BLASTX nr result

ID: Coptis24_contig00023850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023850
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus commu...    87   2e-15
ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]         83   2e-14
emb|CBI36904.3| unnamed protein product [Vitis vinifera]               83   2e-14
emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]    83   2e-14
ref|XP_003536876.1| PREDICTED: kinesin-4-like [Glycine max]            81   1e-13

>ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus communis]
            gi|223537697|gb|EEF39320.1| kinesin heavy chain, putative
            [Ricinus communis]
          Length = 1012

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 61/141 (43%), Positives = 82/141 (58%), Gaps = 9/141 (6%)
 Frame = -1

Query: 398  ASLRGALAKMEGETEHLQPSTPRSSSPEKLRMKFDGSSPRHSNRQVGGESPGGHSIRTKP 219
            ASL+ ALA+ EGE E  Q S   S + E+ R K + SSP +SN+++G ++   +S R   
Sbjct: 743  ASLKAALARKEGEPEFAQHSA--SDNSERYRRKENESSPFNSNQRLG-DANDANSFRQPM 799

Query: 218  MNIQNIP-----KLIPKTTSFDLRELSTGSPPWPPTKSTGLKVY---EKELGTGDWVDKV 63
             ++ NI       L PK  SFDL EL   SPPWPP  S   K Y   EKE+G+G+WVDKV
Sbjct: 800  GDVGNIEVHTSSTLRPKRQSFDLDELLANSPPWPPVISPN-KNYGDDEKEMGSGEWVDKV 858

Query: 62   IV-KEDVINGDDTLSGHCERD 3
            +V K+D +N  +   G  E D
Sbjct: 859  MVNKQDAVNRAEDPLGCWEAD 879


>ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1011

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 54/127 (42%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
 Frame = -1

Query: 398  ASLRGALAKMEGETEHLQPSTPRSSSPEKLRMKFDGSSPRHSNRQVGGESPGGHSIRTKP 219
            ASL+ ALA+ EGE E +Q S   S+S E+ R K    SP HSN+Q G      +S R   
Sbjct: 742  ASLKAALARKEGEPEDMQHSF--SNSSERYRTKASDLSPFHSNKQAGDMLDDQNSCRQPM 799

Query: 218  MNIQNIPK-----LIPKTTSFDLRELSTGSPPWPPTKSTGLKVYE--KELGTGDWVDKVI 60
             ++ NI       +  K  SFDL EL   SPPWPP  S+     E  K++G+G WVDKV+
Sbjct: 800  GDVGNIEARGNSMMRQKKQSFDLEELLGNSPPWPPVSSSVQNYVEDDKDMGSGQWVDKVM 859

Query: 59   V-KEDVI 42
            V K+D +
Sbjct: 860  VNKQDAV 866


>emb|CBI36904.3| unnamed protein product [Vitis vinifera]
          Length = 1017

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 54/127 (42%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
 Frame = -1

Query: 398  ASLRGALAKMEGETEHLQPSTPRSSSPEKLRMKFDGSSPRHSNRQVGGESPGGHSIRTKP 219
            ASL+ ALA+ EGE E +Q S   S+S E+ R K    SP HSN+Q G      +S R   
Sbjct: 748  ASLKAALARKEGEPEDMQHSF--SNSSERYRTKASDLSPFHSNKQAGDMLDDQNSCRQPM 805

Query: 218  MNIQNIPK-----LIPKTTSFDLRELSTGSPPWPPTKSTGLKVYE--KELGTGDWVDKVI 60
             ++ NI       +  K  SFDL EL   SPPWPP  S+     E  K++G+G WVDKV+
Sbjct: 806  GDVGNIEARGNSMMRQKKQSFDLEELLGNSPPWPPVSSSVQNYVEDDKDMGSGQWVDKVM 865

Query: 59   V-KEDVI 42
            V K+D +
Sbjct: 866  VNKQDAV 872


>emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]
          Length = 1172

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 54/127 (42%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
 Frame = -1

Query: 398  ASLRGALAKMEGETEHLQPSTPRSSSPEKLRMKFDGSSPRHSNRQVGGESPGGHSIRTKP 219
            ASL+ ALA+ EGE E +Q S   S+S E+ R K    SP HSN+Q G      +S R   
Sbjct: 760  ASLKAALARKEGEPEDMQHSF--SNSSERXRTKASDLSPFHSNKQAGDMLDDQNSCRQPM 817

Query: 218  MNIQNIPK-----LIPKTTSFDLRELSTGSPPWPPTKSTGLKVYE--KELGTGDWVDKVI 60
             ++ NI       +  K  SFDL EL   SPPWPP  S+     E  K++G+G WVDKV+
Sbjct: 818  GDVGNIEARXNSMMRQKKQSFDLEELLGNSPPWPPVSSSVQNYVEDDKDMGSGQWVDKVM 877

Query: 59   V-KEDVI 42
            V K+D +
Sbjct: 878  VNKQDAV 884


>ref|XP_003536876.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1010

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 55/140 (39%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
 Frame = -1

Query: 398  ASLRGALAKMEGETEHLQPSTPRSSSPEKLRMKFDGSSPRHSNRQVGGESPGGHSIRTKP 219
            ASL+ ALA+ EGE+EH       S S EK R +    SP H+N++  G        R   
Sbjct: 745  ASLKAALARKEGESEH-----SLSGSSEKYRTRAGEVSPYHANQR--GADIVSLGCRQPM 797

Query: 218  MNIQNIP-----KLIPKTTSFDLRELSTGSPPWPPTKSTGLKV--YEKELGTGDWVDKVI 60
            +++ NI       L  KT S+D  E+ST SPPWPP  + GL     ++E G+G+WVDKV+
Sbjct: 798  LDVGNIELHSNTPLRQKTQSYDFDEMSTNSPPWPPLNNLGLNYGDDDRETGSGEWVDKVM 857

Query: 59   V-KEDVINGDDTLSGHCERD 3
            V K D  N  + + G  E D
Sbjct: 858  VNKLDATNKTENILGCWEAD 877


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