BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023826
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [...   141   2e-31
ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communi...   126   7e-27
ref|XP_004141383.1| PREDICTED: WD repeat-containing protein 18-l...   124   3e-26
ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25
ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-l...   120   5e-25

>ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
           gi|302142303|emb|CBI19506.3| unnamed protein product
           [Vitis vinifera]
          Length = 448

 Score =  141 bits (356), Expect = 2e-31
 Identities = 70/103 (67%), Positives = 80/103 (77%)
 Frame = -1

Query: 745 WGLSEGRFLRTIEFPSIIDALALDPGEKSFFYGSRDGKIYIAALNGESSYSSSFGMHIIG 566
           W LS GR LR + FPSIIDA+ALDPGE  F+ GSRDGKIYIAALN   S S+S+GMHIIG
Sbjct: 207 WSLSTGRLLRNVVFPSIIDAIALDPGEHVFYAGSRDGKIYIAALNAVGSSSNSYGMHIIG 266

Query: 565 ALSEHSMAVSCLALNMDGNLLVSGLVDGTIRVWDTKTLQIVRM 437
           +LS+HS AV+CLA   DG LLVSG  DG +RVWDTKT  I R+
Sbjct: 267 SLSDHSKAVTCLAFATDGILLVSGSEDGMVRVWDTKTRNIFRI 309


>ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550902|gb|EEF52388.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 452

 Score =  126 bits (317), Expect = 7e-27
 Identities = 62/102 (60%), Positives = 76/102 (74%)
 Frame = -1

Query: 745 WGLSEGRFLRTIEFPSIIDALALDPGEKSFFYGSRDGKIYIAALNGESSYSSSFGMHIIG 566
           W LS+G  LR I FPSIID+LALDPGE  F+ G RDG IYIAALN +SS + S  +HIIG
Sbjct: 204 WSLSKGNLLRNIVFPSIIDSLALDPGENVFYAGCRDGNIYIAALNADSSSTKSHWLHIIG 263

Query: 565 ALSEHSMAVSCLALNMDGNLLVSGLVDGTIRVWDTKTLQIVR 440
           +LS HS  V+CLA + +GNLL++G  DG IRVWD ++  IVR
Sbjct: 264 SLSSHSKPVTCLAYSANGNLLLAGSEDGIIRVWDPRSHNIVR 305


>ref|XP_004141383.1| PREDICTED: WD repeat-containing protein 18-like [Cucumis sativus]
           gi|449531442|ref|XP_004172695.1| PREDICTED: WD
           repeat-containing protein 18-like [Cucumis sativus]
          Length = 451

 Score =  124 bits (312), Expect = 3e-26
 Identities = 59/103 (57%), Positives = 76/103 (73%)
 Frame = -1

Query: 745 WGLSEGRFLRTIEFPSIIDALALDPGEKSFFYGSRDGKIYIAALNGESSYSSSFGMHIIG 566
           W LS+G+ LR I FPSIIDA+ALDPGE  F+ G RDGKIY AALN +   SS +G+HI+G
Sbjct: 202 WSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSDYGLHILG 261

Query: 565 ALSEHSMAVSCLALNMDGNLLVSGLVDGTIRVWDTKTLQIVRM 437
           ++S  S +V+ LA    GNLL+SG  DG IRVWDT+T  ++R+
Sbjct: 262 SISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRV 304


>ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|222835469|gb|EEE73904.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  122 bits (306), Expect = 1e-25
 Identities = 61/103 (59%), Positives = 75/103 (72%)
 Frame = -1

Query: 745 WGLSEGRFLRTIEFPSIIDALALDPGEKSFFYGSRDGKIYIAALNGESSYSSSFGMHIIG 566
           W LS+G  LR I FPSIID++ LDPGE  F+ G RDGKI+IAAL  +SS   S  +HIIG
Sbjct: 203 WSLSKGILLRNIVFPSIIDSITLDPGEHVFYAGGRDGKIHIAALGADSSSIKSHWLHIIG 262

Query: 565 ALSEHSMAVSCLALNMDGNLLVSGLVDGTIRVWDTKTLQIVRM 437
           +LS HS  V+CLA + +GN+L+SG  DG IRVWD KT  IVR+
Sbjct: 263 SLSSHSKNVTCLAYSTNGNVLLSGSEDGMIRVWDPKTHNIVRV 305


>ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score =  120 bits (301), Expect = 5e-25
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = -1

Query: 745 WGLSEGRFLRTIEFPSIIDALALDPGEKSFFYGSRDGKIYIAALNGESSYSSSFGMHIIG 566
           W LS G  LR I FPSII+ +ALDP E  F+ GS DGKI+IAALN ES  ++++GMHIIG
Sbjct: 202 WSLSRGMLLRNIVFPSIINCIALDPAEHVFYAGSEDGKIFIAALNTESITTNNYGMHIIG 261

Query: 565 ALSEHSMAVSCLALNMDGNLLVSGLVDGTIRVWDTKTLQIVRM 437
           + S HS  V+CLA     NLL++G  DG +RVW+ +T  IVRM
Sbjct: 262 SFSNHSNQVTCLAYGTSENLLITGSEDGMVRVWNARTRNIVRM 304