BLASTX nr result

ID: Coptis24_contig00023835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023835
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158047.1| PREDICTED: tryptophan synthase beta chain 2,...   431   e-118
ref|XP_004145103.1| PREDICTED: uncharacterized protein LOC101211...   431   e-118
emb|CBI23190.3| unnamed protein product [Vitis vinifera]              429   e-118
emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera]   429   e-118
ref|XP_003550500.1| PREDICTED: uncharacterized protein LOC100818...   426   e-117

>ref|XP_004158047.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Cucumis sativus]
          Length = 1563

 Score =  431 bits (1108), Expect = e-118
 Identities = 240/372 (64%), Positives = 271/372 (72%), Gaps = 1/372 (0%)
 Frame = +3

Query: 3    QLMVALPPLEDSVIINL-INNNKDNVDVDERQVCVDMKVRKRREPLRVVQMFKTNLSGQQ 179
            QLMVALP  +D+V + L      +NVDVD       M+V KRREPLR + M K+  SGQQ
Sbjct: 82   QLMVALPVPQDAVQVELRYREEAENVDVD-------MRVLKRREPLRAMTMAKSAGSGQQ 134

Query: 180  SDGIGVLIRLIRSNXXXXXXXXSGDNRFFGFAEHWKTXXXXXXXXXXXXXXXXELTQLPL 359
            +DG+GVL RL+RS+        +  +    F EHWKT                +LT+LPL
Sbjct: 135  NDGVGVLTRLLRSSLAPTVPGAA--DAVIDFGEHWKTVTMLNLSGCGLLALPADLTRLPL 192

Query: 360  VEKLYLENNKLSVLPPELGELKNLKVLRVDYNFLVSVPVELRQCVGLVELSLEHNKLVRP 539
            +EKLYLENNKL+VLPPELGE+KNLKVLRVD+NFLVSVPVELRQCVGLVELSLEHNKLVRP
Sbjct: 193  LEKLYLENNKLTVLPPELGEIKNLKVLRVDFNFLVSVPVELRQCVGLVELSLEHNKLVRP 252

Query: 540  LLDFRAMSELCVLRLFGNPLEFLPEILPLHKLRHLSLANIRIEADDNLKSVNVQIETENT 719
            LLDFRAM+EL VLRLFGNPLEFLPEILPLHKLRHLSLANIRI AD+NL+SV+VQIE EN 
Sbjct: 253  LLDFRAMAELRVLRLFGNPLEFLPEILPLHKLRHLSLANIRIVADENLRSVDVQIEMENN 312

Query: 720  SYFIASRHNXXXXXXXXXXXXXCHHPLLASALAKIMQDHGNRAFVGKDENAVRQLISMIS 899
            SYF ASRH              CHHPLLASALAKIMQD GNRA + KDENA+ QLISMIS
Sbjct: 313  SYFGASRHKLSAFFSLIFRFSSCHHPLLASALAKIMQDEGNRAVISKDENAIHQLISMIS 372

Query: 900  SGNRHVVEQXXXXXXXXXXXXXXXMQLIKSDIMQPIESVLKSLVPEEVISVLQVVVNLAF 1079
            S NRHVV Q               MQL+K+DIMQPI+SVLKS+  +EVISVL VV  LAF
Sbjct: 373  SENRHVVVQACFALSSLAADVSIAMQLMKADIMQPIKSVLKSVSQDEVISVLHVVAKLAF 432

Query: 1080 ASDSVAQKMLTK 1115
             SD+VAQKMLTK
Sbjct: 433  TSDTVAQKMLTK 444


>ref|XP_004145103.1| PREDICTED: uncharacterized protein LOC101211840 [Cucumis sativus]
            gi|449471727|ref|XP_004153391.1| PREDICTED: tryptophan
            synthase beta chain 2, chloroplastic-like [Cucumis
            sativus]
          Length = 1328

 Score =  431 bits (1108), Expect = e-118
 Identities = 240/372 (64%), Positives = 271/372 (72%), Gaps = 1/372 (0%)
 Frame = +3

Query: 3    QLMVALPPLEDSVIINL-INNNKDNVDVDERQVCVDMKVRKRREPLRVVQMFKTNLSGQQ 179
            QLMVALP  +D+V + L      +NVDVD       M+V KRREPLR + M K+  SGQQ
Sbjct: 82   QLMVALPVPQDAVQVELRYREEAENVDVD-------MRVLKRREPLRAMTMAKSAGSGQQ 134

Query: 180  SDGIGVLIRLIRSNXXXXXXXXSGDNRFFGFAEHWKTXXXXXXXXXXXXXXXXELTQLPL 359
            +DG+GVL RL+RS+        +  +    F EHWKT                +LT+LPL
Sbjct: 135  NDGVGVLTRLLRSSLAPTVPGAA--DAVIDFGEHWKTVTMLNLSGCGLLALPADLTRLPL 192

Query: 360  VEKLYLENNKLSVLPPELGELKNLKVLRVDYNFLVSVPVELRQCVGLVELSLEHNKLVRP 539
            +EKLYLENNKL+VLPPELGE+KNLKVLRVD+NFLVSVPVELRQCVGLVELSLEHNKLVRP
Sbjct: 193  LEKLYLENNKLTVLPPELGEIKNLKVLRVDFNFLVSVPVELRQCVGLVELSLEHNKLVRP 252

Query: 540  LLDFRAMSELCVLRLFGNPLEFLPEILPLHKLRHLSLANIRIEADDNLKSVNVQIETENT 719
            LLDFRAM+EL VLRLFGNPLEFLPEILPLHKLRHLSLANIRI AD+NL+SV+VQIE EN 
Sbjct: 253  LLDFRAMAELRVLRLFGNPLEFLPEILPLHKLRHLSLANIRIVADENLRSVDVQIEMENN 312

Query: 720  SYFIASRHNXXXXXXXXXXXXXCHHPLLASALAKIMQDHGNRAFVGKDENAVRQLISMIS 899
            SYF ASRH              CHHPLLASALAKIMQD GNRA + KDENA+ QLISMIS
Sbjct: 313  SYFGASRHKLSAFFSLIFRFSSCHHPLLASALAKIMQDEGNRAVISKDENAIHQLISMIS 372

Query: 900  SGNRHVVEQXXXXXXXXXXXXXXXMQLIKSDIMQPIESVLKSLVPEEVISVLQVVVNLAF 1079
            S NRHVV Q               MQL+K+DIMQPI+SVLKS+  +EVISVL VV  LAF
Sbjct: 373  SENRHVVVQACFALSSLAADVSIAMQLMKADIMQPIKSVLKSVSQDEVISVLHVVAKLAF 432

Query: 1080 ASDSVAQKMLTK 1115
             SD+VAQKMLTK
Sbjct: 433  TSDTVAQKMLTK 444


>emb|CBI23190.3| unnamed protein product [Vitis vinifera]
          Length = 1286

 Score =  429 bits (1104), Expect = e-118
 Identities = 246/371 (66%), Positives = 267/371 (71%)
 Frame = +3

Query: 3    QLMVALPPLEDSVIINLINNNKDNVDVDERQVCVDMKVRKRREPLRVVQMFKTNLSGQQS 182
            QLMVALP  +DSV++ L        +V      VDMKV KRR+PLRVV+M KT  SGQQS
Sbjct: 64   QLMVALPMPQDSVVVQLKEGEGGGDNVG-----VDMKVVKRRDPLRVVKMSKTVGSGQQS 118

Query: 183  DGIGVLIRLIRSNXXXXXXXXSGDNRFFGFAEHWKTXXXXXXXXXXXXXXXXELTQLPLV 362
            DGIGV+ RL+RS         +         EHW                  E TQL L+
Sbjct: 119  DGIGVVTRLMRSTVKDGVAACN---------EHWNNVTVLNFCGCSLSVFPVEFTQLMLL 169

Query: 363  EKLYLENNKLSVLPPELGELKNLKVLRVDYNFLVSVPVELRQCVGLVELSLEHNKLVRPL 542
            EKL L+NNKLSVLP ELG+LKNLKVLRVD N LVSVPVELRQCV LVELSLEHNKLVRPL
Sbjct: 170  EKLCLDNNKLSVLPSELGKLKNLKVLRVDNNMLVSVPVELRQCVELVELSLEHNKLVRPL 229

Query: 543  LDFRAMSELCVLRLFGNPLEFLPEILPLHKLRHLSLANIRIEADDNLKSVNVQIETENTS 722
            LDFRAM+EL VLRLFGNPLEFLPEILPLHKLRHLSLANIRI AD+ L+SVNVQIE EN+S
Sbjct: 230  LDFRAMAELRVLRLFGNPLEFLPEILPLHKLRHLSLANIRIVADELLRSVNVQIEMENSS 289

Query: 723  YFIASRHNXXXXXXXXXXXXXCHHPLLASALAKIMQDHGNRAFVGKDENAVRQLISMISS 902
            YFIASRH              CHHPLLASALAKIMQD GNRA VGKDENA+RQLISMISS
Sbjct: 290  YFIASRHRLSAFFSLIFRFSSCHHPLLASALAKIMQDEGNRAVVGKDENAMRQLISMISS 349

Query: 903  GNRHVVEQXXXXXXXXXXXXXXXMQLIKSDIMQPIESVLKSLVPEEVISVLQVVVNLAFA 1082
             NRHVVEQ               MQL+KSDIMQPI+ VLKS+ PEE+ISVLQVVVNLAFA
Sbjct: 350  DNRHVVEQACSALSSLAMDVPVAMQLMKSDIMQPIQRVLKSVAPEELISVLQVVVNLAFA 409

Query: 1083 SDSVAQKMLTK 1115
            SD VAQKMLTK
Sbjct: 410  SDMVAQKMLTK 420


>emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera]
          Length = 1286

 Score =  429 bits (1103), Expect = e-118
 Identities = 245/371 (66%), Positives = 267/371 (71%)
 Frame = +3

Query: 3    QLMVALPPLEDSVIINLINNNKDNVDVDERQVCVDMKVRKRREPLRVVQMFKTNLSGQQS 182
            QLMVALP  +DSV++ L        +V      VDMKV KRR+PLRVV+M KT  SGQQS
Sbjct: 64   QLMVALPMPQDSVVVQLKEGEGGGDNVG-----VDMKVVKRRDPLRVVKMSKTVGSGQQS 118

Query: 183  DGIGVLIRLIRSNXXXXXXXXSGDNRFFGFAEHWKTXXXXXXXXXXXXXXXXELTQLPLV 362
            DGIGV+ RL+RS         +         EHW                  E TQL L+
Sbjct: 119  DGIGVVTRLMRSTVKDGVAACN---------EHWNNVTVLNFCGCSLSVFPVEFTQLMLL 169

Query: 363  EKLYLENNKLSVLPPELGELKNLKVLRVDYNFLVSVPVELRQCVGLVELSLEHNKLVRPL 542
            EKL L+NNKLSVLP ELG+LKNLKVLRVD N LVSVPVELRQCV LVELSLEHNKLVRPL
Sbjct: 170  EKLCLDNNKLSVLPSELGKLKNLKVLRVDNNMLVSVPVELRQCVELVELSLEHNKLVRPL 229

Query: 543  LDFRAMSELCVLRLFGNPLEFLPEILPLHKLRHLSLANIRIEADDNLKSVNVQIETENTS 722
            LDFRAM+E+ VLRLFGNPLEFLPEILPLHKLRHLSLANIRI AD+ L+SVNVQIE EN+S
Sbjct: 230  LDFRAMAEJRVLRLFGNPLEFLPEILPLHKLRHLSLANIRIVADELLRSVNVQIEMENSS 289

Query: 723  YFIASRHNXXXXXXXXXXXXXCHHPLLASALAKIMQDHGNRAFVGKDENAVRQLISMISS 902
            YFIASRH              CHHPLLASALAKIMQD GNRA VGKDENA+RQLISMISS
Sbjct: 290  YFIASRHRLSAFFSLIFRFSSCHHPLLASALAKIMQDEGNRAVVGKDENAMRQLISMISS 349

Query: 903  GNRHVVEQXXXXXXXXXXXXXXXMQLIKSDIMQPIESVLKSLVPEEVISVLQVVVNLAFA 1082
             NRHVVEQ               MQL+KSDIMQPI+ VLKS+ PEE+ISVLQVVVNLAFA
Sbjct: 350  DNRHVVEQACSALSSLAMDVPVAMQLMKSDIMQPIQRVLKSVAPEELISVLQVVVNLAFA 409

Query: 1083 SDSVAQKMLTK 1115
            SD VAQKMLTK
Sbjct: 410  SDMVAQKMLTK 420


>ref|XP_003550500.1| PREDICTED: uncharacterized protein LOC100818519 [Glycine max]
          Length = 1333

 Score =  426 bits (1094), Expect = e-117
 Identities = 238/371 (64%), Positives = 265/371 (71%)
 Frame = +3

Query: 3    QLMVALPPLEDSVIINLINNNKDNVDVDERQVCVDMKVRKRREPLRVVQMFKTNLSGQQS 182
            QLMVALP  +D+V++ L +      D DE  V + MKV KRREPLR V M K   SGQQS
Sbjct: 86   QLMVALPMPQDTVVVELRSR-----DDDENVVDLGMKVVKRREPLRAVTMAKAVASGQQS 140

Query: 183  DGIGVLIRLIRSNXXXXXXXXSGDNRFFGFAEHWKTXXXXXXXXXXXXXXXXELTQLPLV 362
            DG GVLIRL+RS+         GD    G   HW +                ELTQLP +
Sbjct: 141  DGTGVLIRLLRSDLPSSTPPKVGDAAVAGSGHHWTSLAALSLCGCGLSVLPVELTQLPRL 200

Query: 363  EKLYLENNKLSVLPPELGELKNLKVLRVDYNFLVSVPVELRQCVGLVELSLEHNKLVRPL 542
            EKLYL+NN+L+VLPPELGEL++LKVLR+D N LVSVP ELRQC+ LVELSLEHNKLVRPL
Sbjct: 201  EKLYLDNNRLTVLPPELGELRSLKVLRIDNNMLVSVPAELRQCMQLVELSLEHNKLVRPL 260

Query: 543  LDFRAMSELCVLRLFGNPLEFLPEILPLHKLRHLSLANIRIEADDNLKSVNVQIETENTS 722
            LDFRAM+EL VLRLFGNPLEFLPEILPLHKLRHLSLANIRI AD+NL+SVNVQIE EN+S
Sbjct: 261  LDFRAMAELRVLRLFGNPLEFLPEILPLHKLRHLSLANIRIVADENLRSVNVQIEMENSS 320

Query: 723  YFIASRHNXXXXXXXXXXXXXCHHPLLASALAKIMQDHGNRAFVGKDENAVRQLISMISS 902
            YF ASRH              CHHPLLASAL KIMQD GNR FVGKDENAVRQLISMISS
Sbjct: 321  YFGASRHKLSAVFSLIFRFSSCHHPLLASALGKIMQDQGNRVFVGKDENAVRQLISMISS 380

Query: 903  GNRHVVEQXXXXXXXXXXXXXXXMQLIKSDIMQPIESVLKSLVPEEVISVLQVVVNLAFA 1082
             N HVVEQ               + L+K+DIMQPI +VLKS   EEVISVLQVVV LAF 
Sbjct: 381  DNCHVVEQACSALSSLASDDSVALHLMKADIMQPIGTVLKSAGLEEVISVLQVVVQLAFT 440

Query: 1083 SDSVAQKMLTK 1115
            SD+VA+KMLTK
Sbjct: 441  SDTVAEKMLTK 451


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