BLASTX nr result

ID: Coptis24_contig00023848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023848
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...    58   8e-07

>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
           gi|223543465|gb|EEF44996.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 43/138 (31%), Positives = 58/138 (42%)
 Frame = -2

Query: 486 KTVGVPFMDINSMSEILILGSCNGLICLSSIKSKLVSNRDHLMSLMRRQERNMYVLPIDD 307
           KT+  PF  +  +SE  ++GSCNGLICL    S                         DD
Sbjct: 98  KTLKTPFESV--LSEFEVVGSCNGLICLYDYFS-------------------------DD 130

Query: 306 PIYVYNPITRENQELPCFEFCNVGKNVEQVVCGFGXXXXXXXXXXXXXXFYKLDDGEDEN 127
           P+Y+YNP T E +ELP  E  +    + +VV GFG              +YK  + +   
Sbjct: 131 PLYIYNPFTIECRELPRVE-ASPHSVICRVVFGFGFHPKMEEYKVIKIVYYKQGNNDFSG 189

Query: 126 VFSEVRVYTLGTDTWRKL 73
              E  V T  T TWR +
Sbjct: 190 GAPEAFVLTANTPTWRNI 207


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