BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023825
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [...   145   4e-33
ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communi...   129   3e-28
ref|XP_004141383.1| PREDICTED: WD repeat-containing protein 18-l...   127   1e-27
ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-l...   124   6e-27

>ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
           gi|302142303|emb|CBI19506.3| unnamed protein product
           [Vitis vinifera]
          Length = 448

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/105 (68%), Positives = 83/105 (79%)
 Frame = -3

Query: 377 KVWGLSGGRFLRTIEFPSIIDALALDPGEKSFFAGSRDGKIYIAALNGESTSSSSFGMHI 198
           KVW LS GR LR + FPSIIDA+ALDPGE  F+AGSRDGKIYIAALN   +SS+S+GMHI
Sbjct: 205 KVWSLSTGRLLRNVVFPSIIDAIALDPGEHVFYAGSRDGKIYIAALNAVGSSSNSYGMHI 264

Query: 197 IGALSEHSTAVSCLALNMDGNLLVSGLVDGTICVWDTKTLQIVRM 63
           IG+LS+HS AV+CLA   DG LLVSG  DG + VWDTKT  I R+
Sbjct: 265 IGSLSDHSKAVTCLAFATDGILLVSGSEDGMVRVWDTKTRNIFRI 309


>ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550902|gb|EEF52388.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 452

 Score =  129 bits (324), Expect = 3e-28
 Identities = 64/104 (61%), Positives = 78/104 (75%)
 Frame = -3

Query: 377 KVWGLSGGRFLRTIEFPSIIDALALDPGEKSFFAGSRDGKIYIAALNGESTSSSSFGMHI 198
           KVW LS G  LR I FPSIID+LALDPGE  F+AG RDG IYIAALN +S+S+ S  +HI
Sbjct: 202 KVWSLSKGNLLRNIVFPSIIDSLALDPGENVFYAGCRDGNIYIAALNADSSSTKSHWLHI 261

Query: 197 IGALSEHSTAVSCLALNMDGNLLVSGLVDGTICVWDTKTLQIVR 66
           IG+LS HS  V+CLA + +GNLL++G  DG I VWD ++  IVR
Sbjct: 262 IGSLSSHSKPVTCLAYSANGNLLLAGSEDGIIRVWDPRSHNIVR 305


>ref|XP_004141383.1| PREDICTED: WD repeat-containing protein 18-like [Cucumis sativus]
           gi|449531442|ref|XP_004172695.1| PREDICTED: WD
           repeat-containing protein 18-like [Cucumis sativus]
          Length = 451

 Score =  127 bits (319), Expect = 1e-27
 Identities = 61/105 (58%), Positives = 77/105 (73%)
 Frame = -3

Query: 377 KVWGLSGGRFLRTIEFPSIIDALALDPGEKSFFAGSRDGKIYIAALNGESTSSSSFGMHI 198
           KVW LS G+ LR I FPSIIDA+ALDPGE  F+ G RDGKIY AALN +  SSS +G+HI
Sbjct: 200 KVWSLSKGKLLRNIIFPSIIDAIALDPGEHVFYGGGRDGKIYTAALNAKCPSSSDYGLHI 259

Query: 197 IGALSEHSTAVSCLALNMDGNLLVSGLVDGTICVWDTKTLQIVRM 63
           +G++S  S +V+ LA    GNLL+SG  DG I VWDT+T  ++R+
Sbjct: 260 LGSISNQSKSVTSLAYCSSGNLLISGSEDGAIRVWDTRTNNVIRV 304


>ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|222835469|gb|EEE73904.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/105 (60%), Positives = 77/105 (73%)
 Frame = -3

Query: 377 KVWGLSGGRFLRTIEFPSIIDALALDPGEKSFFAGSRDGKIYIAALNGESTSSSSFGMHI 198
           KVW LS G  LR I FPSIID++ LDPGE  F+AG RDGKI+IAAL  +S+S  S  +HI
Sbjct: 201 KVWSLSKGILLRNIVFPSIIDSITLDPGEHVFYAGGRDGKIHIAALGADSSSIKSHWLHI 260

Query: 197 IGALSEHSTAVSCLALNMDGNLLVSGLVDGTICVWDTKTLQIVRM 63
           IG+LS HS  V+CLA + +GN+L+SG  DG I VWD KT  IVR+
Sbjct: 261 IGSLSSHSKNVTCLAYSTNGNVLLSGSEDGMIRVWDPKTHNIVRV 305


>ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/105 (57%), Positives = 76/105 (72%)
 Frame = -3

Query: 377 KVWGLSGGRFLRTIEFPSIIDALALDPGEKSFFAGSRDGKIYIAALNGESTSSSSFGMHI 198
           KVW LS G  LR I FPSII+ +ALDP E  F+AGS DGKI+IAALN ES +++++GMHI
Sbjct: 200 KVWSLSRGMLLRNIVFPSIINCIALDPAEHVFYAGSEDGKIFIAALNTESITTNNYGMHI 259

Query: 197 IGALSEHSTAVSCLALNMDGNLLVSGLVDGTICVWDTKTLQIVRM 63
           IG+ S HS  V+CLA     NLL++G  DG + VW+ +T  IVRM
Sbjct: 260 IGSFSNHSNQVTCLAYGTSENLLITGSEDGMVRVWNARTRNIVRM 304