALSYSTSEYKVVHLFHDELRYINCEILNVGTRTWRPVNGPSFGLISWF 257

Query: 583  LSERGCVSIKGVFHIMLFSIRGSVHTLSFDTVEEKFYKSEFQNNCLLRVEVLHEIEGCPS 404
              +   VS  G  H  +  I  + + +S     EKF+  +   +      +   +E   S
Sbjct: 258  GYKP--VSAMGALH-WVPHINDNDYIVSLHLENEKFHTVQLPKSYRTHDGI---VEMGGS 311

Query: 403  VVVPNFWVRGCQFDIWVLKDLCTGEWDKRYTISLTIYRDKFSGKLDFPYIVGVLKNSRFL 224
            +   +      Q  IW LK L    W K++ I+     D           +  ++ +  +
Sbjct: 312  LCFVSHDEEMLQIGIWSLKGLSGEGWTKQHCITTGCILDMVP--------LFSMRTTEEM 363

Query: 223  ILKRDSLWGKYYSYDVQRHQLKFLNLDERLGYVFRPHVESLVS 95
            + KRD   G  Y+YD Q   ++ ++++  L   + PHV SLVS
Sbjct: 364  VFKRDE-DGSLYAYDFQLQVMRKIDMETPLSDCYLPHVNSLVS 405


>ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|222835655|gb|EEE74090.1|
            predicted protein [Populus trichocarpa]
          Length = 426

 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 96/400 (24%), Positives = 162/400 (40%), Gaps = 47/400 (11%)
 Frame = -3

Query: 1153 PYLEDDIIFEIFRGICACKINKLRYDCKQWYNLFSSSYFIDGHLRQSKLGLMAIP----- 989
            PY   D I  I   +    +   R+ CK WYN+ +S  FID H R+S+  L+ +      
Sbjct: 38   PYFHKDCISNILIWLPLESLPSSRFVCKPWYNIINSRTFIDSHFRRSESVLIFLKSVSRG 97

Query: 988  -------------TSLPLHRK-------------------WGPMHVDPD-------FVHV 926
                         TS+P  +                    +GP HV          F+  
Sbjct: 98   RSYPYSRPDPFSMTSMPEEQGNTFSVEVALLQSNLKTVPIFGP-HVTGSSSKFFIQFMEF 156

Query: 925  MNEKVSIRSLSITRKNFVRGTCNGLVLLEDICATGNLSIANPATGQLLKLPPCTQRSKKV 746
               K+ +   +++    +R TCNGL+LL++    G L + NP T +L+ LP  T  +   
Sbjct: 157  KEGKIKVGKYNVSCLGNIRATCNGLILLDNHVKKG-LIVMNPVTRKLITLPLGTLCNYHK 215

Query: 745  DIVRGITYFDCSGEYKIISVVIHKTGWFGCEMLALGSSAWKWVASPFECVGKWSLSERGC 566
            +   G      +G+YK++ +   +  +  CE L L + +W+ V  P    G ++      
Sbjct: 216  ESY-GFALNHVTGDYKLVHLFRDEFEYVTCETLDLATRSWRAVNGP--SFGLFNWFGHAP 272

Query: 565  VSIKGVFHIMLFSIRGSVHTLSFDTVEEKFYKSEFQNNCLLRVEVLHEIEGCPSVVVPNF 386
            VS  G  H  +  +  S   +S +   E+F+     + C     V+ E+ G    V    
Sbjct: 273  VSAIGALH-WIPQLDNSDFIVSMEVENERFHCIPLPHRCTTHDRVM-EMGGLLCFVTH-- 328

Query: 385  WVRGCQFDIWVLKDLCTGEWDKRYTISLTIYRDKFSGKLDFPYIVGVLKNSRFLILKRDS 206
                   DIW LK +  G W K+Y+I+         G L     +  L+ S  +I +R  
Sbjct: 329  --EDLNIDIWNLKSVPEGIWTKQYSIT--------KGSLIDMVPLFSLRISGDVIFRRKE 378

Query: 205  LWGKYYSYDVQRHQLKFLNLDERLGY---VFRPHVESLVS 95
              G +++YD +   ++   +D+        + PHV SL+S
Sbjct: 379  -DGSFHAYDFKSEVMREFEMDKERNLSSGAYLPHVNSLLS 417