BLASTX nr result

ID: Coptis24_contig00023863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023863
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267467.1| PREDICTED: uncharacterized protein LOC100241...   105   5e-21
ref|XP_003618009.1| hypothetical protein MTR_5g097970 [Medicago ...   104   6e-21
ref|NP_001238653.1| uncharacterized protein LOC100306425 [Glycin...    99   3e-19
ref|XP_003544055.1| PREDICTED: uncharacterized protein LOC100809...    96   4e-18
ref|XP_002321169.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17

>ref|XP_002267467.1| PREDICTED: uncharacterized protein LOC100241395 [Vitis vinifera]
           gi|297739146|emb|CBI28797.3| unnamed protein product
           [Vitis vinifera]
          Length = 164

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/97 (55%), Positives = 65/97 (67%)
 Frame = +3

Query: 27  IYVAAVPLRAIKGPAQLMMSAAHSLNLWDFQHFMVLIRPTSPPQSQVHFSLVYTICTSGT 206
           +YVA +PLRA KGP QL+MSAA+SLNLWD QHFMV+I+P+SP  SQ              
Sbjct: 17  VYVATMPLRATKGPPQLLMSAAYSLNLWDLQHFMVIIKPSSPTLSQA------------- 63

Query: 207 SXXXXXXXXXFVYDFQPQDPEDLYVALAALSGKGVAG 317
                     FVYDFQP+DPE++YVALAALSG+ V G
Sbjct: 64  ----------FVYDFQPKDPENVYVALAALSGRAVQG 90


>ref|XP_003618009.1| hypothetical protein MTR_5g097970 [Medicago truncatula]
           gi|355519344|gb|AET00968.1| hypothetical protein
           MTR_5g097970 [Medicago truncatula]
          Length = 195

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 10/107 (9%)
 Frame = +3

Query: 27  IYVAAVPLRAIKGPAQLMMSAAHSLNLWDFQHFMVLIRPTSPPQSQVHFSLVYTICTSGT 206
           +YVAA+PLRA KGP QL+MSAA+SLN+WD QHFMV+I+P+SP Q    FS V +   SG 
Sbjct: 18  VYVAAMPLRASKGPPQLLMSAAYSLNIWDLQHFMVIIKPSSPSQ----FSRVESEGYSGR 73

Query: 207 SXXXXXXXXXF----------VYDFQPQDPEDLYVALAALSGKGVAG 317
           S         +          V+DFQP+DPED+YVALA LSG+ V G
Sbjct: 74  SRPRDVENVLYFIASIYFQVLVFDFQPKDPEDIYVALAVLSGRAVPG 120


>ref|NP_001238653.1| uncharacterized protein LOC100306425 [Glycine max]
           gi|255628499|gb|ACU14594.1| unknown [Glycine max]
          Length = 163

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/97 (53%), Positives = 63/97 (64%)
 Frame = +3

Query: 27  IYVAAVPLRAIKGPAQLMMSAAHSLNLWDFQHFMVLIRPTSPPQSQVHFSLVYTICTSGT 206
           +YVAA+PLRA KGP QL+MSAA+SLNLWDFQHFMV+I+P+S  Q                
Sbjct: 17  VYVAAMPLRATKGPPQLLMSAAYSLNLWDFQHFMVIIKPSSLSQ---------------- 60

Query: 207 SXXXXXXXXXFVYDFQPQDPEDLYVALAALSGKGVAG 317
                      V+DFQP+DPED+YVALAAL G+ V G
Sbjct: 61  ---------VLVFDFQPKDPEDIYVALAALYGRAVPG 88


>ref|XP_003544055.1| PREDICTED: uncharacterized protein LOC100809731 [Glycine max]
          Length = 156

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/97 (50%), Positives = 61/97 (62%)
 Frame = +3

Query: 27  IYVAAVPLRAIKGPAQLMMSAAHSLNLWDFQHFMVLIRPTSPPQSQVHFSLVYTICTSGT 206
           +Y AA+PLRA K P QL+MSAA+SLN WDFQHFMV+I+P+SP Q                
Sbjct: 17  VYAAAMPLRATKRPPQLLMSAAYSLNFWDFQHFMVIIKPSSPSQ---------------- 60

Query: 207 SXXXXXXXXXFVYDFQPQDPEDLYVALAALSGKGVAG 317
                       +DFQP+DPED+YVALAAL+G+ V G
Sbjct: 61  ---------VLGFDFQPKDPEDIYVALAALNGRAVPG 88


>ref|XP_002321169.1| predicted protein [Populus trichocarpa] gi|222861942|gb|EEE99484.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/97 (48%), Positives = 58/97 (59%)
 Frame = +3

Query: 27  IYVAAVPLRAIKGPAQLMMSAAHSLNLWDFQHFMVLIRPTSPPQSQVHFSLVYTICTSGT 206
           +YVAA PLRA KGPAQL+MS  +SLNLWD QHF+V+I+P  P   Q              
Sbjct: 18  VYVAATPLRATKGPAQLLMSTTYSLNLWDLQHFVVIIKPNLPVPPQ-------------- 63

Query: 207 SXXXXXXXXXFVYDFQPQDPEDLYVALAALSGKGVAG 317
                      V+DFQP+DPE++Y ALA LSG+ V G
Sbjct: 64  ------NSQVIVFDFQPKDPENIYTALAVLSGRAVPG 94


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